Incorporate various statistics and layout customization options to enhance the efficiency and adaptability of the Kaplan-Meier plots.
This package provides a set of visual input controls for Shiny apps to facilitate filtering across multiple outputs.
This package provides a package to analyze flow cytometric data of complex microbial communities based on histogram images.
INDAC FlyChip_long_oligonucleotide_002 (FL002) annotation data (chip indac) assembled using data from public repositories.
Analyze read length, phred scores and alphabet frequency and DNA k-mers on uncompressed and compressed fastq files.
This package implements the mini-batch k-means algorithm for large datasets, including support for on-disk data representation.
This package provides basic routines for estimation of gene-specific transcriptional derivatives and visualization of the resulting velocity patterns.
This package provides an environment for teaching "Financial Engineering and Computational Finance" and for managing chronological and calendar objects.
This package provides tools for fitting linear models and generalized linear models to large data sets by updating algorithms.
Rail is a nREPL client based on monroe with similar features, but aims to be a more complete implementation.
This package provides a unit testing system for R designed to be fun, flexible and easy to set up.
rss-bridge generates Atom feeds for social networking websites lacking feeds. Supported websites include Facebook, Twitter, Instagram and YouTube.
This package provides functions to compile and load Rust code from R, similar to how Rcpp or cpp11 allow easy interfacing with C++ code. Also provides helper functions to create R packages that use Rust code. Under the hood, the Rust crate extendr is used to do all the heavy lifting.
This package provides methods readMat() and writeMat() for reading and writing MAT files. For user with MATLAB v6 or newer installed (either locally or on a remote host), the package also provides methods for controlling MATLAB (trademark) via R and sending and retrieving data between R and MATLAB.
The recount3 package enables access to a large amount of uniformly processed RNA-seq data from human and mouse. You can download RangedSummarizedExperiment objects at the gene, exon or exon-exon junctions level with sample metadata and QC statistics. In addition we provide access to sample coverage BigWig files.
This package contains a set of functions for working with Random Number Generators (RNGs). In particular, it defines a generic S4 framework for getting/setting the current RNG, or RNG data that are embedded into objects for reproducibility. Notably, convenient default methods greatly facilitate the way current RNG settings can be changed.
The provided package implements the statistical tests for the functional repeated measures analysis problem (Kurylo and Smaga, 2023, <arXiv:2306.03883>). These procedures enable us to verify the overall hypothesis regarding equality, as well as hypotheses for pairwise comparisons (i.e., post hoc analysis) of mean functions corresponding to repeated experiments.
Combine multiple data files from a common directory. The data files will be read into R and bound together, creating a single large data.frame. A general function is provided along with a specific function for data that was collected using the open-source experiment builder OpenSesame <https://osdoc.cogsci.nl/>.
Implementation of the metalog distribution in R. The metalog distribution is a modern, highly flexible, data-driven distribution. Metalogs are developed by Keelin (2016) <doi:10.1287/deca.2016.0338>. This package provides functions to build these distributions from raw data. Resulting metalog objects are then useful for exploratory and probabilistic analysis.
Self-configuring, encrypted and resilient mesh networking stack for LoRa, packet radio, WiFi and everything in between.
This package provides a robust framework for analyzing mortality data from bioassays for one or several strains/lines/populations.
This package provides tools for Dating Business Cycles using Harding-Pagan (Quarterly Bry-Boschan) method and various plotting features.
The backtest package provides facilities for exploring portfolio-based conjectures about financial instruments (stocks, bonds, swaps, options, et cetera).
This package provides a simple way to assess the stability of candidate housekeeping genes is implemented in this package.