Calculate multiple or pairwise dissimilarity for orders q = 0-N (CqN; Chao et al. 2008 <doi:10/fcvn63>) for a set of species assemblages or interaction networks.
Routines for exploratory and descriptive analysis of functional data such as depth measurements, atypical curves detection, regression models, supervised classification, unsupervised classification and functional analysis of variance.
Adds standardized regression coefficients to objects created by lm'. Also extends the S3 methods print', summary and coef with additional boolean argument standardized and provides xtable'-support.
Implementations of Hurst exponent estimators based on the relationship between wavelet lifting scales and wavelet energy of Knight et al (2017) <doi:10.1007/s11222-016-9698-2>.
Fit (by Maximum Likelihood or MCMC/Bayesian), simulate, and forecast various Markov-Switching GARCH models as described in Ardia et al. (2019) <doi:10.18637/jss.v091.i04>.
Defines classes and methods to learn models and use them to predict binary outcomes. These are generic tools, but we also include specific examples for many common classifiers.
This package provides functionality for the prior and posterior projected Polya tree for the analysis of circular data (Nieto-Barajas and Nunez-Antonio (2019) <arXiv:1902.06020>).
This package contains all phrasal verbs listed in <https://www.englishclub.com/ref/Phrasal_Verbs/> as data frame. Useful for educational purpose as well as for text mining.
Allow to run pylint on Python files with a R command or a RStudio addin. The report appears in the RStudio viewer pane as a formatted HTML file.
Efficient algorithm for estimating piecewise exponential hazard models for right-censored data, and is useful for reliable power calculation, study design, and event/timeline prediction for study monitoring.
Selects invalid instruments amongst a candidate of potentially bad instruments. The algorithm selects potentially invalid instruments and provides an estimate of the causal effect between exposure and outcome.
Fetch data on targeted public investments from Plataforma +Brasil (SICONV) <http://plataformamaisbrasil.gov.br/>, the responsible system for requests, execution, and monitoring of federal discretionary transfers in Brazil.
sqliter helps users, mainly data munging practioneers, to organize their sql calls in a clean structure. It simplifies the process of extracting and transforming data into useful formats.
Set of tools aimed at wrapping some of the functionalities of the packages tools, utils and codetools into a nicer format so that an IDE can use them.
All data in the book "Statistical Methods in Biology" by Welham et al. (2015) <doi:10.1201/b17336> with a corresponding documentation and illustrative analysis of the data.
Format a number (or a list of numbers) to a string (or a list of strings) with SI prefix. Use SI prefixes as constants like (4 * milli)^2.
Efficient coordinate ascent algorithm for fitting regularization paths for linear models penalized by Spike-and-Slab LASSO of Rockova and George (2018) <doi:10.1080/01621459.2016.1260469>.
Accesses raw data via API and calculates social determinants of health measures for user-specified locations in the US, returning them in tidyverse- and sf-compatible data frames.
This package provides wrappers for scclust', a C library for computationally efficient size-constrained clustering with near-optimal performance. See <https://github.com/fsavje/scclust> for more information.
Tidy standardized mean differences ('SMDs'). tidysmd uses the smd package to calculate standardized mean differences for variables in a data frame, returning the results in a tidy format.
Identifies the optimal confidence level to represent the results of a set of pairwise tests as suggested by Armstrong and Poirier (2025) <doi:10.1017/pan.2024.24>.
Assesses evidence for Zipf's Law of Abbreviation in animal vocalisation using IDs, note class and note duration. The package also provides a web plot function for visualisation.
Fits MIDAS denoising autoencoder models for multiple imputation of missing data, generates multiply-imputed datasets, computes imputation means, and runs Rubin's rules regression analysis. Wraps the MIDAS2 Python engine via a local FastAPI server over HTTP', so no reticulate dependency is needed at runtime. Methods are described in Lall and Robinson (2022) <doi:10.1017/pan.2020.49> and Lall and Robinson (2023) <doi:10.18637/jss.v107.i09>.
The R implementation for the Grammar of Succint Lipid Nomenclature parses different short hand notation dialects for lipid names. It normalizes them to a standard name. It further provides calculated monoisotopic masses and sum formulas for each successfully parsed lipid name and supplements it with LIPID MAPS Category and Class information. Also, the structural level and further structural details about the head group, fatty acyls and functional groups are returned, where applicable.