Simulates and computes (maximum) likelihood of a dynamical model of community assembly that takes into account phylogenetic history.

Computes the first stage GMM estimate of a dynamic linear model with p lags of the dependent variables.

Estimation, validation and prediction of models of different types : linear models, additive models, MARS,PolyMARS and Kriging.

This package provides data transformations, estimation utilities, predictive evaluation measures and simulation functions for discrete time survival analysis.

View 2D/3D sections, contour plots, mesh of excursion sets for computer experiments designs, surrogates or test functions.

Exchange rate regression and structural change tools for estimating, testing, dating, and monitoring (de facto) exchange rate regimes.

Convenient functions to create ggplot2 graphics following the editorial guidelines of the Institute for Applied Economic Research (Ipea).

Calculates event rates and compares means and variances of groups of interval data corrected for missed arrival observations.

This package provides histograms, boxplots and dotplots as alternatives to scatterplots of data when plotting fitted logistic regressions.

Read a table of fixed width formatted data of different types into a data.frame for each type.

Similarity measures for hierarchical clustering of objects characterized by nominal (categorical) variables. Evaluation criteria for nominal data clustering.

Nonparametric Tests for Main Effects, Simple Effects and Interaction Effect with Censored Data and Two Factorial Influencing Variables.

Clustering unilayer and multilayer network data by means of finite mixtures is the main utility of netClust'.

This package provides carefully chosen color palettes as used a.o. at OpenAnalytics <http://www.openanalytics.eu>.

Allows specification and fitting of some parameter estimation examples inspired by time-resolved spectroscopy via a Shiny GUI.

This package provides a simple package to grab a Bible proverb corresponding to the day of the month.

Incorporate various statistics and layout customization options to enhance the efficiency and adaptability of the Kaplan-Meier plots.

This package provides a set of tools for writing and sharing interactive courses to be used with swirl.

This package provides a set of visual input controls for Shiny apps to facilitate filtering across multiple outputs.

This package contains a set of functions for working with Random Number Generators (RNGs). In particular, it defines a generic S4 framework for getting/setting the current RNG, or RNG data that are embedded into objects for reproducibility. Notably, convenient default methods greatly facilitate the way current RNG settings can be changed.

The recount3 package enables access to a large amount of uniformly processed RNA-seq data from human and mouse. You can download RangedSummarizedExperiment objects at the gene, exon or exon-exon junctions level with sample metadata and QC statistics. In addition we provide access to sample coverage BigWig files.

This package provides functions to compile and load Rust code from R, similar to how Rcpp or cpp11 allow easy interfacing with C++ code. Also provides helper functions to create R packages that use Rust code. Under the hood, the Rust crate extendr is used to do all the heavy lifting.

This package provides methods readMat() and writeMat() for reading and writing MAT files. For user with MATLAB v6 or newer installed (either locally or on a remote host), the package also provides methods for controlling MATLAB (trademark) via R and sending and retrieving data between R and MATLAB.

Combine multiple data files from a common directory. The data files will be read into R and bound together, creating a single large data.frame. A general function is provided along with a specific function for data that was collected using the open-source experiment builder OpenSesame <https://osdoc.cogsci.nl/>.