This package provides response time distributions (density/PDF, distribution function/CDF, quantile function, and random generation):
Ratcliff diffusion model (Ratcliff &
McKoon, 2008, <doi:10.1162/neco.2008.12-06-420>) based on C code by Andreas and Jochen Voss andlinear ballistic accumulator (LBA; Brown & Heathcote, 2008, <doi:10.1016/j.cogpsych.2007.12.002>) with different distributions underlying the drift rate.
This package provides a quantile regression method for multivariate data to find linear combinations of explanatory and response variables generalizing canonical correlation. The package consists of functions, rqcan() for fitting the coefficients, and summary.rqcan(), which calls a bootstrap function. For details, see the help files for rqcan() and summary.rqcan(), and the reference: Portnoy (2022) <doi:10.1016/j.jmva.2022.105071>.
Allows for production of Czekanowski's Diagrams with clusters. See K. Bartoszek, A. Vasterlund (2020) <doi:10.2478/bile-2020-0008> and K. Bartoszek, Y. Luo (2023) <doi:10.14708/ma.v51i2.7259>. The suggested FuzzyDBScan package (which allows for fuzzy clustering) can be obtained from <https://github.com/henrifnk/FuzzyDBScan/> (or from CRAN's Archive <https://cran.r-project.org/src/contrib/Archive/FuzzyDBScan/>).
Saves the delayed operations of a DelayedArray to a HDF5 file. This enables efficient recovery of the DelayedArray's contents in other languages and analysis frameworks.
This package provides a set of tools for interacting with GO and microarray data. A variety of basic manipulation tools for graphs, hypothesis testing and other simple calculations.
This package provides a dependency manager for R projects that allows you to manage the R packages your project depends on in an isolated, portable, and reproducible way.
This package provides functions to calculate: moments, Pearson's kurtosis, Geary's kurtosis and skewness; it also includes tests related to them (Anscombe-Glynn, D'Agostino, Bonett-Seier).
This package computes Hartigan's dip test statistic for unimodality, multimodality and provides a test with simulation based p-values, where the original public code has been corrected.
This package provides tools to compute polychoric and polyserial correlations by quick "two-step" methods or ML, optionally with standard errors; tetrachoric and biserial correlations are special cases.
This package provides text and label geometries for ggplot2 that help to avoid overlapping text labels. Labels repel away from each other and away from the data points.
reduceLCS is an implementation of the Reduce-Expand algorithm for LCS. It is a fast program to compute the approximate Longest Commons Subsequence of a set of strings.
Meta-data and tools to work with E. coli. The tools are mostly plotting functions to work with circular genomes. They can used with other genomes/plasmids.
This package provides efficient tools to read and integrate structural variations predicted by popular softwares. Annotation and visulation of structural variations are also implemented in the package.
An unofficial companion to "Applied Logistic Regression" by D.W. Hosmer, S. Lemeshow and R.X. Sturdivant (3rd ed., 2013) containing the dataset used in the book.
This package provides a Bayesian, global planktic foraminifera core top calibration to modern sea-surface temperatures. Includes four calibration models, considering species-specific calibration parameters and seasonality.
Make Bootstrap 4 Shiny dashboards. Use the full power of AdminLTE3', a dashboard template built on top of Bootstrap 4 <https://github.com/ColorlibHQ/AdminLTE>.
Design, workflow and statistical analysis of Cluster Randomised Trials of (health) interventions where there may be spillover between the arms (see <https://thomasasmith.github.io/index.html>).
Changing the name of an existing R package is annoying but common task especially in the early stages of package development. This package (mostly) automates this task.
Model-based clustering of mixed data (i.e. data which consist of continuous, binary, ordinal or nominal variables) using a parsimonious mixture of latent Gaussian variable models.
Scientific and technical article format for the web. Distill articles feature attractive, reader-friendly typography, flexible layout options for visualizations, and full support for footnotes and citations.
Provision of classes and methods for estimating generalized orthogonal GARCH models. This is an alternative approach to CC-GARCH models in the context of multivariate volatility modeling.
Extends ggplot2 functionality to the partykit package. ggparty provides the necessary tools to create clearly structured and highly customizable visualizations for tree-objects of the class party'.
This package provides a collection of datasets for the upcoming book "Graficas versatiles con ggplot: Analisis visuales de datos", by Raymond L. Tremblay and Julian Hernandez-Serano.
This package provides helpers to add Git links to shiny applications, rmarkdown documents, and other HTML based resources. This is most commonly used for GitHub ribbons.