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Module within FSL that provides advanced functionalities for FEAT (FMRI Expert Analysis Tool), including pre-processing steps, model setup, and statistical analysis for fMRI data.
Eddy is a tool within FSL that corrects for eddy current distortions and head movements in diffusion MRI data.
The meshclass module in FSL provides the Mesh class for representing and manipulating 3D models made of triangles, supporting various geometric operations and querie
FAST4 is an automated segmentation tool in FSL that segments brain images into different tissue types and corrects for bias field inhomogeneities.
The bet2 module in FSL is a brain extraction tool that removes non-brain tissue from MRI images, aiding in isolating the brain for further analysis.
A library that implement miscellaneous mathematicals methods.
Module within FSL that facilitates input/output operations using VTK (Visualization Toolkit), enabling advanced visualization and data handling for neuroimaging.
Giftiio is a library within FSL for reading and writing GIFTI files, a format used for surface-based data representation in neuroimaging.
libgdc is a module within FSL that provides essential graphical or data handling functionalities, with its source code available on GitLab.
Module within FSL that provides visualization functionalities, with its source code available on GitLab.
Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.
Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.
Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.
Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.
Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.
Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.
The Gurobi Optimizer is a commercial optimization solver for linear programming (LP), quadratic programming (QP), quadratically constrained programming (QCP), mixed integer linear programming (MILP), mixed-integer quadratic programming (MIQP), and mixed-integer quadratically constrained programming (MIQCP). See here for more info: https://www.gurobi.com/documentation/9.0/quickstart_linux/cs_python.html.
This package provides headers of the HFI1 Linux driver.
This package is low-level user-level Intel's communications interface. The PSM2 API is a high-performance vendor-specific protocol that provides a low-level communications interface for the Intel Omni-Path family of high-speed networking devices.
OpenFabrics Interfaces (OFI) is a framework focused on exporting fabric communication services to applications. OFI is best described as a collection of libraries and applications used to export fabric services. The key components of OFI are: application interfaces, provider libraries, kernel services, daemons, and test applications.
Libfabric is a core component of OFI. It is the library that defines and exports the user-space API of OFI, and is typically the only software that applications deal with directly. It works in conjunction with provider libraries, which are often integrated directly into libfabric.
MUMPS (MUltifrontal Massively Parallel sparse direct Solver) solves a sparse system of linear equations A x = b using Gaussian elimination.
MUMPS (MUltifrontal Massively Parallel sparse direct Solver) solves a sparse system of linear equations A x = b using Gaussian elimination.
SuiteSparse is a suite of sparse matrix algorithms, including: UMFPACK, multifrontal LU factorization; CHOLMOD, supernodal Cholesky; SPQR, multifrontal QR; KLU and BTF, sparse LU factorization, well-suited for circuit simulation; ordering methods (AMD, CAMD, COLAMD, and CCOLAMD); CSparse and CXSparse, a concise sparse Cholesky factorization package; and many other packages.
This package contains all of the above-mentioned parts.
PETSc, pronounced PET-see (the S is silent), is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations.