Spy is a mocking library. By default, it will raise an error if you attempt to stub a method that doesn't exist or call the stubbed method with the wrong arity.

ruby-unf is a wrapper library to bring Unicode Normalization Form support to both Ruby and JRuby. It uses unf_ext on CRuby and java.text.Normalizer on JRuby.

This package allows to detect and correct for spatial and intensity biases with two-channel microarray data. The normalization method implemented in this package is based on robust neural networks fitting.

RSS Guard is a simple RSS/ATOM feed reader for Windows, Linux, BSD, OS/2 or macOS which can work with RSS/ATOM/JSON/iCalendar/Sitemap feeds as well as many online feed services.

This package provides tools to create interactive tutorials using R Markdown. Use a combination of narrative, figures, videos, exercises, and quizzes to create self-paced tutorials for learning about R and R packages.

This package provides routines for simple graphs and network analysis. It can handle large graphs very well and provides functions for generating random and regular graphs, graph visualization, centrality methods and much more.

rg is an Emacs search package based on the ripgrep command line tool. It allows one to interactively search based on the editing context then refine or modify the search results.

Repetitive Strain Injury is an illness which can occur as a result of working with a mouse and keyboard. This utility can be used to remind you to take a break now and then.

ryzenadj is an utility to adjust power management settings for AMD Ryzen mobile processors. You will need to ensure it can access /dev/mem, for instance by using the "iomem=relaxed" kernel argument.

rg is an Emacs search package based on the ripgrep command line tool. It allows one to interactively search based on the editing context then refine or modify the search results.

Rserve acts as a socket server (TCP/IP or local sockets) which allows binary requests to be sent to R. Every connection has a separate workspace and working directory. Client-side implementations are available for popular languages such as C/C++ and Java, allowing any application to use facilities of R without the need of linking to R code. Rserve supports remote connection, user authentication and file transfer. A simple R client is included in this package as well.

This package identifies differential expression in high-throughput count data, such as that derived from next-generation sequencing machines, calculating estimated posterior likelihoods of differential expression (or more complex hypotheses) via empirical Bayesian methods.

This package provides a set of annotation maps describing the entire Human Disease Ontology. The annotation data comes from https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology.

The stageR package allows automated stage-wise analysis of high-throughput gene expression data. The method is published in Genome Biology at https://genomebiology.biomedcentral.com/articles/10.1186/s13059-017-1277-0.

This package provides an efficient interface to MPI by utilizing S4 classes and methods with a focus on Single Program/Multiple Data (SPMD) parallel programming style, which is intended for batch parallel execution.

This package provides functions for analyzing multivariate data. Dependencies of the distribution of the specified variable (response variable) to other variables (explanatory variables) are derived and evaluated by the Akaike Information Criterion (AIC).

Ruby-FFI is a Ruby extension for programmatically loading dynamic libraries, binding functions within them, and calling those functions from Ruby code. Moreover, a Ruby-FFI extension works without changes on Ruby and JRuby.

This package provides a Common Lisp library for fetching and parsing RSS feeds data via HTTP. Currently, it supports RSS versions 0.90, 0.91, and 0.92 as well as RSS version 2.

Regrader is a delay effect where the repeats degrade in resolution. This is an unofficial port of the Regrader plugin created by Igorski. It is available as an LV2 plugin and a standalone JACK application.

rust-swc is a typescript/javascript compiler. It consumes a javascript or typescript file which uses recently added features like async-await and emits javascript code which can be executed on old browsers.

Gut 16S sequencing expression data from 992 healthy and moderate-to-severe diarrhetic samples used in Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition'.

The tensor product of two arrays is notionally an outer product of the arrays collapsed in specific extents by summing along the appropriate diagonals. This package allows you to compute the tensor product of arrays.

This package provides a set of signal processing functions originally written for Matlab and GNU Octave. It includes filter generation utilities, filtering functions, resampling routines, and visualization of filter models. It also includes interpolation functions.

This is a package for the manipulation of genetic data (SNPs). Computation of genetic relationship matrix (GRM) and dominance matrix, linkage disequilibrium (LD), and heritability with efficient algorithms for linear mixed models (AIREML).