The df2yaml aims to simplify the process of converting dataframe to YAML <https://yaml.org/>. The dataframe with multiple key columns and one value column will be converted to the multi-level hierarchy.
This package provides methods for estimating multi-stage optimal dynamic treatment regimes for survival outcomes with dependent censoring. Cho, H., Holloway, S. T., and Kosorok, M. R. (2022) <doi:10.1093/biomet/asac047>.
Geodesic distance between phylogenetic trees and associated functions. The theoretical background of distory is published in Billera et al. (2001) "Geometry of the space of phylogenetic trees." <doi:10.1006/aama.2001.0759>.
Solves quadratic programming problems using Richard L. Dykstra's cyclic projection algorithm. Routine allows for a combination of equality and inequality constraints. See Dykstra (1983) <doi:10.1080/01621459.1983.10477029> for details.
This dataset contains population estimates of all European cities with at least 10,000 inhabitants during the period 1500-1800. These data are adapted from Jan De Vries, "European Urbanization, 1500-1800" (1984).
This package provides an interface to the Kairos Face Recognition API <https://kairos.com/face-recognition-api>. The API detects faces in images and returns estimates for demographics like gender, ethnicity and age.
This package provides a simple wrapper for Wikipedia data. Specifically, this package looks to fill a gap in retrieving text data in a tidy format that can be used for Natural Language Processing.
Homogenize GNSS (Global Navigation Satellite System) time-series. The general model is a segmentation in the mean model including a periodic function and considering monthly variances, see Quarello (2020) <arXiv:2005.04683>
.
Parameter estimation and prediction of Gaussian Process Classifier models as described in Bachoc et al. (2020) <doi:10.1007/S10898-020-00920-0>. Important functions : gpcm()
, predict.gpcm()
, update.gpcm()
.
Read hierarchical fixed width files like those commonly used by many census data providers. Also allows for reading of data in chunks, and reading gzipped files without storing the full file in memory.
This package provides functions to parse strings with ISO8601 dates, times, and date-times into R-objects. Additionally, there are functions to determine the type of ISO8601 string and to standardise ISO8601 strings.
Data sets for Chirok Han (2022, ISBN:979-11-303-1497-6, "Lectures on Econometrics"). Students, teachers, and self-learners will find the data sets essential for replicating the results in the book.
An interactive document on the topic of naive Bayes classification analysis using rmarkdown and shiny packages. Runtime examples are provided in the package function as well as at <https://kartikeyab.shinyapps.io/NBShiny/>.
Various visual and numerical diagnosis methods for the nonlinear mixed effect model, including visual predictive checks, numerical predictive checks, and coverage plots (Karlsson and Holford, 2008, <https://www.page-meeting.org/?abstract=1434>).
This package provides functions and data-sets that are helpful for teaching statistics and data analysis. It was originally designed for use when teaching students in the Psychology Department at Nottingham Trent University.
Simulation tools for planning Vitamin D studies. Individual vitamin D status profiles are simulated, modelling population heterogeneity in trial arms. Exposures to infectious agents are generated, with infection depending on vitamin D status.
Fast SVMlight reader and writer. SVMlight is most commonly used format for storing sparse matrices (possibly with some target variable) on disk. For additional information about SVMlight format see <http://svmlight.joachims.org/>.
This package provides tools for smoothing and tidying spatial features (i.e. lines and polygons) to make them more aesthetically pleasing. Smooth curves, fill holes, and remove small fragments from lines and polygons.
Higher Criticism (HC) test between two frequency tables. Test is based on an adaptation of the Tukey-Donoho-Jin HC statistic to testing frequency tables described in Kipnis (2019) <arXiv:1911.01208>
.
UpSet.js
is a re-implementation of UpSetR
to create interactive set visualizations for more than three sets. This is a htmlwidget wrapper around the JavaScript
library UpSet.js
'.
Some data treated by the Japanese R user require unique operations and processing. These are caused by address, Kanji, and traditional year representations. zipangu transforms specific to Japan into something more general one.
This package wraps common clustering algorithms in an easily extended S4 framework. Backends are implemented for hierarchical, k-means and graph-based clustering. Several utilities are also provided to compare and evaluate clustering results.
This package simulates the process of installing a package and then attaching it. This is a key part of the devtools
package as it allows you to rapidly iterate while developing a package.
This package implements list environments. List environments are environments that have list-like properties. For instance, the elements of a list environment are ordered and can be accessed and iterated over using index subsetting.