Phangorn is a package for phylogenetic analysis in R. It supports estimation of phylogenetic trees and networks using Maximum Likelihood, Maximum Parsimony, distance methods and Hadamard conjugation.
The R kernel for the Jupyter environment executes R code which the front-end (Jupyter Notebook or other front-ends) submits to the kernel via the network.
The goal of this script is to provide a fast and lightweight script to enable responsive web designs in browsers that don't support CSS3 Media Queries.
Rosegarden is a music composition and editing environment based around a MIDI sequencer that features a rich understanding of music notation and includes basic support for digital audio.
This library provides Ruby qFFI bindings to the libsass library. This enables rendering SASS from Ruby code.
The matchBox package enables comparing ranked vectors of features, merging multiple datasets, removing redundant features, using CAT-plots and Venn diagrams, and computing statistical significance.
This is a simple data package including various data sets derived from the estrogen data for use with the puma (Propagating Uncertainty in Microarray Analysis) package.
Ularcirc reads in STAR aligned splice junction files and provides visualisation and analysis tools for splicing analysis. Users can assess backsplice junctions and forward canonical junctions.
Package encapsulates standard expressions for distances, times, luminosities, and other quantities useful in observational cosmology, including molecular line observations. Currently coded for a flat universe only.
This package provides the ability to create interaction maps, discover CNV map domains (edges), gene annotate interactions, and create interactive visualizations of these CNV interaction maps.
This package provides documentation in form of a common vignette to packages distr', distrEx', distrMod', distrSim', distrTEst', distrTeach', and distrEllipse'.
This package provides methods by Steinhauser et al. (2016) <DOI:10.1186/s12874-016-0196-1> for meta-analysis of diagnostic accuracy studies with several cutpoints.
This package provides additional functions for creating beautiful tables with gt'. The functions are generally wrappers around boilerplate or adding opinionated niche capabilities and helpers functions.
This package contains functions to estimate a penalized regression model using 3CoSE algorithm, see Weber, Striaukas, Schumacher Binder (2018) <doi:10.2139/ssrn.3211163>.
An implementation of the Input-Output model developed by Wassily Leontief that represents the interdependencies between different sectors of a national economy or different regional economies.
Reads raw files from Li-COR gas analyzers and produces a dataframe that can directly be used with fluxible <https://cran.r-project.org/package=fluxible>.
Conveniently log everything you type into the R console. Logs are are stored as tidy data frames which can then be analyzed using tidyverse style tools.
To create maps from tiles, maptiles downloads, composes and displays tiles from a large number of providers (e.g. OpenStreetMap', Stadia', Esri', CARTO', or Thunderforest').
Plotting toolbox for 2D oceanographic data (satellite data, sea surface temperature, chlorophyll, ocean fronts & bathymetry). Recognized classes and formats include netcdf, Raster, .nc and .gz files.
The identity provider ['OneLogin']<http://onelogin.com> is used for authentication via Single Sign On (SSO). This package provides an R interface to their API.
Functionality to handle and project lat-long coordinates, easily download background maps and add a correct scale bar to OpenStreetMap plots in any map projection.
Global univariate minimization of Lipschitz functions is performed by using Pijavski method, which was published in Pijavski (1972) <DOI:10.1016/0041-5553(72)90115-2>.
Automatically create a webserver from annotated R files or by building it up programmatically. Provides automatic OpenAPI documentation, input handling, async support, and middleware support.
This package provides a very bare-bones interface to use the Metropolis-Hastings Monte Carlo Markov Chain algorithm. It is suitable for teaching and testing purposes.