Custom script for Rofi that allows you to copy or fill passwords from your Lastpass vault.

This package estimates previously compiled regression models using the rstan package, which provides the R interface to the Stan C++ library for Bayesian estimation. Users specify models via the customary R syntax with a formula and data.frame plus some additional arguments for priors.

This package performs differential pattern analysis for Ribo-seq data. It identifies genes with significantly different patterns in the ribosome footprint between two conditions. RiboDiPA contains five major components including bam file processing, P-site mapping, data binning, differential pattern analysis and footprint visualization.

RTNduals is a tool that searches for possible co-regulatory loops between regulon pairs generated by the RTN package. It compares the shared targets in order to infer dual regulons', a new concept that tests whether regulators can co-operate or compete in influencing targets.

Retrieve, map and summarize data from the VertNet.org archives (<https://vertnet.org/>). Functions allow searching by many parameters, including taxonomic names, places, and dates. In addition, there is an interface for conducting spatially delimited searches, and another for requesting large datasets via email.

This package provides a novel numerical algorithm that provides functionality for estimating the exact 95% confidence interval of the location parameter in the random effects model, and is much faster than the naive method. Works best when the number of studies is between 6-20.

R^2 measure of explained variation under the semiparametric additive hazards model is estimated. The measure can be used as a measure of predictive capability and therefore it can be adopted in model selection process. Rava, D. and Xu, R. (2020) <arXiv:2003.09460>.

Easy-to-use functions for downloading air quality data from the Mexican National Air Quality Information System (SINAICA). Allows you to query pollution and meteorological parameters from more than a hundred monitoring stations located throughout Mexico. See <https://sinaica.inecc.gob.mx> for more information.

This R package provide functions that are used in the BREW3R workflow. This mainly contains a function that extend a gtf as GRanges using information from another gtf (also as GRanges). The process allows to extend gene annotation without increasing the overlap between gene ids.

This package provides an interface between R and PostGIS'-enabled PostgreSQL databases to transparently transfer spatial data. Both vector (points, lines, polygons) and raster data are supported in read and write modes. Also provides convenience functions to execute common procedures in PostgreSQL/PostGIS'.

This package provides functions for dissimilarity analysis and memory-based learning (MBL, a.k.a local modeling) in complex spectral data sets. Most of these functions are based on the methods presented in Ramirez-Lopez et al. (2013) <doi:10.1016/j.geoderma.2012.12.014>.

This package provides a log format that's readable by humans and easily parseable by computers.

This package provides raw beta values from 36 samples across 3 groups from Illumina 450k methylation arrays.

This is a package for the assessment and comparison of the performance of risk prediction (survival) models.

The goal of bedtorch is to provide a fast BED file manipulation tool suite native in R.

The devtools package is a collection of package development tools to simplify the devolpment of R packages.

Guile-RSVG wraps the RSVG library for Guile, allowing you to render SVG images onto Cairo surfaces.

This package provides a basic random number generation library, including the ability to split random number generators.

Manual translation from C to Common Lisp of some random number generation functions from the GSL library.

nio provides cross-platform asynchronous I/O primitives in Ruby for scalable network clients and servers.

Data from 8 Affymetrix genechips, looking at a 2x2 factorial design (with 2 repeats per level).

Define a SummarizedExperiment and exploratory app for Ivy-GAP glioblastoma image, expression, and clinical data.

The package contains functions that can be used to compare expression measures on different array platforms.

Affymetrix Affymetrix YG_S98 Array annotation data (chip ygs98) assembled using data from public repositories.