This package performs Intron-Exon Retention analysis on RNA-seq data (.bam files).

This package provides a package containing an environment representing the Maize.cdf file.

This package provides a package containing an environment representing the Test1.CDF file.

This package provides a package containing an environment representing the Test3.CDF file.

This package provides a package containing an environment representing the Test2.CDF file.

This package provides a package containing an environment representing the wheat.cdf file.

Network-based clustering using a Bayesian network mixture model with optional covariate adjustment.

Comparison of two ROC curves through the methodology proposed by Ana C. Braga.

This package provides a set of functions to manage CRAN'-like repositories efficiently.

This package provides utility functions to deal with Italian fiscal code ('codice fiscale').

Time series analysis based on lambda transformer and variational seq2seq, built on Torch'.

Estimation of the local false discovery rate using the method of moments.

This package provides a user-friendly tool for visualizing categorical or group movement.

This package provides tools to create time series and geometry NetCDF files.

This package provides tools for reshaping, plotting, and manipulating matrices of orthogonal polynomials.

This package provides tools for calculating and viewing topological properties of phylogenetic trees.

Download data from individual XKCD comics, written by Randall Munroe <https://xkcd.com/>.

RNAeditr analyzes site-specific RNA editing events, as well as hyper-editing regions. The editing frequencies can be tested against binary, continuous or survival outcomes. Multiple covariate variables as well as interaction effects can also be incorporated in the statistical models.

Supports analysis of spatial data processed with the GeoPAT 2 software <https://github.com/Nowosad/geopat2>. Available features include creation of a grid based on the GeoPAT 2 grid header file and reading a GeoPAT 2 text outputs.

Transfer REDCap (Research Electronic Data Capture) data to a database, specifically optimized for DuckDB'. Processes data in chunks to handle large datasets without exceeding available memory. Features include data labeling, coded value conversion, and hearing a "quack" sound on success.

Helps to prepare a release. Before releasing an R package it is important to update the DESCRIPTION file and the changelog. This package prepares these files and also updates the versions according to the branches. It relies heavily on the desc packages.

This package provides HDF5 storage based methods and functions for manipulation of flow cytometry data.

This package provides S4 data structures and basic functions to deal with flow cytometry data.

This package infers, visualizes and analyzes the cell-cell communication networks from scRNA-seq data.