This package provides a consistent API to pull United States Department of Agriculture census and survey data from the National Agricultural Statistics Service (NASS) QuickStats service.

Estimation of the SF-ACE, a Causal Inference estimand proposed in the paper "The Subtype-Free Average Causal Effect For Heterogeneous Disease Etiology" (soon on arXiv).

This package provides tools to deploy TensorFlow <https://www.tensorflow.org/> models across multiple services. Currently, it provides a local server for testing cloudml compatible services.

This package provides a set of basic tools to transform functions into functions with input validation checks, in a manner suitable for both programmatic and interactive use.

Fetch statistics about views, downloads and data volume from Zenodo deposits. The package collects a Zenodo (<https://zenodo.org>) deposit file information, respecting the website scrapping policies.

Use hail via basilisk when appropriate, or via reticulate. This package can be used in terra.bio to interact with UK Biobank resources processed by hail.is.

This package is a wrapper of Integrative Genomics Viewer (IGV). It comprises an htmlwidget version of IGV. It can be used as a module in Shiny apps.

This is a collection of utility functions that allow to perform exploration of and calculations to RNA sequencing data, in a modular, pipe-friendly and tidy fashion.

This package provides a light weight implementation of the standard distribution functions for the inverse gamma distribution, wrapping those for the gamma distribution in the stats package.

This package allows you to install specified versions of R packages hosted on CRAN and provides functions to list available versions and the versions of currently installed packages.

Read large text files by splitting them in smaller files. This package also provides some convenient wrappers around fread() and fwrite() from package data.table.

This package provides an implementation of bee swarm plots. The bee swarm plot is a one-dimensional scatter plot like stripchart, but with closely-packed, non-overlapping points.

This package provides a command line parser to be used with Rscript to write shebang scripts that gracefully accept positional and optional arguments and automatically generate usage notices.

Guard is a command line tool to easily handle events on file system modifications. Guard automates various tasks by running custom rules whenever file or directories are modified.

Excon was designed to be simple, fast and performant. It works great as a general HTTP(s) client and is particularly well suited to usage in API clients.

Provide seamless support for right-to-left (RTL) languages, such as Persian and Arabic, in R Markdown documents and LaTeX output. It includes functions and hooks that enable easy integration of RTL language content, allowing users to create documents that adhere to RTL writing conventions. For in-depth insights into dynamic documents and the knitr package, consider referring to Xie, Y (2014) <ISBN: 978-1-482-20353-0>.

This package provides tools for response surface analysis, using a comparative framework that identifies best-fitting solutions across 37 families of polynomials. Many of these tools are based upon and extend the RSA package, by testing a larger scope of polynomials (+27 families), more diverse response surface probing techniques (+acceleration points), more plots (+line of congruence, +line of incongruence, both with extrema), and other useful functions for exporting results.

Robust methods for high-dimensional data, in particular linear model selection techniques based on least angle regression and sparse regression. Specifically, the package implements robust least angle regression (Khan, Van Aelst & Zamar, 2007; <doi:10.1198/016214507000000950>), (robust) groupwise least angle regression (Alfons, Croux & Gelper, 2016; <doi:10.1016/j.csda.2015.02.007>), and sparse least trimmed squares regression (Alfons, Croux & Gelper, 2013; <doi:10.1214/12-AOAS575>).

This package provides functions for conducting robust variance estimation (RVE) meta-regression using both large and small sample RVE estimators under various weighting schemes. These methods are distribution free and provide valid point estimates, standard errors and hypothesis tests even when the degree and structure of dependence between effect sizes is unknown. Also included are functions for conducting sensitivity analyses under correlated effects weighting and producing RVE-based forest plots.

R functions to read EURING data and analyse re-encounter data of birds marked by metal rings. For a tutorial, go to <doi:10.1080/03078698.2014.933053>.

Determines effective sample size of a parametric prior distribution in Bayesian models. For a web-based Shiny application related to this package, see <https://implement.shinyapps.io/bayesess/>.

Implementation of Hurst exponent estimators based on complex-valued lifting wavelet energy from Knight, M. I and Nunes, M. A. (2018) <doi:10.1007/s11222-018-9820-8>.

This package provides a set of common functions to be used for displaying messages, checking variables, finding absolute paths, starting applications, etc. More functions will be added later.

This package provides iterators for combinations, permutations, subsets, and Cartesian product, which allow one to go through all elements without creating a huge set of all possible values.