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r-remixed 1.1.2
Propagated dependencies: r-stringr@1.6.0 r-snow@0.4-4 r-rsmlx@2024.1.0 r-rmpfr@1.1-2 r-ggplot2@4.0.1 r-foreach@1.5.2 r-fastghquad@1.0.1 r-dplyr@1.1.4 r-dosnow@1.0.20 r-desolve@1.40
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=REMixed
Licenses: GPL 3+
Build system: r
Synopsis: Regularized Estimation in Mixed Effects Model
Description:

Implementation of an algorithm in two steps to estimate parameters of a model whose latent dynamics are inferred through latent processes, jointly regularized. This package uses Monolix software (<https://monolixsuite.slp-software.com/>), which provide robust statistical method for non-linear mixed effects modeling. Monolix must have been installed prior to use.

r-cardata 3.0-5
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://r-forge.r-project.org/projects/car/
Licenses: GPL 2+
Build system: r
Synopsis: Data sets for the book Companion to Applied Regression
Description:

This package provides datasets to accompany J. Fox and S. Weisberg, An R Companion to Applied Regression, Third Edition, Sage.

r-libcoin 1.0-10
Propagated dependencies: r-mvtnorm@1.3-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/libcoin
Licenses: GPL 2
Build system: r
Synopsis: Linear test statistics for permutation inference
Description:

This package provides basic infrastructure for linear test statistics and permutation inference in the framework of Strasser and Weber (1999).

r-poorman 0.2.7
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://nathaneastwood.github.io/poorman/
Licenses: Expat
Build system: r
Synopsis: Dependency-free recreation of dplyr
Description:

This package provides a replication of key functionality from dplyr and the wider tidyverse using only base.

rng-tools 6.17
Dependencies: libcap@2.64 sysfsutils@2.1.0 openssl@3.0.8
Channel: guix
Location: gnu/packages/linux.scm (gnu packages linux)
Home page: https://github.com/nhorman/rng-tools
Licenses: GPL 2 GPL 2+
Build system: gnu
Synopsis: Random number generator daemon
Description:

Monitor a hardware random number generator, and supply entropy from that to the system kernel's /dev/random machinery.

ruby-cbor 0.5.10.1
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: https://cbor.io/
Licenses: ASL 2.0
Build system: ruby
Synopsis: Concise Binary Object Representation
Description:

CBOR is a library for the CBOR format, based on Sadayuki Furuhashi's MessagePack library.

ruby-yell 2.2.2
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: https://github.com/rudionrails/yell
Licenses: Expat
Build system: ruby
Synopsis: Extensible logging library for Ruby
Description:

Yell is a comprehensive logging replacement for Ruby. It defines multiple adapters, various log level combinations and message formatting options.

r-fly-db0 3.22.0
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/f.scm (guix-bioc packages f)
Home page: https://bioconductor.org/packages/fly.db0
Licenses: Artistic License 2.0
Build system: r
Synopsis: Base Level Annotation databases for fly
Description:

Base annotation databases for fly, intended ONLY to be used by AnnotationDbi to produce regular annotation packages.

r-msstats 4.18.1
Propagated dependencies: r-survival@3.8-3 r-statmod@1.5.1 r-rlang@1.1.6 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-preprocesscore@1.72.0 r-plotly@4.11.0 r-msstatsconvert@1.20.0 r-mass@7.3-65 r-marray@1.88.0 r-lme4@1.1-37 r-limma@3.66.0 r-htmltools@0.5.8.1 r-gplots@3.2.0 r-ggrepel@0.9.6 r-ggplot2@4.0.1 r-data-table@1.17.8 r-checkmate@2.3.3
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: http://msstats.org
Licenses: Artistic License 2.0
Build system: r
Synopsis: Protein Significance Analysis in DDA, SRM and DIA for Label-free or Label-based Proteomics Experiments
Description:

This package provides a set of tools for statistical relative protein significance analysis in DDA, SRM and DIA experiments.

r-pig-db0 3.22.0
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pig.db0
Licenses: Artistic License 2.0
Build system: r
Synopsis: Base Level Annotation databases for pig
Description:

Base annotation databases for pig, intended ONLY to be used by AnnotationDbi to produce regular annotation packages.

r-abclass 0.5.1
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://wwenjie.org/abclass
Licenses: GPL 3+
Build system: r
Synopsis: Angle-Based Classification
Description:

Multi-category angle-based large-margin classifiers. See Zhang and Liu (2014) <doi:10.1093/biomet/asu017> for details.

r-bayesat 0.1.0
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=BayesAT
Licenses: GPL 3
Build system: r
Synopsis: Bayesian Adaptive Trial
Description:

Bayesian adaptive trial algorithm implements multiple-stage interim analysis. Package includes data generating function, and Bayesian hypothesis testing function.

r-barcode 1.4.0
Propagated dependencies: r-lattice@0.22-7
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=barcode
Licenses: GPL 2+
Build system: r
Synopsis: Render Barcode Distribution Plots
Description:

The function \codebarcode() produces a histogram-like plot of a distribution that shows granularity in the data.

r-daagbio 0.63-4
Propagated dependencies: r-limma@3.66.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/jhmaindonald/DAAGbio/
Licenses: GPL 2+
Build system: r
Synopsis: Data Sets and Functions, for Demonstrations with Expression Arrays and Gene Sequences
Description:

Data sets and functions, for the display of gene expression array (microarray) data, and for demonstrations with such data.

r-dematel 0.1.0
Propagated dependencies: r-knitr@1.50 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=dematel
Licenses: GPL 3
Build system: r
Synopsis: Decision Making Trial and Evaluation Laboratory Technique in R
Description:

Developed to Solve the Multi-Criteria Decision Making Problems with Decision Making Trial and Evaluation Laboratory Technique in R.

r-damiann 1.0.0
Propagated dependencies: r-testthat@3.3.0 r-caret@7.0-1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DamiaNN
Licenses: GPL 3
Build system: r
Synopsis: Neural Network Numerai
Description:

Interactively train neural networks on Numerai, <https://numer.ai/>, data. Generate tournament predictions and write them to a CSV.

r-eatgads 1.2.0
Propagated dependencies: r-tibble@3.3.0 r-stringi@1.8.7 r-plyr@1.8.9 r-hms@1.1.4 r-haven@2.5.5 r-eattools@0.7.9 r-eatdb@0.5.0 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/beckerbenj/eatGADS
Licenses: GPL 2+
Build system: r
Synopsis: Data Management of Large Hierarchical Data
Description:

Import SPSS data, handle and change SPSS meta data, store and access large hierarchical data in SQLite data bases.

r-easyreg 4.0
Propagated dependencies: r-nlme@3.1-168
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=easyreg
Licenses: GPL 2
Build system: r
Synopsis: Easy Regression
Description:

This package performs analysis of regression in simple designs with quantitative treatments, including mixed models and non linear models.

r-fastaft 1.4
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=fastAFT
Licenses: GPL 2+
Build system: r
Synopsis: Fast Regression for the Accelerated Failure Time (AFT) Model
Description:

Fast censored linear regression for the accelerated failure time (AFT) model of Huang (2013) <doi:10.1111/sjos.12031>.

r-gseavis 0.0.5
Propagated dependencies: r-tibble@3.3.0 r-stringr@1.6.0 r-reshape2@1.4.5 r-rcolorbrewer@1.1-3 r-purrr@1.2.0 r-magrittr@2.0.4 r-ggsci@4.1.0 r-ggrepel@0.9.6 r-ggpp@0.5.9 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-dose@4.4.0 r-aplot@0.2.9
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://github.com/junjunlab/GseaVis
Licenses: Expat
Build system: r
Synopsis: Implement for 'GSEA' Enrichment Visualization
Description:

Mark your interesting genes on plot and support more parameters to handle your own gene set enrichment analysis plot.

r-isoorbi 1.5.2
Propagated dependencies: r-withr@3.0.2 r-tidyselect@1.2.1 r-tidyr@1.3.1 r-tibble@3.3.0 r-scales@1.4.0 r-rlang@1.1.6 r-readxl@1.4.5 r-readr@2.1.6 r-purrr@1.2.0 r-prettyunits@1.2.0 r-openxlsx@4.2.8.1 r-lifecycle@1.0.4 r-knitr@1.50 r-glue@1.8.0 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-cli@3.6.5 r-arrow@22.0.0
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://isoorbi.isoverse.org/
Licenses: Expat
Build system: r
Synopsis: Process Orbitrap Isotopocule Data
Description:

Read and process isotopocule data from an Orbitrap Isotope Solutions mass spectrometer. Citation: Kantnerova et al. (Nature Protocols, 2024).

r-kernhaz 0.1.0
Propagated dependencies: r-rgl@1.3.31 r-ga@3.2.4 r-foreach@1.5.2 r-doparallel@1.0.17
Channel: guix-cran
Location: guix-cran/packages/k.scm (guix-cran packages k)
Home page: https://cran.r-project.org/package=kernhaz
Licenses: GPL 2+
Build system: r
Synopsis: Kernel Estimation of Hazard Function in Survival Analysis
Description:

Producing kernel estimates of the unconditional and conditional hazard function for right-censored data including methods of bandwidth selection.

r-l2boost 1.0.3
Propagated dependencies: r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=l2boost
Licenses: GPL 2+
Build system: r
Synopsis: Exploring Friedman's Boosting Algorithm for Regularized Linear Regression
Description:

Efficient implementation of Friedman's boosting algorithm with l2-loss function and coordinate direction (design matrix columns) basis functions.

r-minigui 0.8-1
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=miniGUI
Licenses: FSDG-compatible
Build system: r
Synopsis: Tcl/Tk Quick and Simple Function GUI
Description:

Quick and simple Tcl/Tk Graphical User Interface to call functions. Also comprises a very simple experimental GUI framework.

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