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r-shiny-gn 1.10.0
Dependencies: js-datatables@1.10.19 js-selectize@0.12.6 js-strftime@0.10.0 js-highlight@9.12.0
Propagated dependencies: r-bslib@0.9.0 r-cachem@1.1.0 r-commonmark@1.9.5 r-crayon@1.5.3 r-ellipsis@0.3.2 r-fastmap@1.2.0 r-fontawesome@0.5.3 r-glue@1.8.0 r-htmltools@0.5.8.1 r-httpuv@1.6.16 r-jsonlite@2.0.0 r-later@1.4.2 r-lifecycle@1.0.4 r-mime@0.13 r-promises@1.3.3 r-r6@2.6.1 r-rlang@1.1.6 r-sourcetools@0.1.7-1 r-withr@3.0.2 r-xtable@1.8-4
Channel: gn-bioinformatics
Location: gn/packages/r-shiny.scm (gn packages r-shiny)
Home page: https://shiny.rstudio.com
Licenses: Artistic License 2.0
Synopsis: Easy interactive web applications with R
Description:

Makes it incredibly easy to build interactive web applications with R. Automatic "reactive" binding between inputs and outputs and extensive prebuilt widgets make it possible to build beautiful, responsive, and powerful applications with minimal effort.

r-brassica 1.0.2
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=brassica
Licenses: GPL 3
Synopsis: 1970s BASIC Interpreter
Description:

Executes BASIC programs from the 1970s, for historical and educational purposes. This enables famous examples of early machine learning, artificial intelligence, natural language processing, cellular automata, and so on, to be run in their original form.

r-cycloids 1.0.2
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=cycloids
Licenses: GPL 3
Synopsis: Tools for Calculating Hypocycloids, Epicycloids, Hypotrochoids, and Epitrochoids
Description:

This package provides tools for calculating coordinate representations of hypocycloids, epicyloids, hypotrochoids, and epitrochoids (altogether called cycloids here) with different scaling and positioning options. The cycloids can be visualised with any appropriate graphics function in R.

r-dfoliatr 0.3.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.2.1 r-rlang@1.1.6 r-purrr@1.0.4 r-magrittr@2.0.3 r-glue@1.8.0 r-ggpubr@0.6.0 r-ggplot2@3.5.2 r-forcats@1.0.0 r-dplyr@1.1.4 r-dplr@1.7.8
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://chguiterman.github.io/dfoliatR/
Licenses: GPL 3+
Synopsis: Detection and Analysis of Insect Defoliation Signals in Tree Rings
Description:

This package provides tools to identify, quantify, analyze, and visualize growth suppression events in tree rings that are often produced by insect defoliation. Described in Guiterman et al. (2020) <doi:10.1016/j.dendro.2020.125750>.

r-diconvex 1.0.0
Propagated dependencies: r-lpsolveapi@5.5.2.0-17.14
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DIconvex
Licenses: GPL 2
Synopsis: Finding Patterns of Monotonicity and Convexity in Data
Description:

Given an initial set of points, this package minimizes the number of elements to discard from this set such that there exists at least one monotonic and convex mapping within pre-specified upper and lower bounds.

r-digitize 0.0.4
Propagated dependencies: r-readbitmap@0.1.5
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/tpoisot/digitize/
Licenses: GPL 2+
Synopsis: Use Data from Published Plots in R
Description:

Import data from a digital image; it requires user input for calibration and to locate the data points. The end result is similar to DataThief and other other programs that digitize published plots or graphs.

r-dizutils 0.1.3
Propagated dependencies: r-xml2@1.3.8 r-rpresto@1.4.7 r-rpostgres@1.4.8 r-rjsonio@2.0.0 r-rjdbc@0.2-10 r-psych@2.5.3 r-httr@1.4.7 r-hmisc@5.2-3 r-diztools@1.0.2 r-dbi@1.2.3 r-data-table@1.17.4
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/miracum/misc-dizutils
Licenses: GPL 3
Synopsis: Utilities for 'DIZ' R Package Development
Description:

Utility functions used for the R package development infrastructure inside the data integration centers ('DIZ') to standardize and facilitate repetitive tasks such as setting up a database connection or issuing notification messages and to avoid redundancy.

r-fakemake 1.11.1
Propagated dependencies: r-makefiler@1.0 r-igraph@2.1.4 r-fritools@4.5.0
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://gitlab.com/fvafrcu/fakemake
Licenses: FreeBSD
Synopsis: Mock the Unix Make Utility
Description:

Use R as a minimal build system. This might come in handy if you are developing R packages and can not use a proper build system. Stay away if you can (use a proper build system).

r-geonames 0.999
Propagated dependencies: r-rjson@0.2.23
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=geonames
Licenses: GPL 3
Synopsis: Interface to the "Geonames" Spatial Query Web Service
Description:

The web service at <https://www.geonames.org/> provides a number of spatial data queries, including administrative area hierarchies, city locations and some country postal code queries. A (free) username is required and rate limits exist.

r-ggtricks 0.1.0
Propagated dependencies: r-ggplot2@3.5.2 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://github.com/AbdoulMa/ggtricks
Licenses: Expat
Synopsis: Create Sector and Other Charts Easily Using Grammar of Graphics
Description:

This package provides a collection of several geoms to create graphics, using ggplot2 and the Cartesian coordinate system. You use the familiar mapping Grammar of Graphics without the need to do another transformation into polar coordinates.

r-interva5 1.1.3
Propagated dependencies: r-readxl@1.4.5 r-curl@6.2.3
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=InterVA5
Licenses: GPL 3
Synopsis: Replicate and Analyse 'InterVA5'
Description:

This package provides an R version of the InterVA5 software (<http://www.byass.uk/interva/>) for coding cause of death from verbal autopsies. It also provides simple graphical representation of individual and population level statistics.

r-inctools 1.0.15
Propagated dependencies: r-tmvtnorm@1.6 r-tibble@3.2.1 r-rlang@1.1.6 r-pracma@2.4.4 r-plyr@1.8.9 r-magrittr@2.0.3 r-glm2@1.2.1 r-ggplot2@3.5.2 r-foreach@1.5.2 r-dplyr@1.1.4 r-doparallel@1.0.17 r-cubature@2.1.3 r-binom@1.1-1.1
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: http://www.incidence-estimation.org/page/inctools
Licenses: GPL 3
Synopsis: Incidence Estimation Tools
Description:

This package provides tools for estimating incidence from biomarker data in cross- sectional surveys, and for calibrating tests for recent infection. Implements and extends the method of Kassanjee et al. (2012) <doi:10.1097/EDE.0b013e3182576c07>.

r-iperform 0.0.3
Propagated dependencies: r-matrixstats@1.5.0 r-lubridate@1.9.4
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=iperform
Licenses: GPL 3
Synopsis: Time Series Performance
Description:

This package provides a tool to calculate the performance of a time series in a specific date or period. It is more intended for data analysis in the fields of finance, banking, telecommunications or operational marketing.

r-lifepack 0.1.0
Propagated dependencies: r-rcpparmadillo@14.4.3-1 r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=lifepack
Licenses: GPL 3
Synopsis: Insurance Reserve Calculations
Description:

Calculates insurance reserves and equivalence premiums using advanced numerical methods, including the Runge-Kutta algorithm and product integrals for transition probabilities. This package is useful for actuarial analyses and life insurance modeling, facilitating accurate financial projections.

r-mlbplotr 1.1.0
Propagated dependencies: r-scales@1.4.0 r-rlang@1.1.6 r-magrittr@2.0.3 r-magick@2.8.6 r-lifecycle@1.0.4 r-gt@1.0.0 r-ggplot2@3.5.2 r-data-table@1.17.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/camdenk/mlbplotR
Licenses: Expat
Synopsis: Create 'ggplot2' and 'gt' Visuals with Major League Baseball Logos
Description:

This package provides tools to help visualize Major League Baseball analysis in ggplot2 and gt'. You provide team/player information and mlbplotR will transform that information into team colors, logos, or player headshots for graphics.

r-micropop 1.6
Propagated dependencies: r-visnetwork@2.1.2 r-testthat@3.2.3 r-desolve@1.40
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://besjournals.onlinelibrary.wiley.com/doi/full/10.1111/2041-210X.12873
Licenses: GPL 3 FSDG-compatible
Synopsis: Process-Based Modelling of Microbial Populations
Description:

Modelling interacting microbial populations - example applications include human gut microbiota, rumen microbiota and phytoplankton. Solves a system of ordinary differential equations to simulate microbial growth and resource uptake over time. This version contains network visualisation functions.

r-metatest 1.0-5
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=metatest
Licenses: GPL 2+ GPL 3+
Synopsis: Fit and Test Metaregression Models
Description:

Fits and tests meta regression models and generates a number of useful test statistics: next to t- and z-tests, the likelihood ratio, bartlett corrected likelihood ratio and permutation tests are performed on the model coefficients.

r-minidown 0.4.0
Propagated dependencies: r-xfun@0.52 r-sass@0.4.10 r-rmarkdown@2.29 r-mime@0.13 r-knitr@1.50 r-katex@1.5.0 r-htmltools@0.5.8.1
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://minidown.atusy.net
Licenses: Expat
Synopsis: Create Simple Yet Powerful HTML Documents with Light Weight CSS Frameworks
Description:

Create minimal, responsive, and style-agnostic HTML documents with the lightweight CSS frameworks such as sakura', Water.css', and spcss'. Powerful features include table of contents floating as a sidebar, folding codes and results, and more.

r-metafuse 2.0-1
Propagated dependencies: r-matrix@1.7-3 r-mass@7.3-65 r-glmnet@4.1-8 r-evd@2.3-7.1
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=metafuse
Licenses: GPL 2
Synopsis: Fused Lasso Approach in Regression Coefficient Clustering
Description:

Fused lasso method to cluster and estimate regression coefficients of the same covariate across different data sets when a large number of independent data sets are combined. Package supports Gaussian, binomial, Poisson and Cox PH models.

r-ph2bayes 0.0.2
Propagated dependencies: r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=ph2bayes
Licenses: GPL 3
Synopsis: Bayesian Single-Arm Phase II Designs
Description:

An implementation of Bayesian single-arm phase II design methods for binary outcome based on posterior probability (Thall and Simon (1994) <doi:10.2307/2533377>) and predictive probability (Lee and Liu (2008) <doi:10.1177/1740774508089279>).

r-pairwise 0.6.1-0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pairwise
Licenses: GPL 3
Synopsis: Rasch Model Parameters by Pairwise Algorithm
Description:

This package performs the explicit calculation -- not estimation! -- of the Rasch item parameters for dichotomous and polytomous item responses, using a pairwise comparison approach. Person parameters (WLE) are calculated according to Warm's weighted likelihood approach.

r-quartose 0.1.0
Propagated dependencies: r-rlang@1.1.6 r-purrr@1.0.4 r-knitr@1.50 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/q.scm (guix-cran packages q)
Home page: https://github.com/djnavarro/quartose
Licenses: Expat
Synopsis: Dynamically Generate Quarto Syntax
Description:

This package provides helper functions to work programmatically within a quarto document. It allows the user to create section headers, tabsets, divs, and spans, and formats these objects into quarto syntax when printed into a document.

r-simphony 1.0.3
Propagated dependencies: r-foreach@1.5.2 r-data-table@1.17.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://simphony.hugheylab.org
Licenses: GPL 2
Synopsis: Simulating Large-Scale, Rhythmic Data
Description:

This package provides a tool for simulating rhythmic data: transcriptome data using Gaussian or negative binomial distributions, and behavioral activity data using Bernoulli or Poisson distributions. See Singer et al. (2019) <doi:10.7717/peerj.6985>.

r-smfilter 1.0.3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/yukai-yang/SMFilter
Licenses: GPL 3
Synopsis: Filtering Algorithms for the State Space Models on the Stiefel Manifold
Description:

This package provides the filtering algorithms for the state space models on the Stiefel manifold as well as the corresponding sampling algorithms for uniform, vector Langevin-Bingham and matrix Langevin-Bingham distributions on the Stiefel manifold.

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