Computes factorial A-, D- and E-optimal designs for two-colour cDNA microarray experiments.
This package performs Gamma regression, where both mean and shape parameters follows lineal regression structures.
This package provides various tests for comparing high-dimensional mean vectors in two sample populations.
Enables Python'-like importing/loading of packages or functions with aliasing to prevent namespace conflicts.
Most importantly, calculates Kullback-Leibler Divergence (KLD), Turing's perspective estimator and their confidence intervals.
This package provides a collection of functions for computations and visualizations of microbial pan-genomes.
Designed to add datasets which are used in the Nonparametric Statistical Methods textbook, 3rd edition.
Retrieves a pluscode by inputting latitude and longitude. Includes additional functions to retrieve neighbouring pluscodes'.
Starting from a Regression Model, it provides a stepwise procedure to select the linear predictor.
Interface to interact with the modelling framework SIMPLACE and to parse the results of simulations.
This package creates 3D animated, interactive visualizations that can be viewed in a web browser.
This package provides a collection of true type and open type Star Trek-themed fonts.
Calculates voter transitions comparing two elections, using the function solve.QP() in package quadprog'.
This package provides fitting routines for four versions of the Vitality family of mortality models.
Adds ... to a function's argument list so that it can tolerate non-matching arguments.
RetroShare is a Free and Open Source cross-platform, Friend-2-Friend and secure decentralised communication platform.
Custom script for Rofi that allows you to copy or fill passwords from your Lastpass vault.
This package estimates previously compiled regression models using the rstan package, which provides the R interface to the Stan C++ library for Bayesian estimation. Users specify models via the customary R syntax with a formula and data.frame plus some additional arguments for priors.
This package performs differential pattern analysis for Ribo-seq data. It identifies genes with significantly different patterns in the ribosome footprint between two conditions. RiboDiPA contains five major components including bam file processing, P-site mapping, data binning, differential pattern analysis and footprint visualization.
Easy-to-use functions for downloading air quality data from the Mexican National Air Quality Information System (SINAICA). Allows you to query pollution and meteorological parameters from more than a hundred monitoring stations located throughout Mexico. See <https://sinaica.inecc.gob.mx> for more information.
This package provides a novel numerical algorithm that provides functionality for estimating the exact 95% confidence interval of the location parameter in the random effects model, and is much faster than the naive method. Works best when the number of studies is between 6-20.
Retrieve, map and summarize data from the VertNet.org archives (<https://vertnet.org/>). Functions allow searching by many parameters, including taxonomic names, places, and dates. In addition, there is an interface for conducting spatially delimited searches, and another for requesting large datasets via email.
R^2 measure of explained variation under the semiparametric additive hazards model is estimated. The measure can be used as a measure of predictive capability and therefore it can be adopted in model selection process. Rava, D. and Xu, R. (2020) <arXiv:2003.09460>.
This R package provide functions that are used in the BREW3R workflow. This mainly contains a function that extend a gtf as GRanges using information from another gtf (also as GRanges). The process allows to extend gene annotation without increasing the overlap between gene ids.