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r-hgu95av2 2.2.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/hgu95av2
Licenses: Artistic License 2.0
Synopsis: Affymetrix Human Genome U95 Set annotation data (hgu95av2)
Description:

This package provides Affymetrix Human Genome U95 Set annotation data (hgu95av2) assembled using data from public data repositories.

r-interval 1.1-1.0
Propagated dependencies: r-icens@1.82.0 r-mlecens@0.1-7.1 r-perm@1.0-0.4 r-survival@3.8-3
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://cran.r-project.org/web/packages/interval/
Licenses: GPL 2+
Synopsis: Weighted Logrank tests and NPMLE for interval censored data
Description:

This package provides functions to fit nonparametric survival curves, plot them, and perform logrank or Wilcoxon type tests.

r-skitools 0.0.0.9000-2.ba322dc
Propagated dependencies: r-biostrings@2.78.0 r-complexheatmap@2.26.0 r-data-table@1.17.8 r-devtools@2.4.6 r-dt@0.34.0 r-gchain@0.2.0-2.19f8bb9 r-genomeinfodb@1.46.0 r-genomicranges@1.62.0 r-ggplot2@4.0.1 r-gplots@3.2.0 r-gutils@0.2.0-2.fc24db6 r-htmlwidgets@1.6.4 r-hwriter@1.3.2.1 r-igraph@2.2.1 r-iranges@2.44.0 r-plotly@4.11.0 r-rcolorbrewer@1.1-3 r-reshape2@1.4.5 r-s4vectors@0.48.0 r-stringr@1.6.0 r-variantannotation@1.56.0
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://github.com/mskilab/skitools/
Licenses: Expat
Synopsis: Various mskilab R utilities
Description:

This package provides R miscellaneous utilities for basic data manipulation, debugging, visualization, lsf management, and common mskilab tasks.

r-bindrcpp 0.2.3
Propagated dependencies: r-bindr@0.1.2 r-plogr@0.2.0 r-rcpp@1.1.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/krlmlr/bindrcpp
Licenses: Expat
Synopsis: Rcpp interface to active bindings
Description:

This package provides an easy way to fill an environment with active bindings that call a C++ function.

r-sandwich 3.1-1
Propagated dependencies: r-zoo@1.8-14
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/sandwich/
Licenses: GPL 2 GPL 3
Synopsis: Robust Covariance Matrix Estimators
Description:

This package provides model-robust standard error estimators for cross-sectional, time series, clustered, panel, and longitudinal data.

r-alluvial 0.1-2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/mbojan/alluvial
Licenses: Expat
Synopsis: Create parallel sets plots (Alluvial Diagrams)
Description:

This package creates alluvial diagrams (also known as parallel sets plots) for multivariate and time series-like data.

r-partykit 1.2-24
Propagated dependencies: r-formula@1.2-5 r-inum@1.0-5 r-libcoin@1.0-10 r-mvtnorm@1.3-3 r-rpart@4.1.24 r-survival@3.8-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://partykit.R-Forge.R-project.org/partykit
Licenses: GPL 2+
Synopsis: Toolkit for recursive partytioning
Description:

This package provides a toolkit with infrastructure for representing, summarizing, and visualizing tree-structured regression and classification models.

r-classint 0.4-11
Propagated dependencies: r-class@7.3-23 r-e1071@1.7-16 r-kernsmooth@2.23-26
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/r-spatial/classInt/
Licenses: GPL 2+
Synopsis: Choose univariate class intervals
Description:

This package provides selected commonly used methods for choosing univariate class intervals for mapping or other graphics purposes.

r-huo22-db 3.2.3
Propagated dependencies: r-org-hs-eg-db@3.22.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/HuO22.db
Licenses: Artistic License 2.0
Synopsis: FHCRC Genomics Shared Resource HuO22 Annotation Data (HuO22)
Description:

FHCRC Genomics Shared Resource HuO22 Annotation Data (HuO22) assembled using data from public repositories.

r-docknitr 1.0.1
Dependencies: docker@20.10.27
Propagated dependencies: r-sys@3.4.3 r-rstudioapi@0.17.1 r-knitr@1.50
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=docknitr
Licenses: Expat
Synopsis: Use Docker Images to Process Rmarkdown Blocks
Description:

Gives you the ability to use arbitrary Docker images (including custom ones) to process Rmarkdown code chunks.

r-elliplot 1.3.0
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=elliplot
Licenses: Expat
Synopsis: Ellipse Summary Plot of Quantiles
Description:

Correlation chart of two set (x and y) of data. Using Quantiles. Visualize the effect of factor.

r-hot-deck 1.2
Propagated dependencies: r-tidyr@1.3.1 r-mice@3.18.0 r-mass@7.3-65 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=hot.deck
Licenses: Expat
Synopsis: Multiple Hot Deck Imputation
Description:

This package performs multiple hot-deck imputation of categorical and continuous variables in a data frame.

r-infercsn 1.2.0
Propagated dependencies: r-thisutils@0.3.1 r-rcpp@1.1.0 r-purrr@1.2.0 r-matrix@1.7-4 r-l0learn@2.1.0 r-ggraph@2.2.2 r-ggplot2@4.0.1 r-ggnetwork@0.5.14 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://mengxu98.github.io/inferCSN/
Licenses: Expat
Synopsis: Inferring Cell-Specific Gene Regulatory Network
Description:

An R package for inferring cell-type specific gene regulatory network from single-cell RNA-seq data.

r-iweigreg 1.1
Propagated dependencies: r-trust@0.1-8 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: http://www.stat.rutgers.edu/~ztan
Licenses: GPL 2+
Synopsis: Improved Methods for Causal Inference and Missing Data Problems
Description:

Improved methods based on inverse probability weighting and outcome regression for causal inference and missing data problems.

r-mpsychor 0.10-8
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=MPsychoR
Licenses: GPL 2
Synopsis: Modern Psychometrics with R
Description:

Supplementary materials and datasets for the book "Modern Psychometrics With R" (Mair, 2018, Springer useR! series).

r-mrgsolve 1.6.1
Propagated dependencies: r-tidyselect@1.2.1 r-tibble@3.3.0 r-rlang@1.1.6 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-magrittr@2.0.4 r-lifecycle@1.0.4 r-glue@1.8.0 r-dplyr@1.1.4 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://mrgsolve.org/docs/
Licenses: GPL 2+
Synopsis: Simulate from ODE-Based Models
Description:

Fast simulation from ordinary differential equation (ODE) based models typically employed in quantitative pharmacology and systems biology.

r-margaret 0.1.4
Propagated dependencies: r-writexl@1.5.4 r-widyr@0.1.5 r-usethis@3.2.1 r-treemapify@2.6.0 r-tidyverse@2.0.0 r-tidytext@0.4.3 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-stringi@1.8.7 r-scholar@0.2.5 r-rvest@1.0.5 r-rlang@1.1.6 r-readr@2.1.6 r-purrr@1.2.0 r-lubridate@1.9.4 r-igraph@2.2.1 r-httr@1.4.7 r-dplyr@1.1.4 r-devtools@2.4.6
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/coreofscience/margaret
Licenses: Expat
Synopsis: Scientometric Analysis Minciencias
Description:

The target of margaret is help to extract data from Minciencias to analyze scientific production in Colombia.

r-mappings 0.2.0
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/benjaminrich/mappings
Licenses: GPL 3
Synopsis: Functions for Transforming Categorical Variables
Description:

Easily create functions to map between different sets of values, such as for re-labeling categorical variables.

r-nflreadr 1.5.0
Propagated dependencies: r-rlang@1.1.6 r-rappdirs@0.3.3 r-memoise@2.0.1 r-lifecycle@1.0.4 r-glue@1.8.0 r-data-table@1.17.8 r-curl@7.0.0 r-cli@3.6.5 r-cachem@1.1.0
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://nflreadr.nflverse.com
Licenses: Expat
Synopsis: Download 'nflverse' Data
Description:

This package provides a minimal package for downloading data from GitHub repositories of the nflverse project.

r-optional 2.0.1
Propagated dependencies: r-magrittr@2.0.4
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=optional
Licenses: FSDG-compatible
Synopsis: Optional Types and Pattern Matching
Description:

Introduces optional types with some() and none, as well as match_with() from functional languages.

r-pop-lion 1.0.1
Propagated dependencies: r-testthat@3.3.0 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pop.lion
Licenses: GPL 3
Synopsis: Models for Simulating Lion Populations
Description:

Simulate the dynamic of lion populations using a specific Individual-Based Model (IBM) compiled in C.

r-spyvsspy 0.1.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/shabbychef/SPYvsSPY
Licenses: LGPL 3
Synopsis: Spy vs. Spy Data
Description:

Data on the Spy vs. Spy comic strip of Mad magazine, created and written by Antonio Prohias.

r-threeway 1.1.3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=ThreeWay
Licenses: GPL 2+
Synopsis: Three-Way Component Analysis
Description:

Component analysis for three-way data arrays by means of Candecomp/Parafac, Tucker3, Tucker2 and Tucker1 models.

r-rsubread 2.24.0
Dependencies: zlib@1.3.1
Propagated dependencies: r-matrix@1.7-4
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/Rsubread/
Licenses: GPL 3
Synopsis: Subread sequence alignment and counting for R
Description:

This package provides tools for alignment, quantification and analysis of second and third generation sequencing data. It includes functionality for read mapping, read counting, SNP calling, structural variant detection and gene fusion discovery. It can be applied to all major sequencing techologies and to both short and long sequence reads.

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