Fits and tests meta regression models and generates a number of useful test statistics: next to t- and z-tests, the likelihood ratio, bartlett corrected likelihood ratio and permutation tests are performed on the model coefficients.

This package performs the explicit calculation -- not estimation! -- of the Rasch item parameters for dichotomous and polytomous item responses, using a pairwise comparison approach. Person parameters (WLE) are calculated according to Warm's weighted likelihood approach.

An implementation of Bayesian single-arm phase II design methods for binary outcome based on posterior probability (Thall and Simon (1994) <doi:10.2307/2533377>) and predictive probability (Lee and Liu (2008) <doi:10.1177/1740774508089279>).

This package provides helper functions to work programmatically within a quarto document. It allows the user to create section headers, tabsets, divs, and spans, and formats these objects into quarto syntax when printed into a document.

This package provides the filtering algorithms for the state space models on the Stiefel manifold as well as the corresponding sampling algorithms for uniform, vector Langevin-Bingham and matrix Langevin-Bingham distributions on the Stiefel manifold.

Stepwise models for the optimal linear combination of continuous variables in binary classification problems under Youden Index optimisation. Information on the models implemented can be found at Aznar-Gimeno et al. (2021) <doi:10.3390/math9192497>.

Automatically sets the value of options("width") when the terminal emulator is resized. The functions of this package only work if R is compiled for Unix systems and it is running interactively in a terminal emulator.

This package provides a tool for simulating rhythmic data: transcriptome data using Gaussian or negative binomial distributions, and behavioral activity data using Bernoulli or Poisson distributions. See Singer et al. (2019) <doi:10.7717/peerj.6985>.

This package provides methods for statistical disclosure control in tabular data such as primary and secondary cell suppression as described for example in Hundepol et al. (2012) <doi:10.1002/9781118348239> are covered in this package.

This package provides a set of tools for descriptive and predictive analysis of time series data. That includes functions for interactive visualization of time series objects and as well utility functions for automation time series forecasting.

Analyze lines of R code using tidy principles. This allows you to input lines of R code and output a data frame with one row per function included. Additionally, it facilitates code classification via included lexicons.

This package provides functions for finding and pulling data from the Wisconsin Department of Natural Resources ArcGIS REST APIs <https://dnrmaps.wi.gov/arcgis/rest/services> and <https://dnrmaps.wi.gov/arcgis2/rest/services>.

An intuitive and explainable metric of Feature Importance for Classification Problems. Resolution Index measures the extent to which a Feature clusters different classes when data is sorted on it. User provides a DataFrame, column name of the Class, sample size and number of iterations used for calculation. Resolution Index for each Feature is returned, which can be effectively used to rank Features and reduce Dimensionality of Training data. For more details on Feature Selection see Theng and Bhoyar (2023) <doi:10.1007/s10115-023-02010-5>.

This package manages the installation of CMake for building Bioconductor packages. This avoids the need for end-users to manually install CMake on their system. No action is performed if a suitable version of CMake is already available.

This is an R package for imputing dropout events. Many statistical methods in cell type identification, visualization and lineage reconstruction do not account for dropout events. DrImpute can improve the performance of such software by imputing dropout events.

Visualise complex relations in texts. This is done by providing functionalities for displaying text co-occurrence networks, text correlation networks, dependency relationships as well as text clustering. Feel free to join the effort of providing interesting text visualisations.

This package provides support for rendering of formatted text using Grid graphics. Text can be formatted via a minimal subset of Markdown, HTML, and inline CSS directives, and it can be rendered both with and without word wrap.

This package provides a graphical display of a correlation matrix or general matrix. It also contains some algorithms to do matrix reordering. In addition, corrplot is good at details, including choosing color, text labels, color labels, layout, etc.

This package provides NetBSD as rumpkernel for the GNU/Hurd, so that the Hurd may be installed on iron. Using this rumpkernel package, the hurd package's rumpdisk can be built which provides the pci.arbiter and rumpdisk servers.

transite is a computational method that allows comprehensive analysis of the regulatory role of RNA-binding proteins in various cellular processes by leveraging preexisting gene expression data and current knowledge of binding preferences of RNA-binding proteins.

Retrieves open source airport data and provides tools to look up information, translate names into codes and vice-verse, as well as some basic calculation functions for measuring distances. Data is licensed under the Open Database License.

This package provides a set of R functions and data sets for the book "Understanding Computational Bayesian Statistics." This book was written by Bill (WM) Bolstad and published in 2009 by John Wiley & Sons (ISBN 978-0470046098).

Fits a Bayesian zero-inflated Bernoulli regression model handling (potentially) different covariates for the zero-inflated and non zero-inflated parts. See Moriña D, Puig P, Navarro A. (2021) <doi:10.1186/s12874-021-01427-2>.

Utilities dedicated to the analysis of biological sequences by metric MultiDimensional Scaling with projection of supplementary data. It contains functions for reading multiple sequence alignment files, calculating distance matrices, performing metric multidimensional scaling and visualizing results.