Fits multi-way component models via alternating least squares algorithms with optional constraints. Fit models include N-way Canonical Polyadic Decomposition, Individual Differences Scaling, Multiway Covariates Regression, Parallel Factor Analysis (1 and 2), Simultaneous Component Analysis, and Tucker Factor Analysis.
Fits the neighboring models of a fitted structural equation model and assesses the model uncertainty of the fitted model based on BIC posterior probabilities, using the method presented in Wu, Cheung, and Leung (2020) <doi:10.1080/00273171.2019.1574546>.
This is a shiny module that presents a file picker user interface to get an Excel file name, and reads the Excel sheets using readxl package and returns the resulting sheet(s) as a vector and data in dataframe(s).
This package implements routines for metagenome sample taxonomy assignments collection, aggregation, and visualization. Accepts the EDGE-formatted output from GOTTCHA/GOTTCHA2, BWA, Kraken, MetaPhlAn
, DIAMOND, and Pangia. Produces SVG and PDF heatmap-like plots comparing taxa abundances across projects.
This package provides a tool which aims to help evaluate the effect of external borrowing using an integrated approach described in Lewis et al., (2019) <doi:10.1080/19466315.2018.1497533> that combines propensity score and Bayesian dynamic borrowing methods.
This package provides functions for simulating from and fitting the latent hidden Markov models for response process data (Tang, 2024) <doi:10.1007/s11336-023-09938-1>. It also includes functions for simulating from and fitting ordinary hidden Markov models.
Calculate point estimates and their standard errors in complex household surveys using bootstrap replicates. Bootstrapping considers survey design with a rotating panel. A comprehensive description of the methodology can be found under <https://statistikat.github.io/surveysd/articles/methodology.html>.
This package implements the algorithm described in Guo, H., and Li, J., "scSorter
: assigning cells to known cell types according to known marker genes". Cluster cells to known cell types based on marker genes specified for each cell type.
Programmatic access to Flipside Crypto data via the Compass RPC API: <https://api-docs.flipsidecrypto.xyz/>. As simple as auto_paginate_query()
but with core functions as needed for troubleshooting. Note, 0.1.1 support deprecated 2023-05-31.
This package provides a search interface to look up terms on Google', Bing', DuckDuckGo
', Startpage', Ecosia', rseek', Twitter', StackOverflow
', RStudio Community', GitHub
', and BitBucket
'. Upon searching, a browser window will open with the aforementioned search results.
Interactively gate points on a scatter plot. Interactively drawn gates are recorded and can be applied programmatically to reproduce results exactly. Programmatic gating is based on the package gatepoints by Wajid Jawaid (who is also an author of this package).
This package provides functions such as str_crush()
, add_missing_column()
, coalesce_data()
and drop_na_all()
that complement tidyverse functionality or functions that provide alternative behaviors such as if_else2()
and str_detect2()
.
This is a package for creating and running Agent Based Models (ABM). It provides a set of base classes with core functionality to allow bootstrapped models. For more intensive modeling, the supplied classes can be extended to fit researcher needs.
httpcode
provides functionality for finding and explaining the meaning of HTTP
status codes. Functions are included for searching for codes by full or partial number, by message, and to get appropriate dog and cat images for many status codes.
Robe can provide information on loaded classes and modules in Ruby code, as well as where methods are defined. This allows the user to jump to method definitions, modules and classes, display method documentation and provide method and constant name completion.
Regression-discontinuity (RD) designs are quasi-experimental research designs popular in social, behavioral and natural sciences. The RD design is usually employed to study the (local) causal effect of a treatment, intervention or policy. This package provides tools for data-driven graphical and analytical statistical inference in RD designs: rdrobust()
to construct local-polynomial point estimators and robust confidence intervals for average treatment effects at the cutoff in Sharp, Fuzzy and Kink RD settings, rdbwselect()
to perform bandwidth selection for the different procedures implemented, and rdplot()
to conduct exploratory data analysis (RD plots).
Search by keywords in R packages, task views, CRAN, the web and display the results in the console or in txt, html or pdf files. Download the package documentation (html index, README, NEWS, pdf manual, vignettes, source code, binaries) with a single instruction. Visualize the package dependencies and CRAN checks. Compare the package versions, unload and install the packages and their dependencies in a safe order. Explore CRAN archives. Use the above functions for task view maintenance. Access web search engines from the console thanks to 80+ bookmarks. All functions accept standard and non-standard evaluation.
Clang is a compiler front end for the C, C++, Objective-C and Objective-C++ programming languages. It uses LLVM as its back end. The Clang project includes the Clang front end, the Clang static analyzer, and several code analysis tools.
This package implements several new association indices that can control for various types of errors. Also includes existing association indices and functions for simulating the effects of different rates of error on estimates of association strength between individuals using each method.
This package provides tools for geometric morphometric analysis. The package includes tools of virtual anthropology to align two not articulated parts belonging to the same specimen, to build virtual cavities as endocast (Profico et al, 2021 <doi:10.1002/ajpa.24340>).
The archdata package provides several types of data that are typically used in archaeological research. It provides all of the data sets used in "Quantitative Methods in Archaeology Using R" by David L Carlson, one of the Cambridge Manuals in Archaeology.
This package provides functions for working with code lists and vectors with codes. These are an alternative for factor that keep track of both the codes and labels. Methods allow for transforming between codes and labels. Also supports hierarchical code lists.
Interface with and extract data from the United Nations Comtrade API <https://comtradeplus.un.org/>. Comtrade provides country level shipping data for a variety of commodities, these functions allow for easy API query and data returned as a tidy data frame.
Collection of convenience functions to make working with administrative records easier and more consistent. Includes functions to clean strings, and identify cut points. Also includes three example data sets of administrative education records for learning how to process records with errors.