This package provides tools to create time series and geometry NetCDF files.

This package provides tools for calculating and viewing topological properties of phylogenetic trees.

This package provides tools for reshaping, plotting, and manipulating matrices of orthogonal polynomials.

Download data from individual XKCD comics, written by Randall Munroe <https://xkcd.com/>.

RNAeditr analyzes site-specific RNA editing events, as well as hyper-editing regions. The editing frequencies can be tested against binary, continuous or survival outcomes. Multiple covariate variables as well as interaction effects can also be incorporated in the statistical models.

Transfer REDCap (Research Electronic Data Capture) data to a database, specifically optimized for DuckDB'. Processes data in chunks to handle large datasets without exceeding available memory. Features include data labeling, coded value conversion, and hearing a "quack" sound on success.

Supports analysis of spatial data processed with the GeoPAT 2 software <https://github.com/Nowosad/geopat2>. Available features include creation of a grid based on the GeoPAT 2 grid header file and reading a GeoPAT 2 text outputs.

Helps to prepare a release. Before releasing an R package it is important to update the DESCRIPTION file and the changelog. This package prepares these files and also updates the versions according to the branches. It relies heavily on the desc packages.

This package provides HDF5 storage based methods and functions for manipulation of flow cytometry data.

This package provides S4 data structures and basic functions to deal with flow cytometry data.

This package infers, visualizes and analyzes the cell-cell communication networks from scRNA-seq data.

This package provides Ace editor bindings to enable a rich text editing environment within Shiny.

This package provides a stepwise approach to identifying recombination breakpoints in a genomic sequence alignment.

This package provides an implementation of heatmaps that offers more control over dimensions and appearance.

Crass is a pure Ruby CSS parser based on the CSS Syntax Level 3 spec.

Erubi is a ERB template engine for Ruby. It is a simplified fork of Erubis

The algorithm is based on the non-negative tucker decomposition (NTD2) of nnTensor.

Inference and detection of switch-like differential expression across single-cell RNA-seq trajectories.

This package provides a package containing an environment representing the YG_S98.cdf file.

This package provides a tool for generating acronyms and initialisms from arbitrary text input.

Fits finite mixture models of univariate Gaussian distributions using JAGS within a Bayesian framework.

This package implements a Ward-like hierarchical clustering algorithm including soft spatial/geographical constraints.

Augment clinical data with metadata to create output used in conventional publications and reports.

This package contains generic functions for performing cross validation and for computing diagnostic errors.