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   / / /  \/_// / /   / / / \ \ \        \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
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python-rns 0.9.4
Propagated dependencies: python-cryptography@44.0.0 python-pyserial@3.5
Channel: lauras-channel
Location: laura/packages/nomadnet.scm (laura packages nomadnet)
Home page: https://reticulum.network/
Licenses: Expat
Build system: pyproject
Synopsis: Self-configuring, encrypted and resilient mesh networking stack for LoRa, packet radio, WiFi and everything in between
Description:

Self-configuring, encrypted and resilient mesh networking stack for LoRa, packet radio, WiFi and everything in between.

r-rflomics 1.4.2
Dependencies: python-scikit-learn@1.7.2 python-scipy@1.16.3 python@3.12.12 python-pandas@2.3.3 python-numpy@2.3.1 python-h5py@3.15.1 argparse@1.1.0
Propagated dependencies: r-vroom@1.7.1 r-upsetr@1.4.0 r-tidyselect@1.2.1 r-tidyr@1.3.2 r-tibble@3.3.1 r-summarizedexperiment@1.42.0 r-stringr@1.6.0 r-shinywidgets@0.9.1 r-shinydashboard@0.7.3 r-shinybs@0.65.0 r-shiny@1.13.0 r-s4vectors@0.50.1 r-rmarkdown@2.31 r-reticulate@1.46.0 r-reshape2@1.4.5 r-rcolorbrewer@1.1-3 r-purrr@1.2.2 r-plotly@4.12.0 r-org-at-tair-db@3.22.0 r-multiassayexperiment@1.38.0 r-mofa2@1.22.1 r-mixomics@6.36.0 r-magrittr@2.0.5 r-limma@3.68.3 r-knitr@1.51 r-httr@1.4.8 r-htmltools@0.5.9 r-ggrepel@0.9.8 r-ggpubr@0.6.3 r-ggplot2@4.0.3 r-ggnetwork@0.5.14 r-factominer@2.14 r-edger@4.10.0 r-dt@0.34.0 r-dplyr@1.2.1 r-data-table@1.18.4 r-coseq@1.36.0 r-complexheatmap@2.28.0 r-clusterprofiler@4.20.0 r-annotationdbi@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/r.scm (guix-bioc packages r)
Home page: https://github.com/RFLOMICS/RFLOMICS
Licenses: Artistic License 2.0
Build system: r
Synopsis: Interactive web application for Omics-data analysis
Description:

R-package with shiny interface, provides a framework for the analysis of transcriptomics, proteomics and/or metabolomics data. The interface offers a guided experience for the user, from the definition of the experimental design to the integration of several omics table together. A report can be generated with all settings and analysis results.

r-rcorpora 2.0.1
Propagated dependencies: r-jsonlite@2.0.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/gaborcsardi/rcorpora
Licenses: CC0
Build system: r
Synopsis: Collection of Small Text Corpora of Interesting Data
Description:

This package provides a collection of small text corpora of interesting data. It contains all data sets from dariusk/corpora'. Some examples: names of animals: birds, dinosaurs, dogs; foods: beer categories, pizza toppings; geography: English towns, rivers, oceans; humans: authors, US presidents, occupations; science: elements, planets; words: adjectives, verbs, proverbs, US president quotes.

r-reemtree 0.90.6
Propagated dependencies: r-rpart@4.1.27 r-nlme@3.1-169 r-aer@1.2-16
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: http://pages.stern.nyu.edu/~jsimonof/REEMtree/
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Regression Trees with Random Effects for Longitudinal (Panel) Data
Description:

This package provides a data mining approach for longitudinal and clustered data, which combines the structure of mixed effects model with tree-based estimation methods. See Sela, R.J. and Simonoff, J.S. (2012) RE-EM trees: a data mining approach for longitudinal and clustered data <doi:10.1007/s10994-011-5258-3>.

r-roptions 1.0.3
Propagated dependencies: r-purrr@1.2.2 r-plotly@4.12.0 r-ggplot2@4.0.3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=roptions
Licenses: GPL 3
Build system: r
Synopsis: Option Strategies and Valuation
Description:

Collection of tools to develop options strategies, value option contracts using the Black-Scholes-Merten option pricing model and calculate the option Greeks. Hull, John C. "Options, Futures, and Other Derivatives" (1997, ISBN:0-13-601589-1). Fischer Black, Myron Scholes (1973) "The Pricing of Options and Corporate Liabilities" <doi:10.1086/260062>.

r-roxyreqs 1.3.0
Propagated dependencies: r-withr@3.0.2 r-testthat@3.3.2 r-stringr@1.6.0 r-roxygen2@8.0.0 r-rlang@1.2.0 r-r6@2.6.1 r-cli@3.6.6 r-brio@1.1.5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/mnlang/roxyreqs
Licenses: GPL 3+
Build system: r
Synopsis: 'roxygen2'-Style Metadata for Test Cases and Function Documentation
Description:

Extends roxygen2 to support @meta tags for documenting testthat test cases and function specifications. Includes a custom JUnit reporter that exports test metadata as XML properties and validation functions to ensure all exported functions and tests contain required tags. Designed for traceability between requirements and tests in regulated industries such as pharma and finance.

r-rdhonest 1.0.2
Propagated dependencies: r-withr@3.0.2 r-formula@1.2-5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/kolesarm/RDHonest
Licenses: GPL 3
Build system: r
Synopsis: Honest Inference in Regression Discontinuity Designs
Description:

Honest and nearly-optimal confidence intervals in fuzzy and sharp regression discontinuity designs and for inference at a point based on local linear regression. The implementation is based on Armstrong and Kolesár (2018) <doi:10.3982/ECTA14434>, and Kolesár and Rothe (2018) <doi:10.1257/aer.20160945>. Supports covariates, clustering, and weighting.

r-phyloseq 1.56.0
Propagated dependencies: r-ade4@1.7-24 r-ape@5.8-1 r-biobase@2.72.0 r-biocgenerics@0.58.1 r-biomformat@1.40.0 r-biostrings@2.80.1 r-cluster@2.1.8.2 r-data-table@1.18.4 r-foreach@1.5.2 r-ggplot2@4.0.3 r-igraph@2.3.1 r-multtest@2.68.0 r-plyr@1.8.9 r-reshape2@1.4.5 r-scales@1.4.0 r-vegan@2.7-3
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://github.com/joey711/phyloseq
Licenses: AGPL 3
Build system: r
Synopsis: Handling and analysis of high-throughput microbiome census data
Description:

Phyloseq provides a set of classes and tools to facilitate the import, storage, analysis, and graphical display of microbiome census data.

r-sysfonts 0.8.9
Dependencies: freetype@2.13.3 libpng@1.6.39 zlib@1.3.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/yixuan/sysfonts
Licenses: GPL 2
Build system: r
Synopsis: Loading fonts into R
Description:

This is a package to simplify loading of system fonts and Google Fonts into R, in order to support other packages.

r-quantmod 0.4.28
Propagated dependencies: r-curl@7.1.0 r-jsonlite@2.0.0 r-ttr@0.24.4 r-xts@0.14.2 r-zoo@1.8-15
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/quantmod/
Licenses: GPL 3
Build system: r
Synopsis: Quantitative financial modelling framework
Description:

This package provides a quantitative financial modelling framework to allow users to specify, build, trade, and analyse quantitative financial trading strategies.

r-depmixs4 1.5-1
Propagated dependencies: r-mass@7.3-65 r-nlme@3.1-169 r-nnet@7.3-20 r-rsolnp@2.0.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/depmixS4/
Licenses: GPL 2+
Build system: r
Synopsis: Dependent Mixture Models
Description:

This package fits latent (hidden) Markov models on mixed categorical and continuous (time series) data, otherwise known as dependent mixture models.

r-circular 0.5-2
Propagated dependencies: r-boot@1.3-32 r-mvtnorm@1.3-7
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/circular/
Licenses: GPL 2+
Build system: r
Synopsis: Circular statistics
Description:

This package provides tools for circular statistics, from "Topics in circular Statistics" (2001) S. Rao Jammalamadaka and A. SenGupta, World Scientific.

r-mathjaxr 2.0-0
Dependencies: js-mathjax@4.0.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/wviechtb/mathjaxr
Licenses: ASL 2.0 GPL 3
Build system: r
Synopsis: Use Mathjax in Rd Files
Description:

This package provides MathJax and macros to enable its use within Rd files for rendering equations in the HTML help files.

r-abcdefba 0.4
Propagated dependencies: r-corrplot@0.95 r-lattice@0.22-9 r-rgl@1.3.36 r-rglpk@0.6-5.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/abcdeFBA/
Licenses: GPL 2
Build system: r
Synopsis: A-Biologist-Can-Do-Everything of Flux Balance Analysis with this package
Description:

This package provides functions for Constraint Based Simulation using Flux Balance Analysis and informative analysis of the data generated during simulation.

ruby-aruba 2.3.3
Propagated dependencies: bundler@2.6.9 ruby-childprocess@5.1.0 ruby-contracts@0.17.2 ruby-cucumber@8.0.0 ruby-rspec-expectations@3.13.3 ruby-thor@1.2.2
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: https://github.com/cucumber/aruba
Licenses: Expat
Build system: ruby
Synopsis: Test command-line applications with Cucumber, RSpec or Minitest
Description:

Aruba is an extension for Cucumber, RSpec and Minitest for testing command-line applications. It supports applications written in any language.

ruby-clamp 1.3.2
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: https://github.com/mdub/clamp
Licenses: Expat
Build system: ruby
Synopsis: Command-line parsing library for Ruby
Description:

Clamp provides an object-model for command-line utilities. It handles parsing of command-line options, and generation of usage help.

r-limmagui 1.88.0
Propagated dependencies: r-xtable@1.8-8 r-tkrplot@0.0-32 r-r2html@2.3.4 r-limma@3.68.3
Channel: guix-bioc
Location: guix-bioc/packages/l.scm (guix-bioc packages l)
Home page: http://bioinf.wehi.edu.au/limmaGUI/
Licenses: FSDG-compatible
Build system: r
Synopsis: GUI for limma Package With Two Color Microarrays
Description:

This package provides a Graphical User Interface for differential expression analysis of two-color microarray data using the limma package.

r-mofadata 1.28.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/MOFAdata
Licenses: LGPL 3
Build system: r
Synopsis: Data package for Multi-Omics Factor Analysis (MOFA)
Description:

This package provides a collection of datasets to accompany the R package MOFA and illustrate running and analysing MOFA models.

r-muscdata 1.26.0
Propagated dependencies: r-singlecellexperiment@1.34.0 r-experimenthub@3.2.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://github.com/HelenaLC/muscData
Licenses: Expat
Build system: r
Synopsis: Multi-sample multi-group scRNA-seq data
Description:

Data package containing a collection of multi-sample multi-group scRNA-seq datasets in SingleCellExperiment Bioconductor object format.

r-normqpcr 1.58.0
Propagated dependencies: r-readqpcr@1.58.0 r-rcolorbrewer@1.1-3 r-qpcr@1.4-2 r-biobase@2.72.0
Channel: guix-bioc
Location: guix-bioc/packages/n.scm (guix-bioc packages n)
Home page: www.bioconductor.org/packages/release/bioc/html/NormqPCR.html
Licenses: LGPL 3
Build system: r
Synopsis: Functions for normalisation of RT-qPCR data
Description:

This package provides functions for the selection of optimal reference genes and the normalisation of real-time quantitative PCR data.

r-spqndata 1.24.0
Propagated dependencies: r-summarizedexperiment@1.42.0
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: https://bioconductor.org/packages/spqnData
Licenses: Artistic License 2.0
Build system: r
Synopsis: Data for the spqn package
Description:

Bulk RNA-seq from GTEx on 4,000 randomly selected, expressed genes. Data has been processed for co-expression analysis.

r-autocogs 0.1.5
Propagated dependencies: r-tibble@3.3.1 r-progress@1.2.3 r-moments@0.14.1 r-mclust@6.1.2 r-mass@7.3-65 r-hexbin@1.28.5 r-ggplot2@4.0.3 r-dplyr@1.2.1 r-diptest@0.77-2 r-checkmate@2.3.4 r-broom@1.0.13
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/schloerke/autocogs
Licenses: Expat
Build system: r
Synopsis: Automatic Cognostic Summaries
Description:

Automatically calculates cognostic groups for plot objects and list column plot objects. Results are returned in a nested data frame.

r-bingadsr 0.1.0
Propagated dependencies: r-jsonlite@2.0.0
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://windsor.ai/
Licenses: GPL 3
Build system: r
Synopsis: Get Bing Ads Data via the 'Windsor.ai' API
Description:

Collect your data on digital marketing campaigns from bing Ads using the Windsor.ai API <https://windsor.ai/api-fields/>.

r-estatapi 0.4.0
Propagated dependencies: r-tibble@3.3.1 r-rlang@1.2.0 r-readr@2.2.0 r-purrr@1.2.2 r-httr@1.4.8 r-dplyr@1.2.1
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://yutannihilation.github.io/estatapi/
Licenses: Expat
Build system: r
Synopsis: R Interface to e-Stat API
Description:

This package provides an interface to e-Stat API, the one-stop service for official statistics of the Japanese government.

Total packages: 32844