This package provides functions for conventionally formatting descriptive stats, reshaping data frames and formatting R output as HTML.

This package provides a database containing the names of the babies born in Quebec between 1980 and 2020.

Implementation of the shuffle estimator, a non-parametric estimator for signal and noise variance under mild noise correlations.

L2 penalized logistic regression for both continuous and discrete predictors, with forward stagewise/forward stepwise variable selection procedure.

This package provides a sparklyr extension that enables reading and writing TensorFlow TFRecord files via Apache Spark'.

This package provides more than 9900 annotated position frequency matrices from 14 public sources, for multiple organisms.

The unmodified Linux kernel, including nonfree blobs, for running Guix System on hardware which requires nonfree software to function.

Meta-analysis is widely used to summarize estimated effects sizes across multiple statistical tests. Standard fixed and random effect meta-analysis methods assume that the estimated of the effect sizes are statistically independent. Here we relax this assumption and enable meta-analysis when the correlation matrix between effect size estimates is known.

Improves simultaneous inference under dependence of tests by estimating a collapsed null distribution through resampling. Accounting for the dependence between tests increases the power while reducing the variability of the false discovery proportion. This dependence is common in genomics applications, e.g. when combining flow cytometry measurements with microbiome sequence counts.

This package provides tools for preprocessing and processing canopy photographs with support for raw data reading. Provides methods to address variability in sky brightness and to mitigate errors from image acquisition in non-diffuse light. Works with all types of fish-eye lenses, and some methods also apply to conventional lenses.

This package provides tools for randomization-based inference. Current focus is on the d^2 omnibus test of differences of means following Hansen and Bowers (2008) <doi:10.1214/08-STS254> . This test is useful for assessing balance in matched observational studies or for analysis of outcomes in block-randomized experiments.

The APT Package Management System provides Debian and Debian-derived Linux systems with a powerful system to resolve package dependencies. This package offers access directly from R. This can only work on a system with a suitable libapt-pkg-dev installation so functionality is curtailed if such a library is not found.

Encode network data as strings of printable ASCII characters. Implemented functions include encoding and decoding adjacency matrices, edgelists, igraph, and network objects to/from formats graph6', sparse6', and digraph6'. The formats and methods are described in McKay, B.D. and Piperno, A (2014) <doi:10.1016/j.jsc.2013.09.003>.

Easily download datasets from Kaggle <https://www.kaggle.com/> directly into your R environment using RKaggle'. Streamline your data analysis workflows by importing datasets effortlessly and focusing on insights rather than manual data handling. Perfect for data enthusiasts and professionals looking to integrate Kaggle datasets into their R projects with minimal hassle.

Implementation of an algorithm in two steps to estimate parameters of a model whose latent dynamics are inferred through latent processes, jointly regularized. This package uses Monolix software (<https://monolixsuite.slp-software.com/>), which provide robust statistical method for non-linear mixed effects modeling. Monolix must have been installed prior to use.

This package provides basic infrastructure for linear test statistics and permutation inference in the framework of Strasser and Weber (1999).

This package provides a replication of key functionality from dplyr and the wider tidyverse using only base.

This package provides datasets to accompany J. Fox and S. Weisberg, An R Companion to Applied Regression, Third Edition, Sage.

Monitor a hardware random number generator, and supply entropy from that to the system kernel's /dev/random machinery.

Yell is a comprehensive logging replacement for Ruby. It defines multiple adapters, various log level combinations and message formatting options.

CBOR is a library for the CBOR format, based on Sadayuki Furuhashi's MessagePack library.

Base annotation databases for fly, intended ONLY to be used by AnnotationDbi to produce regular annotation packages.

This package provides a set of tools for statistical relative protein significance analysis in DDA, SRM and DIA experiments.

Base annotation databases for pig, intended ONLY to be used by AnnotationDbi to produce regular annotation packages.