This is a package that can be used for quality control of Affymetrix GeneChip expression data and reproducibility analysis of human whole genome chips with the MAQC reference datasets.

This is an R package for pre-processing of flow and mass cytometry data. This package includes panel editing or renaming for FCS files, bead-based normalization and debarcoding.

This package contains the core survival analysis routines, including definition of Surv objects, Kaplan-Meier and Aalen-Johansen (multi-state) curves, Cox models, and parametric accelerated failure time models.

This package provides a command line parser inspired by Python's optparse library to be used with Rscript to write shebang scripts that accept short and long options.

This library provides a datatype which can be interpreted by apply-refact. It exists as a separate library so that applications can specify refactorings without depending on GHC.

This package provides a utility library intended at providing configurable reader macros for common tasks such as accessors, hash-tables, sets, uiop:run-program, arrays and a few others.

This gem makes mathematical operations more precise in Ruby and integrates other mathematical standard libraries. Prior to Ruby 2.5, mathn was part of the Ruby standard library.

This gem is a library that provides trigonometric and transcendental functions for complex numbers. The functions in this module accept integers, floating-point numbers or complex numbers as arguments.

Brings together annotation resources from the various EuPathDB databases (PlasmoDB, ToxoDB, TriTrypDB, etc.) and makes them available in R using the AnnotationHub framework.

R functions to read EURING data and analyse re-encounter data of birds marked by metal rings. For a tutorial, go to <doi:10.1080/03078698.2014.933053>.

Bayesian fitting of projection pursuit regression model. Built to handle continuous and categorical inputs and scalar output (Collins et al., 2023 <DOI:10.1007/s11222-023-10334-z>).

Determines effective sample size of a parametric prior distribution in Bayesian models. For a web-based Shiny application related to this package, see <https://implement.shinyapps.io/bayesess/>.

Implementation of Hurst exponent estimators based on complex-valued lifting wavelet energy from Knight, M. I and Nunes, M. A. (2018) <doi:10.1007/s11222-018-9820-8>.

Shiny app for creating interactive consort flow diagrams and other types of flow diagrams, see Moher, Schulz and Altman (2001) <doi:10.1016/S0140-6736(00)04337-3>.

This package provides a set of common functions to be used for displaying messages, checking variables, finding absolute paths, starting applications, etc. More functions will be added later.

This package provides iterators for combinations, permutations, subsets, and Cartesian product, which allow one to go through all elements without creating a huge set of all possible values.

Works as a virtual CRAN snapshot for source packages. It automatically downloads and installs tar.gz files with dependencies, all of which were available on a specific day.

This package implements several methods for False Discovery Rate control based on the e-Closure Principle, in particular the Closed e-Benjamini-Hochberg and Closed Benjamini-Yekutieli procedures.

Helps access various Fantasy Football APIs by handling authentication and rate-limiting, forming appropriate calls, and returning tidy dataframes which can be easily connected to other data sources.

This package provides a generalized method to predict and report gender from Brazilian first names using the Brazilian Institute of Geography and Statistics Census data and neural networks.

This package provides functions for survey data including svydesign objects from the survey package that call ggplot2 to make bar charts, histograms, boxplots, and hexplots of survey data.

Fits weighted quantile sum (WQS) regressions for one or more chemical groups with continuous or binary outcomes. Wheeler D, Czarnota J.(2016) <doi:10.1289/isee.2016.4698>.

Create and view tickets in gitea', a self-hosted git service <https://gitea.io>, using an RStudio addin, and use helper functions to publish documentation and use git.

For environmental chemists, ecologists, researchers and agricultural scientists to understand the dissipation kinetics, calculate the half-life periods and rate constants of compounds, pesticides, contaminants in different matrices.