_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-ambir 0.1.1
Propagated dependencies: r-tidyr@1.3.1 r-magrittr@2.0.4 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://niva-denmark.github.io/ambiR/
Licenses: Expat
Build system: r
Synopsis: Calculate AZTI’s Marine Biotic Index
Description:

Calculate AZTIâ s Marine Biotic Index - AMBI. The included list of benthic fauna species according to their sensitivity to pollution. Matching species in sample data to the list allows the calculation of fractions of individuals in the different sensitivity categories and thereafter the AMBI index. The Shannon Diversity Index H and the Danish benthic fauna quality index DKI (Dansk Kvalitetsindeks) can also be calculated, as well as the multivariate M-AMBI index. Borja, A., Franco, J. ,Pérez, V. (2000) "A marine biotic index to establish the ecological quality of soft bottom benthos within European estuarine and coastal environments" <doi:10.1016/S0025-326X(00)00061-8>.

r-ampgram 1.0
Propagated dependencies: r-stringi@1.8.7 r-shiny@1.11.1 r-ranger@0.17.0 r-pbapply@1.7-4 r-devtools@2.4.6 r-biogram@1.6.3
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/michbur/AmpGram
Licenses: GPL 3
Build system: r
Synopsis: Prediction of Antimicrobial Peptides
Description:

Predicts antimicrobial peptides using random forests trained on the n-gram encoded peptides. The implemented algorithm can be accessed from both the command line and shiny-based GUI. The AmpGram model is too large for CRAN and it has to be downloaded separately from the repository: <https://github.com/michbur/AmpGramModel>.

r-aspline 0.2.0
Propagated dependencies: r-tidyr@1.3.1 r-splines2@0.5.4 r-rlang@1.1.6 r-rcpp@1.1.0 r-mgcv@1.9-4 r-magrittr@2.0.4 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/goepp/aspline
Licenses: GPL 3
Build system: r
Synopsis: Spline Regression with Adaptive Knot Selection
Description:

Perform one-dimensional spline regression with automatic knot selection. This package uses a penalized approach to select the most relevant knots. B-splines of any degree can be fitted. More details in Goepp et al. (2018)', "Spline Regression with Automatic Knot Selection", <arXiv:1808.01770>.

r-asympdiag 0.3.1
Propagated dependencies: r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/Alvaro-Kothe/asympDiag
Licenses: Expat
Build system: r
Synopsis: Diagnostic Tools for Asymptotic Theory
Description:

Leveraging Monte Carlo simulations, this package provides tools for diagnosing regression models. It implements a parametric bootstrap framework to compute statistics, generates diagnostic envelopes to assess goodness-of-fit, and evaluates type I error control for Wald tests. By simulating data under the assumption that the model is true, it helps to identify model mis-specifications and enhances the reliability of the model inferences.

r-astgrepr 0.1.1
Propagated dependencies: r-yaml@2.3.10 r-rrapply@1.2.8 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/etiennebacher/astgrepr
Licenses: Expat
Build system: r
Synopsis: Parse and Manipulate R Code
Description:

Parsing R code is key to build tools such as linters and stylers. This package provides a binding to the Rust crate ast-grep so that one can parse and explore R code.

r-ablasso 1.1
Propagated dependencies: r-mvtnorm@1.3-3 r-matrixstats@1.5.0 r-hdm@0.3.2
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=ablasso
Licenses: GPL 3+
Build system: r
Synopsis: Arellano-Bond LASSO Estimator for Dynamic Linear Panel Models
Description:

This package implements the Arellano-Bond estimation method combined with LASSO for dynamic linear panel models. See Chernozhukov et al. (2024) "Arellano-Bond LASSO Estimator for Dynamic Linear Panel Models". arXiv preprint <doi:10.48550/arXiv.2402.00584>.

r-anthroplus 1.0.0
Propagated dependencies: r-anthro@1.1.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/WorldHealthOrganization/anthroplus
Licenses: GPL 3+
Build system: r
Synopsis: Computation of the WHO 2007 References for School-Age Children and Adolescents (5 to 19 Years)
Description:

This package provides WHO 2007 References for School-age Children and Adolescents (5 to 19 years) (z-scores) with confidence intervals and standard errors around the prevalence estimates, taking into account complex sample designs. More information on the methods is available online: <https://www.who.int/tools/growth-reference-data-for-5to19-years>.

r-aberrance 0.3.0
Propagated dependencies: r-rcpp@1.1.0 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/kyliegorney/aberrance
Licenses: GPL 3+
Build system: r
Synopsis: Detect Aberrant Behavior in Test Data
Description:

Detect several types of aberrant behavior, including answer copying, answer similarity, change point, nonparametric misfit, parametric misfit, preknowledge, rapid guessing, and test tampering.

r-aedseo 1.1.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-scales@1.4.0 r-rlang@1.1.6 r-purrr@1.2.0 r-pracma@2.4.6 r-plyr@1.8.9 r-lubridate@1.9.4 r-lifecycle@1.0.4 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/ssi-dk/aedseo
Licenses: Expat
Build system: r
Synopsis: Automated and Early Detection of Seasonal Epidemic Onset and Burden Levels
Description:

This package provides a powerful tool for automating the early detection of seasonal epidemic onsets in time series data. It offers the ability to estimate growth rates across consecutive time intervals, calculate the sum of cases (SoC) within those intervals, and estimate seasonal onsets within user defined seasons. With use of a disease-specific threshold it also offers the possibility to estimate seasonal onset of epidemics. Additionally it offers the ability to estimate burden levels for seasons based on historical data. It is aimed towards epidemiologists, public health professionals, and researchers seeking to identify and respond to seasonal epidemics in a timely fashion.

r-airports 0.1.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/OpenIntroStat/airports
Licenses: GPL 3
Build system: r
Synopsis: Data on Airports
Description:

Geographic, use, and property related data on airports.

r-abms 0.2
Propagated dependencies: r-truncnorm@1.0-9 r-mvtnorm@1.3-3 r-gigrvg@0.8 r-bayeslogit@2.1
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/SirCornflake/BMS
Licenses: GPL 3+
Build system: r
Synopsis: Augmented Bayesian Model Selection for Regression Models
Description:

This package provides tools to perform model selection alongside estimation under Linear, Logistic, Negative binomial, Quantile, and Skew-Normal regression. Under the spike-and-slab method, a probability for each possible model is estimated with the posterior mean, credibility interval, and standard deviation of coefficients and parameters under the most probable model.

r-arrayhelpers 1.1-0
Propagated dependencies: r-svunit@1.0.8
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: http://arrayhelpers.r-forge.r-project.org/
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Convenience Functions for Arrays
Description:

Some convenient functions to work with arrays.

r-afmtoolkit 1.0.0
Propagated dependencies: r-scales@1.4.0 r-minpack-lm@1.2-4 r-gridextra@2.3 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=afmToolkit
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Functions for Atomic Force Microscope Force-Distance Curves Analysis
Description:

Set of functions for analyzing Atomic Force Microscope (AFM) force-distance curves. It allows to obtain the contact and unbinding points, perform the baseline correction, estimate the Young's modulus, fit up to two exponential decay function to a stress-relaxation / creep experiment, obtain adhesion energies. These operations can be done either over a single F-d curve or over a set of F-d curves in batch mode.

r-aliases2entrez 0.1.2
Propagated dependencies: r-readr@2.1.6 r-rcurl@1.98-1.17 r-org-hs-eg-db@3.22.0 r-limma@3.66.0 r-foreach@1.5.2 r-doparallel@1.0.17 r-annotationdbi@1.72.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=aliases2entrez
Licenses: Expat
Build system: r
Synopsis: Converts Human gene symbols to entrez IDs
Description:

Queries multiple resources authors HGNC (2019) <https://www.genenames.org>, authors limma (2015) <doi:10.1093/nar/gkv007> to find the correspondence between evolving nomenclature of human gene symbols, aliases, previous symbols or synonyms with stable, curated gene entrezID from NCBI database. This allows fast, accurate and up-to-date correspondence between human gene expression datasets from various date and platform (e.g: gene symbol: BRCA1 - ID: 672).

r-assocind 1.0.1
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=assocInd
Licenses: GPL 2
Build system: r
Synopsis: Implements New and Existing Association Indices for Constructing Animal Social Networks
Description:

This package implements several new association indices that can control for various types of errors. Also includes existing association indices and functions for simulating the effects of different rates of error on estimates of association strength between individuals using each method.

r-addinsjoaomelo 0.1.0
Propagated dependencies: r-stringr@1.6.0 r-rstudioapi@0.17.1 r-purrr@1.2.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=addinsJoaoMelo
Licenses: CC0
Build system: r
Synopsis: Addins Made of Joao Melo
Description:

Provide addins for RStudio'. It currently contains 3 addins. The first to add a shortcut for the double pipe. The second is to add a shortcut for the same operator. And the third to simplify the creation of vectors from texts pasted from the computer transfer area.

r-anidom 0.1.5
Propagated dependencies: r-rptr@0.9.23
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=aniDom
Licenses: GPL 2
Build system: r
Synopsis: Inferring Dominance Hierarchies and Estimating Uncertainty
Description:

Provides: (1) Tools to infer dominance hierarchies based on calculating Elo scores, but with custom functions to improve estimates in animals with relatively stable dominance ranks. (2) Tools to plot the shape of the dominance hierarchy and estimate the uncertainty of a given data set.

r-autoslider-core 0.3.2
Propagated dependencies: r-yaml@2.3.10 r-tidyr@1.3.1 r-tern@0.9.10 r-survival@3.8-3 r-stringr@1.6.0 r-rvg@0.4.0 r-rtables@0.6.15 r-rlistings@0.2.13 r-rlang@1.1.6 r-officer@0.7.1 r-gtsummary@2.5.0 r-gridextra@2.3 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-formatters@0.5.12 r-forcats@1.0.1 r-flextable@0.9.10 r-dplyr@1.1.4 r-cli@3.6.5 r-checkmate@2.3.3 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/insightsengineering/autoslider.core
Licenses: ASL 2.0
Build system: r
Synopsis: Slide Automation for Tables, Listings and Figures
Description:

The normal process of creating clinical study slides is that a statistician manually type in the numbers from outputs and a separate statistician to double check the typed in numbers. This process is time consuming, resource intensive, and error prone. Automatic slide generation is a solution to address these issues. It reduces the amount of work and the required time when creating slides, and reduces the risk of errors from manually typing or copying numbers from the output to slides. It also helps users to avoid unnecessary stress when creating large amounts of slide decks in a short time window.

r-admiraldev 1.4.0
Propagated dependencies: r-withr@3.0.2 r-tidyselect@1.2.1 r-tidyr@1.3.1 r-stringr@1.6.0 r-roxygen2@7.3.3 r-rlang@1.1.6 r-purrr@1.2.0 r-lubridate@1.9.4 r-lifecycle@1.0.4 r-glue@1.8.0 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://pharmaverse.github.io/admiraldev/
Licenses: FSDG-compatible
Build system: r
Synopsis: Utility Functions and Development Tools for the Admiral Package Family
Description:

Utility functions to check data, variables and conditions for functions used in admiral and admiral extension packages. Additional utility helper functions to assist developers with maintaining documentation, testing and general upkeep of admiral and admiral extension packages.

r-adehabitathr 0.4.22
Propagated dependencies: r-sp@2.2-0 r-adehabitatma@0.3.17 r-adehabitatlt@0.3.29 r-ade4@1.7-23
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=adehabitatHR
Licenses: GPL 2+
Build system: r
Synopsis: Home Range Estimation
Description:

This package provides a collection of tools for the estimation of animals home range.

r-asymmetry 2.0.5
Propagated dependencies: r-smacof@2.1-7 r-gplots@3.2.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=asymmetry
Licenses: GPL 3+
Build system: r
Synopsis: Multidimensional Scaling of Asymmetric Proximities
Description:

Multidimensional scaling models and methods for the visualization and analysis of asymmetric proximity data. An asymmetric data matrix has the same number of rows and columns, and these rows and columns refer to the same set of objects. At least some elements in the upper-triangle are different from the corresponding elements in the lower triangle. An example of an asymmetric matrix is a student migration table, where the rows correspond to the countries of origin of the students and the columns to the destination countries. This package provides algorithms for three multidimensional scaling models, the slide-vector model, a scaling model with unique dimensions and the asymscal model.Furthermore, some other procedures, such as a heat map for skew-symmetric data, and the decomposition of asymmetry are also provided for the exploratory analysis of asymmetric tables.

r-avidar 1.2.1
Propagated dependencies: r-xml2@1.5.0 r-tidyr@1.3.1 r-tibble@3.3.0 r-readr@2.1.6 r-rcolorbrewer@1.1-3 r-r6@2.6.1 r-httr@1.4.7 r-dplyr@1.1.4 r-curl@7.0.0 r-circlize@0.4.16 r-base64enc@0.1-3
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://gitlab.com/fortunalab/avidaR
Licenses: Expat
Build system: r
Synopsis: Computational Biologist’s Toolkit To Get Data From 'avidaDB'
Description:

Easy-to-use tools for performing complex queries on avidaDB', a semantic database that stores genomic and transcriptomic data of self-replicating computer programs (known as digital organisms) that mutate and evolve within a user-defined computational environment.

r-academicthemes 0.0.2
Propagated dependencies: r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/hwarden162/AcademicThemes
Licenses: Expat
Build system: r
Synopsis: Colour Plots with Palettes from Academic Institutions
Description:

Functionality to allow users to easily colour plots with the colour palettes of various academic institutions.

r-aclhs 1.0.1
Propagated dependencies: r-geor@1.9-6 r-deoptim@2.2-8
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/vargaslab/acLHS
Licenses: Expat
Build system: r
Synopsis: Autocorrelated Conditioned Latin Hypercube Sampling
Description:

Implementation of the autocorrelated conditioned Latin Hypercube Sampling (acLHS) algorithm for 1D (time-series) and 2D (spatial) data. The acLHS algorithm is an extension of the conditioned Latin Hypercube Sampling (cLHS) algorithm that allows sampled data to have similar correlative and statistical features of the original data. Only a properly formatted dataframe needs to be provided to yield subsample indices from the primary function. For more details about the cLHS algorithm, see Minasny and McBratney (2006), <doi:10.1016/j.cageo.2005.12.009>. For acLHS, see Le and Vargas (2024) <doi:10.1016/j.cageo.2024.105539>.

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Total results: 68655