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r-pullword 0.3
Propagated dependencies: r-rcurl@1.98-1.17
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pullword
Licenses: LGPL 2.0+
Synopsis: R Interface to Pullword Service
Description:

R Interface to Pullword Service for natural language processing in Chinese. It enables users to extract valuable words from text by deep learning models. For more details please visit the official site (in Chinese) <http://www.pullword.com/>.

r-pedsuite 1.3.1
Propagated dependencies: r-verbalisr@0.7.2 r-segregatr@0.5.0 r-ribd@1.7.1 r-pedtools@2.8.2 r-pedprobr@1.0.1 r-pedmut@0.9.0 r-pedfamilias@0.2.4 r-pedbuildr@0.3.0 r-paramlink2@1.0.6 r-ibdsim2@2.3.1 r-forrel@1.8.1 r-dvir@3.3.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://magnusdv.github.io/pedsuite/
Licenses: GPL 3+
Synopsis: Easy Installation of the 'pedsuite' Packages for Pedigree Analysis
Description:

The pedsuite is a collection of packages for pedigree analysis, covering applications in forensic genetics, medical genetics and more. A detailed presentation of the pedsuite is given in the book Pedigree Analysis in R (Vigeland, 2021, ISBN: 9780128244302).

r-skylight 1.3
Propagated dependencies: r-rcpparmadillo@14.4.3-1 r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/bluegreen-labs/skylight
Licenses: AGPL 3
Synopsis: Simple Sky Illuminance Model
Description:

This package provides a tool to calculate sky illuminance values (in lux) for both sun and moon. The model is a translation of the Fortran code by Janiczek and DeYoung (1987) <https://archive.org/details/DTIC_ADA182110>.

r-survsens 1.1.0
Propagated dependencies: r-survival@3.8-3 r-reshape2@1.4.4 r-metr@0.18.2 r-interp@1.1-6 r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/Rong0707/survSens
Licenses: GPL 2
Synopsis: Sensitivity Analysis with Time-to-Event Outcomes
Description:

This package performs a dual-parameter sensitivity analysis of treatment effect to unmeasured confounding in observational studies with either survival or competing risks outcomes. Huang, R., Xu, R. and Dulai, P.S.(2020) <doi:10.1002/sim.8672>.

r-ssbtools 1.8.2
Propagated dependencies: r-matrix@1.7-3 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/statisticsnorway/ssb-ssbtools
Licenses: Expat
Synopsis: Algorithms and Tools for Tabular Statistics and Hierarchical Computations
Description:

Includes general data manipulation functions, algorithms for statistical disclosure control (Langsrud, 2024) <doi:10.1007/978-3-031-69651-0_6> and functions for hierarchical computations by sparse model matrices (Langsrud, 2023) <doi:10.32614/RJ-2023-088>.

r-sas7bdat 0.8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sas7bdat
Licenses: GPL 2+
Synopsis: sas7bdat Reverse Engineering Documentation
Description:

Documentation and prototypes for the earliest (circa 2010) open-source effort to reverse engineer the sas7bdat file format. The package includes a prototype reader for sas7bdat files. However, newer packages may contain more robust readers for sas7bdat files.

r-swissair 1.1.6
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SwissAir
Licenses: GPL 3+
Synopsis: Air Quality Data of Switzerland for One Year in 30 Min Resolution
Description:

Ozone, NOx (= Sum of nitrogen monoxide and nitrogen dioxide), nitrogen monoxide, ambient temperature, dew point, wind speed and wind direction at 3 sites around lake of Lucerne in Central Switzerland in 30 min time resolution for year 2004.

r-uniprotr 2.5.0
Propagated dependencies: r-tidyverse@2.0.0 r-stringr@1.5.1 r-scales@1.4.0 r-qdapregex@0.7.10 r-progress@1.2.3 r-plyr@1.8.9 r-networkd3@0.4.1 r-magrittr@2.0.3 r-magick@2.8.6 r-httr@1.4.7 r-htmlwidgets@1.6.4 r-gridextra@2.3 r-gprofiler2@0.2.3 r-ggsci@3.2.0 r-ggpubr@0.6.0 r-ggplot2@3.5.2 r-dplyr@1.1.4 r-data-tree@1.1.0 r-curl@6.2.3 r-alakazam@1.4.1
Channel: guix-cran
Location: guix-cran/packages/u.scm (guix-cran packages u)
Home page: https://github.com/Proteomicslab57357/UniprotR
Licenses: GPL 3
Synopsis: Retrieving Information of Proteins from Uniprot
Description:

Connect to Uniprot <https://www.uniprot.org/> to retrieve information about proteins using their accession number such information could be name or taxonomy information, For detailed information kindly read the publication <doi:10.1016/j.jprot.2019.103613>.

r-variosig 0.3-1
Propagated dependencies: r-testthat@3.2.3 r-sp@2.2-0 r-gstat@2.1-3
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=variosig
Licenses: GPL 3+
Synopsis: Testing Spatial Dependence Using Empirical Variogram
Description:

Applying Monte Carlo permutation to generate pointwise variogram envelope and checking for spatial dependence at different scales using permutation test. Empirical Brown's method and Fisher's method are used to compute overall p-value for hypothesis test.

r-chipseqr 1.62.0
Propagated dependencies: r-timsac@1.3.8-4 r-shortread@1.66.0 r-s4vectors@0.46.0 r-iranges@2.42.0 r-hilbertvis@1.66.1 r-genomicranges@1.60.0 r-fbasics@4041.97 r-biostrings@2.76.0 r-biocgenerics@0.54.0
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: https://bioconductor.org/packages/ChIPseqR
Licenses: GPL 2+
Synopsis: Identifying Protein Binding Sites in High-Throughput Sequencing Data
Description:

ChIPseqR identifies protein binding sites from ChIP-seq and nucleosome positioning experiments. The model used to describe binding events was developed to locate nucleosomes but should flexible enough to handle other types of experiments as well.

r-macsdata 1.16.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/MACSdata
Licenses: FSDG-compatible
Synopsis: Test datasets for the MACSr package
Description:

Test datasets from the MACS3 test examples are use in the examples of the `MACSr` package. All 9 datasets are uploaded to the `ExperimentHub`. The original data can be found at: https://github.com/macs3-project/MACS/.

r-cmdstanr 0.8.1.9000-1.a45d4f7
Propagated dependencies: r-checkmate@2.3.2 r-data-table@1.17.4 r-jsonlite@2.0.0 r-posterior@1.6.1 r-processx@3.8.6 r-r6@2.6.1 r-rlang@1.1.6 r-withr@3.0.2
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://github.com/stan-dev/cmdstanr
Licenses: Modified BSD
Synopsis: R interface to 'CmdStan'
Description:

This package provides a lightweight interface to Stan <https://mc-stan.org>. The CmdStanR interface is an alternative to RStan that calls the command line interface for compilation and running algorithms instead of interfacing with C++ via Rcpp'.

r-maptools 1.1-8
Propagated dependencies: r-foreign@0.8-90 r-lattice@0.22-7 r-sp@2.2-0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://r-forge.r-project.org/projects/maptools/
Licenses: GPL 2+ Expat
Synopsis: Tools for reading and handling spatial objects
Description:

This package provides a set of tools for manipulating and reading geographic data, in particular ESRI Shapefiles. It includes binary access to GSHHG shoreline files. The package also provides interface wrappers for exchanging spatial objects with other R packages.

r-climatol 4.2-0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: http://www.climatol.eu/
Licenses: GPL 2+
Synopsis: Climate tools
Description:

This package provides functions for the quality control, homogenization and missing data infilling of climatological series, and to obtain climatological summaries and grids from the results. Also functions to draw wind-roses and Walter&Lieth climate diagrams are included.

r-rdocdump 0.1.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/e-kotov/rdocdump
Licenses: Expat
Synopsis: Dump 'R' Package Source, Documentation, and Vignettes into One File
Description:

Dump source code, documentation and vignettes of an R package into a single file. Supports installed packages, tar.gz archives, and package source directories. If the package is not installed, only its source is automatically downloaded from CRAN for processing. The output is a single plain text file or a character vector, which is useful to ingest complete package documentation and source into a large language model (LLM) or pass it further to other tools, such as ragnar <https://github.com/tidyverse/ragnar> to create a Retrieval-Augmented Generation (RAG) workflow.

r-rstanbdp 0.0.3
Propagated dependencies: r-stanheaders@2.32.10 r-rstantools@2.4.0 r-rstan@2.32.7 r-rrcov@1.7-7 r-rcppparallel@5.1.10 r-rcppeigen@0.3.4.0.2 r-rcpp@1.0.14 r-mixtools@2.0.0.1 r-kernsmooth@2.23-26 r-bh@1.87.0-1 r-bayestestr@0.16.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rstanbdp
Licenses: GPL 3+
Synopsis: Bayesian Deming Regression for Method Comparison
Description:

Regression methods to quantify the relation between two measurement methods are provided by this package. The focus is on a Bayesian Deming regressions family. With a Bayesian method the Deming regression can be run in a traditional fashion or can be run in a robust way just decreasing the degree of freedom d.f. of the sampling distribution. With d.f. = 1 an extremely robust Cauchy distribution can be sampled. Moreover, models for dealing with heteroscedastic data are also provided. For reference see G. Pioda (2024) <https://piodag.github.io/bd1/>.

r-regtools 1.7.0
Propagated dependencies: r-text2vec@0.6.4 r-sandwich@3.1-1 r-rje@1.12.1 r-r-utils@2.13.0 r-polyreg@0.8.0 r-mvtnorm@1.3-3 r-mass@7.3-65 r-gtools@3.9.5 r-glmnet@4.1-8 r-fnn@1.1.4.1 r-data-table@1.17.4 r-car@3.1-3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/matloff/regtools
Licenses: GPL 2+
Synopsis: Regression and Classification Tools
Description:

This package provides tools for linear, nonlinear and nonparametric regression and classification. Novel graphical methods for assessment of parametric models using nonparametric methods. One vs. All and All vs. All multiclass classification, optional class probabilities adjustment. Nonparametric regression (k-NN) for general dimension, local-linear option. Nonlinear regression with Eickert-White method for dealing with heteroscedasticity. Utilities for converting time series to rectangular form. Utilities for conversion between factors and indicator variables. Some code related to "Statistical Regression and Classification: from Linear Models to Machine Learning", N. Matloff, 2017, CRC, ISBN 9781498710916.

rocdbg-api 6.2.2
Dependencies: libbacktrace@1.0-2.cdb64b6 hwdata@0.391 rocm-comgr@6.2.2 hipamd@6.2.2
Channel: guix-hpc
Location: amd/packages/rocm-libs.scm (amd packages rocm-libs)
Home page: https://github.com/ROCm/ROCdbgapi
Licenses: Expat
Synopsis: ROCm debugger API.
Description:

The AMD Debugger API is a library that provides all the support necessary for a debugger and other tools to perform low level control of the execution and inspection of execution state of AMD's commercially available GPU architectures.

r-auctionr 0.1.0
Propagated dependencies: r-numderiv@2016.8-1.1
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/ajmack/auctionr
Licenses: GPL 3
Synopsis: Estimate First-Price Auction Model
Description:

Estimates a first-price auction model with conditionally independent private values as described in MacKay (2020) <doi:10.2139/ssrn.3096534>. The model allows for unobserved heterogeneity that is common to all bidders in addition to observable heterogeneity.

r-aftables 1.0.2
Propagated dependencies: r-pillar@1.10.2 r-openxlsx@4.2.8
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://best-practice-and-impact.github.io/aftables/
Licenses: Expat
Synopsis: Create Spreadsheet Publications Following Best Practice
Description:

Generate spreadsheet publications that follow best practice guidance from the UK government's Analysis Function, available at <https://analysisfunction.civilservice.gov.uk/policy-store/releasing-statistics-in-spreadsheets/>, with a focus on accessibility. See also the Python package gptables'.

r-adapt4pv 0.2-3
Propagated dependencies: r-xgboost@1.7.11.1 r-speedglm@0.3-5 r-matrix@1.7-3 r-glmnet@4.1-8 r-foreach@1.5.2 r-doparallel@1.0.17
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=adapt4pv
Licenses: GPL 2
Synopsis: Adaptive Approaches for Signal Detection in Pharmacovigilance
Description:

This package provides a collection of several pharmacovigilance signal detection methods based on adaptive lasso. Additional lasso-based and propensity score-based signal detection approaches are also supplied. See Courtois et al <doi:10.1186/s12874-021-01450-3>.

r-bssbinom 1.0.0
Propagated dependencies: r-teachingdemos@2.13 r-pscl@1.5.9
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bssbinom
Licenses: Expat
Synopsis: Bayesian Sample Size for Binomial Proportions
Description:

Computation of the minimum sample size using the Average Coverage Criterion or the Average Length Criterion for estimating binomial proportions using beta prior distributions. For more details see Costa (2025) <DOI:10.1007/978-3-031-72215-8_14>.

r-creditas 0.3.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/ropensci/CRediTas/
Licenses: Expat
Synopsis: Generate CRediT Author Statements
Description:

This package provides a tiny package to generate CRediT author statements (<https://credit.niso.org/>). It provides three functions: create a template, read it back and generate the CRediT author statement in a text file.

r-dfexpand 0.0.2
Propagated dependencies: r-stringr@1.5.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/jlpainter/dfexpand
Licenses: GPL 3+
Synopsis: Automatically Expand Delimited Column Values into Multiple Binary Columns with 'dfexpand'
Description:

This package implements an algorithm to effortlessly split a column in an R data frame filled with multiple values separated by delimiters. This automates the process of creating separate columns for each unique value, transforming them into binary outcomes.

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