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    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/
r-octopusr 1.0.1
Propagated dependencies: r-tibble@3.3.0 r-rlang@1.1.6 r-httr2@1.2.1 r-glue@1.8.0 r-cli@3.6.5 r-askpass@1.2.1
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://github.com/Moohan/octopusR
Licenses: Expat
Build system: r
Synopsis: Interact with the 'Octopus Energy' API
Description:

This package provides a simple wrapper for the Octopus Energy API <https://developer.octopus.energy/docs/api/>. It handles authentication, by storing a provided API key and meter details. Implemented endpoints include products for viewing tariff details and consumption for viewing meter consumption data.

r-pastclim 2.2.0
Propagated dependencies: r-xml2@1.5.0 r-terra@1.8-86 r-sf@1.0-23 r-ncdf4@1.24 r-lubridate@1.9.4 r-gstat@2.1-4 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/EvolEcolGroup/pastclim
Licenses: FSDG-compatible
Build system: r
Synopsis: Manipulate Time Series of Climate Reconstructions
Description:

This package provides methods to easily extract and manipulate climate reconstructions for ecological and anthropological analyses, as described in Leonardi et al. (2023) <doi:10.1111/ecog.06481>. The package includes datasets of palaeoclimate reconstructions, present observations, and future projections from multiple climate models.

r-pcensmix 1.2-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pcensmix
Licenses: GPL 2+
Build system: r
Synopsis: Model Fitting to Progressively Censored Mixture Data
Description:

This package provides functions for generating progressively Type-II censored data in a mixture structure and fitting models using a constrained EM algorithm. It can also create a progressive Type-II censored version of a given real dataset to be considered for model fitting.

r-pmparser 1.0.25
Dependencies: unzip@6.0 sqlite@3.39.3
Propagated dependencies: r-xml2@1.5.0 r-withr@3.0.2 r-rcurl@1.98-1.17 r-r-utils@2.13.0 r-jsonlite@2.0.0 r-iterators@1.0.14 r-glue@1.8.0 r-foreach@1.5.2 r-dbi@1.2.3 r-data-table@1.17.8 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://pmparser.hugheylab.org
Licenses: GPL 2
Build system: r
Synopsis: Create and Maintain a Relational Database of Data from PubMed/MEDLINE
Description:

This package provides a simple interface for extracting various elements from the publicly available PubMed XML files, incorporating PubMed's regular updates, and combining the data with the NIH Open Citation Collection. See Schoenbachler and Hughey (2021) <doi:10.7717/peerj.11071>.

r-paleodiv 0.4.6
Propagated dependencies: r-stringr@1.6.0 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=paleoDiv
Licenses: GPL 3+
Build system: r
Synopsis: Extracting and Visualizing Paleobiodiversity
Description:

This package contains various tools for conveniently downloading and editing taxon-specific datasets from the Paleobiology Database <https://paleobiodb.org>, extracting information on abundance, temporal distribution of subtaxa and taxonomic diversity through deep time, and visualizing these data in relation to phylogeny and stratigraphy.

r-quarrint 1.0.0
Propagated dependencies: r-neuralnet@1.44.2
Channel: guix-cran
Location: guix-cran/packages/q.scm (guix-cran packages q)
Home page: https://github.com/jojo-/quarrint
Licenses: GPL 2
Build system: r
Synopsis: Interaction Prediction Between Groundwater and Quarry Extension Using Discrete Choice Models and Artificial Neural Networks
Description:

An implementation of two interaction indices between extractive activity and groundwater resources based on hazard and vulnerability parameters used in the assessment of natural hazards. One index is based on a discrete choice model and the other is relying on an artificial neural network.

r-simtablr 1.2.0
Propagated dependencies: r-tidyr@1.3.1 r-sandwich@3.1-1 r-openxlsx@4.2.8.1 r-lmtest@0.9-40 r-flextable@0.9.10 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/MatheusTG-14/SimtablR
Licenses: Expat
Build system: r
Synopsis: Easy Publication-Ready Tables and Regression Analysis
Description:

Streamlines the creation of descriptive frequency tables ('Table 1'), diagnostic test accuracy evaluations (sensitivity, specificity, predictive values), and multi-outcome regression summaries. Features automatic tables, prevalence and odds ratio calculations, and seamless integration with flextable for exporting results to Microsoft Word and PowerPoint'.

r-rmmquant 1.28.0
Dependencies: zlib@1.3.1
Propagated dependencies: r-txdb-mmusculus-ucsc-mm9-knowngene@3.2.2 r-tbx20bamsubset@1.46.0 r-summarizedexperiment@1.40.0 r-s4vectors@0.48.0 r-rcpp@1.1.0 r-org-mm-eg-db@3.22.0 r-genomicranges@1.62.0 r-devtools@2.4.6 r-deseq2@1.50.2 r-biocstyle@2.38.0 r-apeglm@1.32.0
Channel: guix-bioc
Location: guix-bioc/packages/r.scm (guix-bioc packages r)
Home page: https://bioconductor.org/packages/Rmmquant
Licenses: GPL 3
Build system: r
Synopsis: RNA-Seq multi-mapping Reads Quantification Tool
Description:

RNA-Seq is currently used routinely, and it provides accurate information on gene transcription. However, the method cannot accurately estimate duplicated genes expression. Several strategies have been previously used, but all of them provide biased results. With Rmmquant, if a read maps at different positions, the tool detects that the corresponding genes are duplicated; it merges the genes and creates a merged gene. The counts of ambiguous reads is then based on the input genes and the merged genes. Rmmquant is a drop-in replacement of the widely used tools findOverlaps and featureCounts that handles multi-mapping reads in an unabiased way.

rust-mcfly 0.9.2
Channel: glue
Location: glue/packages/mcfly.scm (glue packages mcfly)
Home page: https://github.com/cantino/mcfly
Licenses: Expat
Build system:
Synopsis: McFly replaces your default ctrl-r shell history search with an intelligent search engine that takes into account your working directory and the context of recently executed commands. McFly's suggestions are prioritized in real time with a small neural network
Description:

This package provides McFly replaces your default ctrl-r shell history search with an intelligent search engine that takes into account your working directory and the context of recently executed commands. McFly's suggestions are prioritized in real time with a small neural network.

ruby-psych 3.3.0
Channel: gn-bioinformatics
Location: gn/packages/ruby.scm (gn packages ruby)
Home page: https://github.com/ruby/psych
Licenses: Expat
Build system: ruby
Synopsis: Psych is a YAML parser and emitter. Psych leverages libyaml[https://pyyaml.org/wiki/LibYAML] for its YAML parsing and emitting capabilities. In addition to wrapping libyaml, Psych also knows how to serialize and de-serialize most Ruby objects to and from the YAML format.
Description:

Psych is a YAML parser and emitter. Psych leverages libyaml[https://pyyaml.org/wiki/LibYAML] for its YAML parsing and emitting capabilities. In addition to wrapping libyaml, Psych also knows how to serialize and de-serialize most Ruby objects to and from the YAML format.

r-progress 1.2.3
Propagated dependencies: r-crayon@1.5.3 r-hms@1.1.4 r-prettyunits@1.2.0 r-r6@2.6.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/gaborcsardi/progress
Licenses: Expat
Build system: r
Synopsis: Terminal progress bars
Description:

This package provides configurable progress bars. They may include percentage, elapsed time, and/or the estimated completion time. They work in terminals, in Emacs ESS, RStudio, Windows Rgui, and the macOS R.app. The package also provides a C++ API, that works with or without Rcpp.

r-uchardet 1.1.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://artemklevtsov.gitlab.io/uchardet
Licenses: GPL 2
Build system: r
Synopsis: Universal character encoding detector
Description:

This package provides R bindings to the uchardet encoding detector library from Mozilla. It takes a sequence of bytes in an unknown character encoding without any additional information, and attempts to get the encoding of the text. All return names of the encodings are iconv-compatible.

r-evaluate 1.0.5
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/hadley/evaluate
Licenses: GPL 3+
Build system: r
Synopsis: Parsing and evaluation tools for R
Description:

This package provides tools that allow you to recreate the parsing, evaluation and display of R code, with enough information that you can accurately recreate what happens at the command line. The tools can easily be adapted for other output formats, such as HTML or LaTeX.

r-gdrutils 1.8.0
Propagated dependencies: r-summarizedexperiment@1.40.0 r-stringr@1.6.0 r-s4vectors@0.48.0 r-qs@0.27.3 r-multiassayexperiment@1.36.1 r-jsonvalidate@1.5.0 r-jsonlite@2.0.0 r-drc@3.0-1 r-digest@0.6.39 r-data-table@1.17.8 r-checkmate@2.3.3 r-bumpymatrix@1.18.0 r-biocparallel@1.44.0
Channel: guix-bioc
Location: guix-bioc/packages/g.scm (guix-bioc packages g)
Home page: https://github.com/gdrplatform/gDRutils
Licenses: Artistic License 2.0
Build system: r
Synopsis: package with helper functions for processing drug response data
Description:

This package contains utility functions used throughout the gDR platform to fit data, manipulate data, and convert and validate data structures. This package also has the necessary default constants for gDR platform. Many of the functions are utilized by the gDRcore package.

r-abglasso 0.1.1
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=abglasso
Licenses: GPL 3
Build system: r
Synopsis: Adaptive Bayesian Graphical Lasso
Description:

This package implements a Bayesian adaptive graphical lasso data-augmented block Gibbs sampler. The sampler simulates the posterior distribution of precision matrices of a Gaussian Graphical Model. This sampler was adapted from the original MATLAB routine proposed in Wang (2012) <doi:10.1214/12-BA729>.

r-bayestfr 7.4-4
Propagated dependencies: r-wpp2019@1.1-1 r-mvtnorm@1.3-3 r-mass@7.3-65 r-lifecycle@1.0.4 r-data-table@1.17.8 r-coda@0.19-4.1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://bayespop.csss.washington.edu
Licenses: GPL 3 FSDG-compatible
Build system: r
Synopsis: Bayesian Fertility Projection
Description:

Making probabilistic projections of total fertility rate for all countries of the world, using a Bayesian hierarchical model <doi:10.1007/s13524-011-0040-5> <doi:10.18637/jss.v106.i08>. Subnational probabilistic projections are also supported <doi:10.4054/DemRes.2018.38.60>.

r-conjurer 1.7.1
Propagated dependencies: r-jsonlite@2.0.0 r-httr@1.4.7
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://www.foyi.co.nz/posts/documentation/documentationconjurer/
Licenses: Expat
Build system: r
Synopsis: Parametric Method for Generating Synthetic Data
Description:

Generates synthetic data distributions to enable testing various modelling techniques in ways that real data does not allow. Noise can be added in a controlled manner such that the data seems real. This methodology is generic and therefore benefits both the academic and industrial research.

r-clarifai 0.4.2
Propagated dependencies: r-jsonlite@2.0.0 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: http://github.com/soodoku/clarifai
Licenses: Expat
Build system: r
Synopsis: Access to Clarifai API
Description:

Get description of images from Clarifai API. For more information, see <http://clarifai.com>. Clarifai uses a large deep learning cloud to come up with descriptive labels of the things in an image. It also provides how confident it is about each of the labels.

r-cctensor 1.0.3
Propagated dependencies: r-rtensor@1.5.0 r-mass@7.3-65 r-igraph@2.2.1 r-fields@17.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/rikenbit/ccTensor
Licenses: Expat
Build system: r
Synopsis: CUR/CX Tensor Decomposition
Description:

CUR/CX decomposition factorizes a matrix into two factor matrices and Multidimensional CX Decomposition factorizes a tensor into a core tensor and some factor matrices. See the reference section of GitHub README.md <https://github.com/rikenbit/ccTensor>, for details of the methods.

r-childsds 0.9.11
Propagated dependencies: r-vgam@1.1-13 r-tidyselect@1.2.1 r-tidyr@1.3.1 r-tibble@3.3.0 r-scales@1.4.0 r-rlang@1.1.6 r-reshape2@1.4.5 r-purrrlyr@0.0.10 r-purrr@1.2.0 r-magrittr@2.0.4 r-lubridate@1.9.4 r-interp@1.1-6 r-ggplot2@4.0.1 r-gamlss-dist@6.1-1 r-gamlss@5.5-0 r-dplyr@1.1.4 r-desctools@0.99.60 r-colorspace@2.1-2 r-class@7.3-23 r-boot@1.3-32
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=childsds
Licenses: GPL 3
Build system: r
Synopsis: Data and Methods Around Reference Values in Pediatrics
Description:

Calculation of standard deviation scores and percentiles adduced from different standards (WHO, UK, Germany, Italy, China, etc). Also, references for laboratory values in children and adults are available, e.g., serum lipids, iron-related blood parameters, IGF, liver enzymes. See package documentation for full list.

r-credsubs 1.1.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=credsubs
Licenses: GPL 3
Build system: r
Synopsis: Credible Subsets
Description:

This package provides functions for constructing simultaneous credible bands and identifying subsets via the "credible subsets" (also called "credible subgroups") method. Package documentation includes the vignette included in this package, and the paper by Schnell, Fiecas, and Carlin (2020, <doi:10.18637/jss.v094.i07>).

r-datadiff 0.4.4
Propagated dependencies: r-yaml@2.3.10 r-tidyselect@1.2.1 r-rlang@1.1.6 r-pointblank@0.12.3 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/ThinkR-open/datadiff
Licenses: Expat
Build system: r
Synopsis: Data Validation Based on YAML Rules
Description:

This package provides a comprehensive data validation package that allows comparing datasets using configurable validation rules defined in YAML files. Built on top of the pointblank package for robust data validation, it supports exact matching, tolerance-based numeric comparisons, text normalization, and row count validation.

r-fastbeta 0.5.1
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://github.com/davidearn/fastbeta
Licenses: GPL 2+
Build system: r
Synopsis: Fast Approximation of Time-Varying Infectious Disease Transmission Rates
Description:

This package provides a fast method for approximating time-varying infectious disease transmission rates from disease incidence time series and other data, based on a discrete time approximation of an SEIR model, as analyzed in Jagan et al. (2020) <doi:10.1371/journal.pcbi.1008124>.

r-foretell 0.2.0
Propagated dependencies: r-nloptr@2.2.1
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=foretell
Licenses: GPL 3
Build system: r
Synopsis: Projecting Customer Retention Based on Fader and Hardie Probability Models
Description:

Project Customer Retention based on Beta Geometric, Beta Discrete Weibull and Latent Class Discrete Weibull Models.This package is based on Fader and Hardie (2007) <doi:10.1002/dir.20074> and Fader and Hardie et al. (2018) <doi:10.1016/j.intmar.2018.01.002>.

Total packages: 31019