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r-tsetools 1.0.0
Propagated dependencies: r-xts@0.14.1 r-rjson@0.2.23 r-quantmod@0.4.28 r-quadprog@1.5-8 r-httr@1.4.7
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TSEtools
Licenses: FreeBSD
Build system: r
Synopsis: Manage Data from the Finance Markets
Description:

This package provides a set of tools designed to perform descriptive data analysis on assets, manage asset portfolios and capital allocation, and download, organize, and maintain data from the "Tehran Stock Exchange" and "NOBITEX" platforms.

r-valuemap 2.0.4
Propagated dependencies: r-sf@1.0-23 r-leaflet@2.2.3 r-htmltools@0.5.8.1 r-h3jsr@1.3.1 r-dplyr@1.1.4 r-devtools@2.4.6
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/Curycu/valuemap
Licenses: GPL 3+
Build system: r
Synopsis: Making Choropleth Map
Description:

You can easily visualize your sf polygons or data.frame with h3 address. While leaflet package is too raw for data analysis, this package can save data analysts efforts & time with pre-set visualize options.

r-shiny-gn 1.11.1
Dependencies: js-datatables@1.10.19 js-selectize@0.12.6 js-strftime@0.10.0 js-highlight@9.12.0
Propagated dependencies: r-bslib@0.9.0 r-cachem@1.1.0 r-commonmark@2.0.0 r-crayon@1.5.3 r-ellipsis@0.3.2 r-fastmap@1.2.0 r-fontawesome@0.5.3 r-glue@1.8.0 r-htmltools@0.5.8.1 r-httpuv@1.6.16 r-jsonlite@2.0.0 r-later@1.4.4 r-lifecycle@1.0.4 r-mime@0.13 r-promises@1.5.0 r-r6@2.6.1 r-rlang@1.1.6 r-sourcetools@0.1.7-1 r-withr@3.0.2 r-xtable@1.8-4
Channel: gn-bioinformatics
Location: gn/packages/r-shiny.scm (gn packages r-shiny)
Home page: https://shiny.rstudio.com
Licenses: Artistic License 2.0
Build system: r
Synopsis: Easy interactive web applications with R
Description:

Makes it incredibly easy to build interactive web applications with R. Automatic "reactive" binding between inputs and outputs and extensive prebuilt widgets make it possible to build beautiful, responsive, and powerful applications with minimal effort.

r-maftools 2.26.0
Propagated dependencies: r-data-table@1.17.8 r-dnacopy@1.84.0 r-pheatmap@1.0.13 r-rcolorbrewer@1.1-3 r-rhtslib@3.6.0 r-survival@3.8-3
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://github.com/PoisonAlien/maftools
Licenses: Expat
Build system: r
Synopsis: Summarize, analyze and visualize MAF files
Description:

Analyze and visualize Mutation Annotation Format (MAF) files from large scale sequencing studies. This package provides various functions to perform most commonly used analyses in cancer genomics and to create feature rich customizable visualzations with minimal effort.

r-siggenes 1.84.0
Propagated dependencies: r-biobase@2.70.0 r-multtest@2.66.0 r-scrime@1.3.5
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/siggenes/
Licenses: LGPL 2.0+
Build system: r
Synopsis: Multiple testing using SAM and Efron's empirical Bayes approaches
Description:

This package provides tools for the identification of differentially expressed genes and estimation of the False Discovery Rate (FDR) using both the Significance Analysis of Microarrays (SAM) and the Empirical Bayes Analyses of Microarrays (EBAM).

r-gitcreds 0.1.2
Dependencies: git-minimal@2.50.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/r-lib/gitcreds
Licenses: Expat
Build system: r
Synopsis: Query git credentials from R
Description:

Query, set, and delete credentials from the git credential store. Manage GitHub tokens and other git credentials. This package is to be used by other packages that need to authenticate to GitHub and/or other git repositories.

r-ahensdbs 1.7.0
Propagated dependencies: r-ensembldb@2.34.0 r-annotationhubdata@1.40.0
Channel: guix-bioc
Location: guix-bioc/packages/a.scm (guix-bioc packages a)
Home page: https://bioconductor.org/packages/AHEnsDbs
Licenses: Artistic License 2.0
Build system: r
Synopsis: EnsDbs for AnnotationHub
Description:

Supplies AnnotationHub with EnsDb Ensembl-based annotation databases for all species. EnsDb SQLite databases are generated separately from Ensembl MySQL databases using functions from the ensembldb package employing the Ensembl Perl API.

r-brgedata 1.32.0
Propagated dependencies: r-summarizedexperiment@1.40.0 r-biobase@2.70.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/brgedata
Licenses: Expat
Build system: r
Synopsis: Exposures, Gene Expression and Methylation data for ilustration purpouses
Description:

This package contains several sets of omics data including Gene Expression (ExpressionSet), Methylation (GenomicRatioSet), Proteome and Exposome (ExposomeSet). This data is used in vignettes and exaples at MEAL, MultiDataSet and omicRexposome.

r-cn-farms 1.58.0
Propagated dependencies: r-snow@0.4-4 r-preprocesscore@1.72.0 r-oligoclasses@1.72.0 r-oligo@1.74.0 r-lattice@0.22-7 r-ff@4.5.2 r-dnacopy@1.84.0 r-dbi@1.2.3 r-biobase@2.70.0 r-affxparser@1.82.0
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: http://www.bioinf.jku.at/software/cnfarms/cnfarms.html
Licenses: LGPL 2.0+
Build system: r
Synopsis: cn.FARMS - factor analysis for copy number estimation
Description:

This package implements the cn.FARMS algorithm for copy number variation (CNV) analysis. cn.FARMS allows to analyze the most common Affymetrix (250K-SNP6.0) array types, supports high-performance computing using snow and ff.

r-brassica 1.0.2
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=brassica
Licenses: GPL 3
Build system: r
Synopsis: 1970s BASIC Interpreter
Description:

Executes BASIC programs from the 1970s, for historical and educational purposes. This enables famous examples of early machine learning, artificial intelligence, natural language processing, cellular automata, and so on, to be run in their original form.

r-cycloids 1.0.2
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=cycloids
Licenses: GPL 3
Build system: r
Synopsis: Tools for Calculating Hypocycloids, Epicycloids, Hypotrochoids, and Epitrochoids
Description:

This package provides tools for calculating coordinate representations of hypocycloids, epicyloids, hypotrochoids, and epitrochoids (altogether called cycloids here) with different scaling and positioning options. The cycloids can be visualised with any appropriate graphics function in R.

r-dizutils 0.1.3
Propagated dependencies: r-xml2@1.5.0 r-rpresto@1.4.7 r-rpostgres@1.4.8 r-rjsonio@2.0.0 r-rjdbc@0.2-10 r-psych@2.5.6 r-httr@1.4.7 r-hmisc@5.2-4 r-diztools@1.0.3 r-dbi@1.2.3 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/miracum/misc-dizutils
Licenses: GPL 3
Build system: r
Synopsis: Utilities for 'DIZ' R Package Development
Description:

Utility functions used for the R package development infrastructure inside the data integration centers ('DIZ') to standardize and facilitate repetitive tasks such as setting up a database connection or issuing notification messages and to avoid redundancy.

r-dfoliatr 0.3.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-rlang@1.1.6 r-purrr@1.2.0 r-magrittr@2.0.4 r-glue@1.8.0 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-forcats@1.0.1 r-dplyr@1.1.4 r-dplr@1.7.8
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://chguiterman.github.io/dfoliatR/
Licenses: GPL 3+
Build system: r
Synopsis: Detection and Analysis of Insect Defoliation Signals in Tree Rings
Description:

This package provides tools to identify, quantify, analyze, and visualize growth suppression events in tree rings that are often produced by insect defoliation. Described in Guiterman et al. (2020) <doi:10.1016/j.dendro.2020.125750>.

r-diconvex 1.0.0
Propagated dependencies: r-lpsolveapi@5.5.2.0-17.14
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DIconvex
Licenses: GPL 2
Build system: r
Synopsis: Finding Patterns of Monotonicity and Convexity in Data
Description:

Given an initial set of points, this package minimizes the number of elements to discard from this set such that there exists at least one monotonic and convex mapping within pre-specified upper and lower bounds.

r-fakemake 1.11.1
Propagated dependencies: r-makefiler@1.1.0 r-igraph@2.2.1 r-fritools@4.5.0
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://gitlab.com/fvafrcu/fakemake
Licenses: FreeBSD
Build system: r
Synopsis: Mock the Unix Make Utility
Description:

Use R as a minimal build system. This might come in handy if you are developing R packages and can not use a proper build system. Stay away if you can (use a proper build system).

r-ggtricks 0.1.0
Propagated dependencies: r-ggplot2@4.0.1 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://github.com/AbdoulMa/ggtricks
Licenses: Expat
Build system: r
Synopsis: Create Sector and Other Charts Easily Using Grammar of Graphics
Description:

This package provides a collection of several geoms to create graphics, using ggplot2 and the Cartesian coordinate system. You use the familiar mapping Grammar of Graphics without the need to do another transformation into polar coordinates.

r-geonames 0.999
Propagated dependencies: r-rjson@0.2.23
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=geonames
Licenses: GPL 3
Build system: r
Synopsis: Interface to the "Geonames" Spatial Query Web Service
Description:

The web service at <https://www.geonames.org/> provides a number of spatial data queries, including administrative area hierarchies, city locations and some country postal code queries. A (free) username is required and rate limits exist.

r-interva5 1.1.3
Propagated dependencies: r-readxl@1.4.5 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=InterVA5
Licenses: GPL 3
Build system: r
Synopsis: Replicate and Analyse 'InterVA5'
Description:

This package provides an R version of the InterVA5 software (<http://www.byass.uk/interva/>) for coding cause of death from verbal autopsies. It also provides simple graphical representation of individual and population level statistics.

r-inctools 1.0.15
Propagated dependencies: r-tmvtnorm@1.7 r-tibble@3.3.0 r-rlang@1.1.6 r-pracma@2.4.6 r-plyr@1.8.9 r-magrittr@2.0.4 r-glm2@1.2.1 r-ggplot2@4.0.1 r-foreach@1.5.2 r-dplyr@1.1.4 r-doparallel@1.0.17 r-cubature@2.1.4-1 r-binom@1.1-1.1
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: http://www.incidence-estimation.org/page/inctools
Licenses: GPL 3
Build system: r
Synopsis: Incidence Estimation Tools
Description:

This package provides tools for estimating incidence from biomarker data in cross- sectional surveys, and for calibrating tests for recent infection. Implements and extends the method of Kassanjee et al. (2012) <doi:10.1097/EDE.0b013e3182576c07>.

r-iperform 0.0.3
Propagated dependencies: r-matrixstats@1.5.0 r-lubridate@1.9.4
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=iperform
Licenses: GPL 3
Build system: r
Synopsis: Time Series Performance
Description:

This package provides a tool to calculate the performance of a time series in a specific date or period. It is more intended for data analysis in the fields of finance, banking, telecommunications or operational marketing.

r-lifepack 0.1.0
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=lifepack
Licenses: GPL 3
Build system: r
Synopsis: Insurance Reserve Calculations
Description:

Calculates insurance reserves and equivalence premiums using advanced numerical methods, including the Runge-Kutta algorithm and product integrals for transition probabilities. This package is useful for actuarial analyses and life insurance modeling, facilitating accurate financial projections.

r-minidown 0.4.0
Propagated dependencies: r-xfun@0.54 r-sass@0.4.10 r-rmarkdown@2.30 r-mime@0.13 r-knitr@1.50 r-katex@1.5.0 r-htmltools@0.5.8.1
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://minidown.atusy.net
Licenses: Expat
Build system: r
Synopsis: Create Simple Yet Powerful HTML Documents with Light Weight CSS Frameworks
Description:

Create minimal, responsive, and style-agnostic HTML documents with the lightweight CSS frameworks such as sakura', Water.css', and spcss'. Powerful features include table of contents floating as a sidebar, folding codes and results, and more.

r-micropop 1.6
Propagated dependencies: r-visnetwork@2.1.4 r-testthat@3.3.0 r-desolve@1.40
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://besjournals.onlinelibrary.wiley.com/doi/full/10.1111/2041-210X.12873
Licenses: GPL 3 FSDG-compatible
Build system: r
Synopsis: Process-Based Modelling of Microbial Populations
Description:

Modelling interacting microbial populations - example applications include human gut microbiota, rumen microbiota and phytoplankton. Solves a system of ordinary differential equations to simulate microbial growth and resource uptake over time. This version contains network visualisation functions.

r-mlbplotr 1.2.0
Propagated dependencies: r-scales@1.4.0 r-rlang@1.1.6 r-magrittr@2.0.4 r-magick@2.9.0 r-lifecycle@1.0.4 r-httr@1.4.7 r-gt@1.3.0 r-ggplot2@4.0.1 r-data-table@1.17.8 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/camdenk/mlbplotR
Licenses: Expat
Build system: r
Synopsis: Create 'ggplot2' and 'gt' Visuals with Major League Baseball Logos
Description:

This package provides tools to help visualize Major League Baseball analysis in ggplot2 and gt'. You provide team/player information and mlbplotR will transform that information into team colors, logos, or player headshots for graphics.

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