This package implements S4 classes for probability models based on packages distr and distrEx'.

This package provides a set of tools to generate dynamic spectrogram visualizations in video format.

Helpers for parsing out the R functions and packages used in R scripts and notebooks.

Computes factorial A-, D- and E-optimal designs for two-colour cDNA microarray experiments.

This package performs Gamma regression, where both mean and shape parameters follows lineal regression structures.

Most importantly, calculates Kullback-Leibler Divergence (KLD), Turing's perspective estimator and their confidence intervals.

This package provides a collection of functions for computations and visualizations of microbial pan-genomes.

Designed to add datasets which are used in the Nonparametric Statistical Methods textbook, 3rd edition.

Retrieves a pluscode by inputting latitude and longitude. Includes additional functions to retrieve neighbouring pluscodes'.

This package creates 3D animated, interactive visualizations that can be viewed in a web browser.

Interface to interact with the modelling framework SIMPLACE and to parse the results of simulations.

Starting from a Regression Model, it provides a stepwise procedure to select the linear predictor.

This package provides a collection of true type and open type Star Trek-themed fonts.

This package provides fitting routines for four versions of the Vitality family of mortality models.

Calculates voter transitions comparing two elections, using the function solve.QP() in package quadprog'.

Adds ... to a function's argument list so that it can tolerate non-matching arguments.

RetroShare is a Free and Open Source cross-platform, Friend-2-Friend and secure decentralised communication platform.

Custom script for Rofi that allows you to copy or fill passwords from your Lastpass vault.

This package estimates previously compiled regression models using the rstan package, which provides the R interface to the Stan C++ library for Bayesian estimation. Users specify models via the customary R syntax with a formula and data.frame plus some additional arguments for priors.

This package performs differential pattern analysis for Ribo-seq data. It identifies genes with significantly different patterns in the ribosome footprint between two conditions. RiboDiPA contains five major components including bam file processing, P-site mapping, data binning, differential pattern analysis and footprint visualization.

Retrieve, map and summarize data from the VertNet.org archives (<https://vertnet.org/>). Functions allow searching by many parameters, including taxonomic names, places, and dates. In addition, there is an interface for conducting spatially delimited searches, and another for requesting large datasets via email.

This package provides a novel numerical algorithm that provides functionality for estimating the exact 95% confidence interval of the location parameter in the random effects model, and is much faster than the naive method. Works best when the number of studies is between 6-20.

Perform wavelet analysis (orthogonal,translation invariant, tensorial, 1-2-3d transforms, thresholding, block thresholding, linear,...) with applications to data compression, denoising/regression or clustering. The core of the code is a port of MATLAB Wavelab toolbox written by D. Donoho, A. Maleki and M. Shahram.

R^2 measure of explained variation under the semiparametric additive hazards model is estimated. The measure can be used as a measure of predictive capability and therefore it can be adopted in model selection process. Rava, D. and Xu, R. (2020) <arXiv:2003.09460>.