This package provides a shiny dashboard and plotting utilities to explore and report VALD ForceDecks testing data. Includes interactive modules for metric exploration, radar charts, longitudinal comparisons, quadrant plots, and athlete reports.

Reading and writing sheets of a single Excel file into and from a list of data frames. Eases I/O of tabular data in bioinformatics while keeping them in a human readable format.

Streamlines the creation of reproducible analytical pipelines using default.nix expressions generated via the rix package for reproducibility. Define derivations in R', Python or Julia', chain them into a composition of pure functions and build the resulting pipeline using Nix as the underlying end-to-end build tool. Functions to plot the pipeline as a directed acyclic graph are included, as well as functions to load and inspect intermediary results for interactive analysis. User experience heavily inspired by the targets package.

Robust mixture discriminant analysis (RMDA), proposed in Bouveyron & Girard, 2009 <doi:10.1016/j.patcog.2009.03.027>, allows to build a robust supervised classifier from learning data with label noise. The idea of the proposed method is to confront an unsupervised modeling of the data with the supervised information carried by the labels of the learning data in order to detect inconsistencies. The method is able afterward to build a robust classifier taking into account the detected inconsistencies into the labels.

This package provides clean, tidy access to key economic indicators published by the Organisation for Economic Co-operation and Development ('OECD'), covering GDP, CPI inflation, unemployment, tax revenue, government deficit, health expenditure, education expenditure, income inequality, labour productivity, and current account balance across all 38 OECD member countries. Data is downloaded from the OECD Data Explorer API <https://data-explorer.oecd.org> on first use and cached locally for subsequent calls. Returns tidy long-format data frames ready for analysis and visualisation.

This package provides several analysis-related functions for the book entitled "R statistics and graph for medical articles" (written in Korean), version 1, by Keon-Woong Moon with Korean demographic data with several plot functions.

This package provides a collection of methods for smoothing numerical data, commencing with a port of the Matlab gaussian window smoothing function. In addition, several functions typically used in smoothing of financial data are included.

Phylogenetic trees generally contain multiple components including nodes, edges, branches and associated data. This package provides an approach to convert tree objects to tidy data frames. It also provides tidy interfaces to manipulate tree data.

This package provides Ruby support for the HOCON configuration file format. It supports parsing and modifying HOCON and JSON files, and rendering parsed objects back to a String.

An upgraded causal reasoning tool from Melas et al in R with updated assignments of TFs weights from PROGENy scores. Optimization parameters can be freely adjusted and multiple solutions can be obtained and aggregated.

This package provides functions for plotting heatmaps of genome-wide data across genomic intervals, such as ChIP-seq signals at peaks or across promoters. Many functions are also provided for investigating sequence features.

Statistical tools for building random mutagenesis libraries for prokaryotes. The package has functions for handling the occupancy distribution for a multinomial and for estimating the number of essential genes in random transposon mutagenesis libraries.

Programmatic interface to the NASA Application for Extracting and Exploring Analysis Ready Samples services (AppEEARS; <https://appeears.earthdatacloud.nasa.gov/>). The package provides easy access to analysis ready earth observation data in R.

This package provides tools for downloading and extracting data from the Copernicus "Agrometeorological indicators from 1979 to present derived from reanalysis" <https://cds.climate.copernicus.eu/datasets/sis-agrometeorological-indicators?tab=overview> (AgERA5).

An interactive document on the topic of binary logistic regression analysis using rmarkdown and shiny packages. Runtime examples are provided in the package function as well as at <https://analyticmodels.shinyapps.io/BinaryLogisticRegressionModelling/>.

This package provides a collection of box-geometry model (BGM) files for the Atlantis ecosystem model. Atlantis is a deterministic, biogeochemical, whole-of-ecosystem model (see <http://atlantis.cmar.csiro.au/> for more information).

Write blog posts and web pages in R Markdown. This package supports the static site generator Hugo (<https://gohugo.io>) best, and it also supports Jekyll (<https://jekyllrb.com>) and Hexo (<https://hexo.io>).

Producing probabilistic projections of net migration rate for all countries of the world or for subnational units using a Bayesian hierarchical model by Azose an Raftery (2015) <doi:10.1007/s13524-015-0415-0>.

Quantifies and assesses the significance of convergent evolution using multiple methods and measures as described in Stayton (2015) <DOI: 10.1111/evo.12729> and Grossnickle et al. 2023. Also displays results in various ways.

This package implements a semi-parametric GEE estimator accounting for missing data with Inverse-probability weighting (IPW) and for imbalance in covariates with augmentation (AUG). The estimator IPW-AUG-GEE is Doubly robust (DR).

This package provides a shiny application that enables the user to create a prototype UI, being able to drag and drop UI components before being able to save or download the equivalent R code.

Statistical deadband algorithms are based on the Send-On-Delta concept as in Miskowicz(2006,<doi:10.3390/s6010049>). A collection of functions compare effectiveness and fidelity of sampled signals using statistical deadband algorithms.

Data that are collected through online sources such as Mechanical Turk may require excluding rows because of IP address duplication, geolocation, or completion duration. This package facilitates exclusion of these data for Qualtrics datasets.

This package provides functions and data sets to perform and demonstrate community ecology statistical tests, including Hutcheson's t-test (Hutcheson (1970) <doi:10.1016/0022-5193(70)90124-4>, Zar (2010) ISBN:9780321656865).