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r-ggraptr 1.3
Propagated dependencies: r-shiny@1.11.1 r-purrr@1.2.0 r-pacman@0.5.1 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=ggraptR
Licenses: GPL 2+
Build system: r
Synopsis: Allows Interactive Visualization of Data Through a Web Browser GUI
Description:

Intended for both technical and non-technical users to create interactive data visualizations through a web browser GUI without writing any code.

r-hlidacr 0.2.0
Propagated dependencies: r-usethis@3.2.1 r-urltools@1.7.3.1 r-stringr@1.6.0 r-purrr@1.2.0 r-jsonlite@2.0.0 r-httr@1.4.7 r-glue@1.8.0 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/skvrnami/hlidacr
Licenses: Expat
Build system: r
Synopsis: Access Data from the 'Hlídač Státu' API
Description:

This package provides access to datasets published by Hlà daÄ státu <https://www.hlidacstatu.cz/>, a Czech watchdog, via their API.

r-irtrees 1.0.0
Propagated dependencies: r-tidyr@1.3.1 r-diagrammer@1.0.11
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=irtrees
Licenses: GPL 2+
Build system: r
Synopsis: Estimation of Tree-Based Item Response Models
Description:

Helper functions and example data sets to facilitate the estimation of IRTree models from data with different shape and using different software.

r-jmvcore 2.7.7
Propagated dependencies: r-rlang@1.1.6 r-r6@2.6.1 r-jsonlite@2.0.0 r-base64enc@0.1-3
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://www.jamovi.org
Licenses: GPL 2+
Build system: r
Synopsis: Dependencies for the 'jamovi' Framework
Description:

This package provides a framework for creating rich interactive analyses for the jamovi platform (see <https://www.jamovi.org> for more information).

r-jcvrisk 0.1.3
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=Jcvrisk
Licenses: Expat
Build system: r
Synopsis: Risk Calculator for Cardiovascular Disease in Japan
Description:

This package provides a calculation tool to obtain the 5-year or 10-year risk of cardiovascular disease from various risk models.

r-metamer 0.3.0
Propagated dependencies: r-progress@1.2.3 r-fnn@1.1.4.1
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://eliocamp.github.io/metamer/
Licenses: GPL 3
Build system: r
Synopsis: Create Data with Identical Statistics
Description:

This package creates data with identical statistics (metamers) using an iterative algorithm proposed by Matejka & Fitzmaurice (2017) <DOI:10.1145/3025453.3025912>.

r-margins 0.3.28
Propagated dependencies: r-prediction@0.3.18 r-mass@7.3-65 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/bbolker/margins
Licenses: Expat
Build system: r
Synopsis: Marginal Effects for Model Objects
Description:

An R port of the margins command from Stata', which can be used to calculate marginal (or partial) effects from model objects.

r-otbsegm 0.1.2
Propagated dependencies: r-terra@1.8-86 r-link2gi@0.7-2 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cidree.github.io/OTBsegm/
Licenses: Expat
Build system: r
Synopsis: Apply Unsupervised Segmentation Algorithms from 'OTB'
Description:

Apply unsupervised segmentation algorithms included in Orfeo ToolBox software (<https://www.orfeo-toolbox.org/>), such as mean shift or watershed segmentation.

r-pairsd3 0.1.3
Propagated dependencies: r-shiny@1.11.1 r-htmlwidgets@1.6.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/garthtarr/pairsD3/
Licenses: GPL 3+
Build system: r
Synopsis: D3 Scatterplot Matrices
Description:

This package creates an interactive scatterplot matrix using the D3 JavaScript library. See <https://d3js.org/> for more information on D3.

r-sensiat 0.3.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-survival@3.8-3 r-rlang@1.1.6 r-rcpp@1.1.0 r-purrr@1.2.0 r-pracma@2.4.6 r-orthogonalsplinebasis@0.1.7 r-mave@1.3.12 r-mass@7.3-65 r-kernsmooth@2.23-26 r-glue@1.8.0 r-ggplot2@4.0.1 r-generics@0.1.4 r-dplyr@1.1.4 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/UofUEpiBio/SensIAT
Licenses: Expat
Build system: r
Synopsis: Sensitivity Analysis for Irregular Assessment Times
Description:

Sensitivity analysis for trials with irregular and informative assessment times, based on a new influence function-based, augmented inverse intensity-weighted estimator.

r-sperich 1.5-9
Propagated dependencies: r-sp@2.2-0 r-raster@3.6-32 r-foreach@1.5.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sperich
Licenses: GPL 2+
Build system: r
Synopsis: Auxiliary Functions to Estimate Centers of Biodiversity
Description:

This package provides some easy-to-use functions to interpolate species range based on species occurrences and to estimate centers of biodiversity.

r-traktok 0.1.1
Propagated dependencies: r-tibble@3.3.0 r-rvest@1.0.5 r-rlang@1.1.6 r-purrr@1.2.0 r-openssl@2.3.4 r-lobstr@1.1.3 r-jsonlite@2.0.0 r-httr2@1.2.1 r-glue@1.8.0 r-dplyr@1.1.4 r-curl@7.0.0 r-cookiemonster@0.1.0 r-cli@3.6.5 r-askpass@1.2.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/JBGruber/traktok
Licenses: GPL 3+
Build system: r
Synopsis: Collecting 'TikTok' Data
Description:

Getting TikTok data (<https://www.tiktok.com/>) through the official and unofficial APIsâ in other words, you can track TikTok'.

r-tabulog 0.1.1
Propagated dependencies: r-yaml@2.3.10
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tabulog
Licenses: Expat
Build system: r
Synopsis: Parsing Semi-Structured Log Files into Tabular Format
Description:

Convert semi-structured log files (such as Apache access.log files) into a tabular format (data.frame) using a standard template system.

r-votesys 0.1.1
Propagated dependencies: r-matrix@1.7-4 r-gtools@3.9.5 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=votesys
Licenses: GPL 3
Build system: r
Synopsis: Voting Systems, Instant-Runoff Voting, Borda Method, Various Condorcet Methods
Description:

Various methods to count ballots in voting systems are provided. Functions to check validity of ballots are also provided to ensure flexibility.

r-vembedr 0.1.5
Propagated dependencies: r-stringr@1.6.0 r-magrittr@2.0.4 r-lifecycle@1.0.4 r-httr@1.4.7 r-htmltools@0.5.8.1 r-glue@1.8.0 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/ijlyttle/vembedr
Licenses: Expat
Build system: r
Synopsis: Embed Video in HTML
Description:

This package provides a set of functions for generating HTML to embed hosted video in your R Markdown documents or Shiny applications.

r-rarpack 0.11-0
Propagated dependencies: r-rspectra@0.16-2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/yixuan/rARPACK
Licenses: Modified BSD
Build system: r
Synopsis: Solvers for large scale eigenvalue and SVD problems
Description:

This package was previously an R wrapper of the ARPACK library, and now a shell of the R package RSpectra, an R interface to the Spectra library for solving large scale eigenvalue/vector problems. The current version of rARPACK simply imports and exports the functions provided by RSpectra. New users of rARPACK are advised to switch to the RSpectra package.

r-gemma-r 3.6.1
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-summarizedexperiment@1.40.0 r-stringr@1.6.0 r-s4vectors@0.48.0 r-rlang@1.1.6 r-rappdirs@0.3.3 r-r-utils@2.13.0 r-memoise@2.0.1 r-magrittr@2.0.4 r-lubridate@1.9.4 r-kableextra@1.4.0 r-jsonlite@2.0.0 r-httr@1.4.7 r-glue@1.8.0 r-digest@0.6.39 r-data-table@1.17.8 r-bit64@4.6.0-1 r-biobase@2.70.0 r-base64enc@0.1-3 r-assertthat@0.2.1
Channel: guix-bioc
Location: guix-bioc/packages/g.scm (guix-bioc packages g)
Home page: https://pavlidislab.github.io/gemma.R/
Licenses: FSDG-compatible
Build system: r
Synopsis: wrapper for Gemma's Restful API to access curated gene expression data and differential expression analyses
Description:

Low- and high-level wrappers for Gemma's RESTful API. They enable access to curated expression and differential expression data from over 10,000 published studies. Gemma is a web site, database and a set of tools for the meta-analysis, re-use and sharing of genomics data, currently primarily targeted at the analysis of gene expression profiles.

r-rnamodr 1.24.0
Propagated dependencies: r-txdbmaker@1.6.0 r-seqinfo@1.0.0 r-s4vectors@0.48.0 r-rtracklayer@1.70.0 r-rsamtools@2.26.0 r-rocr@1.0-11 r-reshape2@1.4.5 r-rcolorbrewer@1.1-3 r-modstrings@1.26.0 r-matrixstats@1.5.0 r-iranges@2.44.0 r-gviz@1.54.0 r-ggplot2@4.0.1 r-genomicranges@1.62.0 r-genomicfeatures@1.62.0 r-genomicalignments@1.46.0 r-colorramps@2.3.4 r-bsgenome@1.78.0 r-biostrings@2.78.0 r-biocparallel@1.44.0 r-biocgenerics@0.56.0
Channel: guix-bioc
Location: guix-bioc/packages/r.scm (guix-bioc packages r)
Home page: https://github.com/FelixErnst/RNAmodR
Licenses: Artistic License 2.0
Build system: r
Synopsis: Detection of post-transcriptional modifications in high throughput sequencing data
Description:

RNAmodR provides classes and workflows for loading/aggregation data from high througput sequencing aimed at detecting post-transcriptional modifications through analysis of specific patterns. In addition, utilities are provided to validate and visualize the results. The RNAmodR package provides a core functionality from which specific analysis strategies can be easily implemented as a seperate package.

r-rstatix 0.7.3
Propagated dependencies: r-broom@1.0.10 r-car@3.1-3 r-corrplot@0.95 r-dplyr@1.1.4 r-generics@0.1.4 r-magrittr@2.0.4 r-purrr@1.2.0 r-rlang@1.1.6 r-tibble@3.3.0 r-tidyr@1.3.1 r-tidyselect@1.2.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://rpkgs.datanovia.com/rstatix/
Licenses: GPL 2
Build system: r
Synopsis: Pipe-friendly framework for basic statistical tests
Description:

This package provides a simple and intuitive pipe-friendly framework, coherent with the tidyverse design philosophy, for performing basic statistical tests, including t-test, Wilcoxon test, ANOVA, Kruskal-Wallis and correlation analyses. The output of each test is automatically transformed into a tidy data frame to facilitate visualization. Additional functions are available for reshaping, reordering, manipulating and visualizing correlation matrix.

r-ronfhir 0.4.0
Propagated dependencies: r-stringr@1.6.0 r-r6@2.6.1 r-jsonlite@2.0.0 r-httr@1.4.7
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RonFHIR
Licenses: FSDG-compatible
Build system: r
Synopsis: Read and Search Interface to the 'HL7 FHIR' REST API
Description:

R on FHIR is an easy to use wrapper around the HL7 FHIR REST API (STU 3 and R4). It provides tools to easily read and search resources on a FHIR server and brings the results into the R environment. R on FHIR is based on the FhirClient of the official HL7 FHIR .NET API', also made by Firely.

r-rwofost 0.8-7
Propagated dependencies: r-rcpp@1.1.0 r-meteor@0.4-5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://CRAN.R-project.org/package=Rwofost
Licenses: GPL 3+
Build system: r
Synopsis: WOFOST Crop Growth Simulation Model
Description:

An implementation of the WOFOST ("World Food Studies") crop growth model. WOFOST is a dynamic simulation model that uses daily weather data, and crop, soil and management parameters to simulate crop growth and development. See De Wit et al. (2019) <doi:10.1016/j.agsy.2018.06.018> for a recent review of the history and use of the model.

r-rsvddpd 1.0.1
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-matrixstats@1.5.0 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/subroy13/rsvddpd
Licenses: Expat
Build system: r
Synopsis: Robust Singular Value Decomposition using Density Power Divergence
Description:

Computing singular value decomposition with robustness is a challenging task. This package provides an implementation of computing robust SVD using density power divergence (<doi:10.48550/arXiv.2109.10680>). It combines the idea of robustness and efficiency in estimation based on a tuning parameter. It also provides utility functions to simulate various scenarios to compare performances of different algorithms.

r-seqlogo 1.76.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/seqLogo
Licenses: LGPL 2.0+
Build system: r
Synopsis: Sequence logos for DNA sequence alignments
Description:

seqLogo takes the position weight matrix of a DNA sequence motif and plots the corresponding sequence logo as introduced by Schneider and Stephens (1990).

r-dnacopy 1.84.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/DNAcopy
Licenses: GPL 2+
Build system: r
Synopsis: DNA copy number data analysis
Description:

This package implements the circular binary segmentation (CBS) algorithm to segment DNA copy number data and identify genomic regions with abnormal copy number.

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