_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/
r-ncdfflow 2.58.0
Propagated dependencies: r-bh@1.90.0-1 r-biobase@2.72.0 r-biocgenerics@0.58.1 r-cpp11@0.5.5 r-flowcore@2.24.0 r-rhdf5lib@2.0.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/ncdfFlow/
Licenses: Artistic License 2.0
Build system: r
Synopsis: HDF5 based storage for flow cytometry data
Description:

This package provides HDF5 storage based methods and functions for manipulation of flow cytometry data.

r-flowcore 2.24.0
Propagated dependencies: r-bh@1.90.0-1 r-biobase@2.72.0 r-biocgenerics@0.58.1 r-cpp11@0.5.5 r-cytolib@2.24.0 r-matrixstats@1.5.0 r-rcpp@1.1.1-1.1 r-rprotobuflib@2.24.0 r-s4vectors@0.50.1
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/flowCore
Licenses: Artistic License 2.0
Build system: r
Synopsis: Basic structures for flow cytometry data
Description:

This package provides S4 data structures and basic functions to deal with flow cytometry data.

r-cellchat 1.0.0-1.21edd22
Propagated dependencies: r-biocgenerics@0.58.1 r-circlize@0.4.18 r-colorspace@2.1-2 r-complexheatmap@2.28.0 r-cowplot@1.2.0 r-dplyr@1.2.1 r-expm@1.0-0 r-fnn@1.1.4.1 r-forcats@1.0.1 r-future@1.70.0 r-future-apply@1.20.2 r-gg-gap@1.3 r-ggalluvial@0.12.6 r-ggplot2@4.0.3 r-ggrepel@0.9.8 r-igraph@2.3.1 r-irlba@2.3.7 r-magrittr@2.0.5 r-matrix@1.7-5 r-nmf@0.28 r-patchwork@1.3.2 r-pbapply@1.7-4 r-rcolorbrewer@1.1-3 r-rcpp@1.1.1-1.1 r-rcppeigen@0.3.4.0.2 r-reshape2@1.4.5 r-reticulate@1.46.0 r-rspectra@0.16-2 r-rtsne@0.17 r-scales@1.4.0 r-shape@1.4.6.1 r-sna@2.8 r-stringr@1.6.0 r-svglite@2.2.2
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://github.com/sqjin/CellChat
Licenses: GPL 3
Build system: r
Synopsis: Analysis of cell-cell communication from single-cell transcriptomics data
Description:

This package infers, visualizes and analyzes the cell-cell communication networks from scRNA-seq data.

r-nlstools 2.1-0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/lbbe-software/nlstools
Licenses: GPL 3
Build system: r
Synopsis: Tools for nonlinear regression analysis
Description:

Several tools for assessing the quality of fit of a gaussian nonlinear model are provided.

r-shinyace 0.4.4
Propagated dependencies: r-jsonlite@2.0.0 r-shiny@1.13.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/shinyAce/
Licenses: Expat
Build system: r
Synopsis: Ace editor bindings for Shiny
Description:

This package provides Ace editor bindings to enable a rich text editing environment within Shiny.

r-stepwise 0.3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://stat.sfu.ca/statgen/research/stepwise.html
Licenses: GPL 2+
Build system: r
Synopsis: Stepwise detection of recombination breakpoints
Description:

This package provides a stepwise approach to identifying recombination breakpoints in a genomic sequence alignment.

r-pheatmap 1.0.13
Propagated dependencies: r-gtable@0.3.6 r-rcolorbrewer@1.1-3 r-scales@1.4.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/pheatmap
Licenses: GPL 2+
Build system: r
Synopsis: Pretty heatmaps
Description:

This package provides an implementation of heatmaps that offers more control over dimensions and appearance.

ruby-erubi 1.11.0
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: https://github.com/jeremyevans/erubi
Licenses: Expat
Build system: ruby
Synopsis: ERB template engine for Ruby
Description:

Erubi is a ERB template engine for Ruby. It is a simplified fork of Erubis

ruby-crass 1.0.6
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: https://github.com/rgrove/crass
Licenses: Expat
Build system: ruby
Synopsis: Pure Ruby CSS parser
Description:

Crass is a pure Ruby CSS parser based on the CSS Syntax Level 3 spec.

r-apalyzer 1.26.0
Propagated dependencies: r-variantannotation@1.58.0 r-txdbmaker@1.8.0 r-tidyr@1.3.2 r-summarizedexperiment@1.42.0 r-s4vectors@0.50.1 r-rtracklayer@1.72.0 r-rsubread@2.26.0 r-rsamtools@2.28.0 r-rlang@1.2.0 r-repmis@0.5.1 r-ggrepel@0.9.8 r-ggplot2@4.0.3 r-genomicranges@1.64.0 r-genomicfeatures@1.64.0 r-genomicalignments@1.48.0 r-dplyr@1.2.1 r-deseq2@1.52.0
Channel: guix-bioc
Location: guix-bioc/packages/a.scm (guix-bioc packages a)
Home page: https://github.com/RJWANGbioinfo/APAlyzer/
Licenses: FSDG-compatible
Build system: r
Synopsis: toolkit for APA analysis using RNA-seq data
Description:

Perform 3'UTR APA, Intronic APA and gene expression analysis using RNA-seq data.

r-sctensor 2.22.0
Propagated dependencies: r-visnetwork@2.1.4 r-tagcloud@0.7.0 r-summarizedexperiment@1.42.0 r-singlecellexperiment@1.34.0 r-schex@1.26.0 r-s4vectors@0.50.1 r-rtensor@1.5.0 r-rsqlite@3.52.0 r-rmarkdown@2.31 r-reactomepa@1.56.0 r-reactome-db@1.96.0 r-plotrix@3.8-14 r-plotly@4.12.0 r-outliers@0.15 r-nntensor@1.4.0 r-meshr@2.18.0 r-meshdbi@1.48.0 r-knitr@1.51 r-igraph@2.3.1 r-heatmaply@1.6.0 r-gostats@2.78.0 r-ggplot2@4.0.3 r-dose@4.6.0 r-crayon@1.5.3 r-checkmate@2.3.4 r-cctensor@1.0.3 r-category@2.78.0 r-biocstyle@2.40.0 r-biocmanager@1.30.27 r-annotationhub@4.2.0 r-annotationdbi@1.74.0 r-abind@1.4-8
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: https://bioconductor.org/packages/scTensor
Licenses: Artistic License 2.0
Build system: r
Synopsis: Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition
Description:

The algorithm is based on the non-negative tucker decomposition (NTD2) of nnTensor.

r-switchde 1.38.0
Propagated dependencies: r-summarizedexperiment@1.42.0 r-singlecellexperiment@1.34.0 r-ggplot2@4.0.3 r-dplyr@1.2.1
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: https://github.com/kieranrcampbell/switchde
Licenses: GPL 2+
Build system: r
Synopsis: Switch-like differential expression across single-cell trajectories
Description:

Inference and detection of switch-like differential expression across single-cell RNA-seq trajectories.

r-ygs98cdf 2.18.0
Propagated dependencies: r-annotationdbi@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/y.scm (guix-bioc packages y)
Home page: https://bioconductor.org/packages/ygs98cdf
Licenses: LGPL 2.0+
Build system: r
Synopsis: ygs98cdf
Description:

This package provides a package containing an environment representing the YG_S98.cdf file.

r-acroname 0.1.0
Propagated dependencies: r-stringr@1.6.0 r-readr@2.2.0 r-r-utils@2.13.0 r-purrr@1.2.2 r-magrittr@2.0.5 r-hunspell@3.0.6 r-dplyr@1.2.1
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=acroname
Licenses: GPL 3
Build system: r
Synopsis: Engine for Acronyms and Initialisms
Description:

This package provides a tool for generating acronyms and initialisms from arbitrary text input.

r-bayesmix 0.7-6
Propagated dependencies: r-rjags@4-17 r-coda@0.19-4.1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://statmath.wu.ac.at/~gruen/BayesMix/
Licenses: GPL 2 GPL 3
Build system: r
Synopsis: Bayesian Mixture Models with JAGS
Description:

Fits finite mixture models of univariate Gaussian distributions using JAGS within a Bayesian framework.

r-crossval 1.0.5
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=crossval
Licenses: GPL 3+
Build system: r
Synopsis: Generic Functions for Cross Validation
Description:

This package contains generic functions for performing cross validation and for computing diagnostic errors.

r-codified 0.3.0
Propagated dependencies: r-tidyr@1.3.2 r-tibble@3.3.1 r-rlang@1.2.0 r-knitr@1.51 r-kableextra@1.4.0 r-dplyr@1.2.1 r-checkmate@2.3.4
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://ouhscbbmc.github.io/codified/
Licenses: Expat
Build system: r
Synopsis: Produce Standard/Formalized Demographics Tables
Description:

Augment clinical data with metadata to create output used in conventional publications and reports.

r-clustgeo 2.1
Propagated dependencies: r-spdep@1.4-2 r-sp@2.2-1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=ClustGeo
Licenses: GPL 2+
Build system: r
Synopsis: Hierarchical Clustering with Spatial Constraints
Description:

This package implements a Ward-like hierarchical clustering algorithm including soft spatial/geographical constraints.

r-mapstats 3.2
Propagated dependencies: r-ttutils@1.0-1.1 r-survey@4.5 r-sp@2.2-1 r-sf@1.1-1 r-reshape2@1.4.5 r-rcolorbrewer@1.1-3 r-lattice@0.22-9 r-hmisc@5.2-5 r-colorspace@2.1-2 r-classint@0.4-11
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=mapStats
Licenses: GPL 2+
Build system: r
Synopsis: Geographic Display of Survey Data Statistics
Description:

Automated calculation and visualization of survey data statistics on a color-coded (choropleth) map.

r-purrrlyr 0.0.10
Propagated dependencies: r-rcpp@1.1.1-1.1 r-purrr@1.2.2 r-magrittr@2.0.5 r-dplyr@1.2.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/hadley/purrrlyr
Licenses: GPL 3 FSDG-compatible
Build system: r
Synopsis: Tools at the Intersection of 'purrr' and 'dplyr'
Description:

Some functions at the intersection of dplyr and purrr that formerly lived in purrr'.

r-quadroot 0.2.1
Channel: guix-cran
Location: guix-cran/packages/q.scm (guix-cran packages q)
Home page: https://cran.r-project.org/package=QuadRoot
Licenses: GPL 2
Build system: r
Synopsis: Quadratic Root for any Quadratic Equation
Description:

It will assist the user to find simple quadratic roots from any quadratic equation.

r-stagepop 1.1-2
Propagated dependencies: r-pbsddesolve@1.13.7 r-desolve@1.42
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/HelenKettle/StagePop
Licenses: GPL 3 FSDG-compatible
Build system: r
Synopsis: Modelling the Population Dynamics of a Stage-Structured Species in Continuous Time
Description:

This package provides facilities to implement and run population models of stage-structured species...

r-sciviews 0.9-13.2
Propagated dependencies: r-ellipse@0.5.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/SciViews/SciViews
Licenses: GPL 2
Build system: r
Synopsis: SciViews - Main package
Description:

This package provides functions to install SciViews additions to R, and more tools.

r-readtext 0.92.1
Propagated dependencies: r-antiword@1.3.5 r-data-table@1.18.4 r-digest@0.6.39 r-httr@1.4.8 r-jsonlite@2.0.0 r-pdftools@3.9.0 r-pillar@1.11.1 r-readods@2.3.5 r-readxl@1.5.0 r-streamr@0.4.5 r-stringi@1.8.7 r-striprtf@0.6.0 r-xml2@1.5.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/quanteda/readtext
Licenses: GPL 3
Build system: r
Synopsis: Import and handling for plain and formatted text files
Description:

This package provides functions for importing and handling text files and formatted text files with additional meta-data, such including .csv, .tab, .json, .xml, .html, .pdf, .doc, .docx, .rtf, .xls, .xlsx, and others.

Page: 1…607608609610611…1369
Total packages: 32844