Parse and inspect Rust literals (i.e. tokens in the Rust programming language representing fixed values). Particularly useful for proc macros, but can also be used outside of a proc-macro context.
CZMQ Ruby bindings, based on the generated low-level FFI bindings of CZMQ. The focus of of CZTop is on being easy to use and providing first class support for security mechanisms.
The cnpy library written by Carl Rogers provides read and write facilities for files created with (or for) the NumPy
extension for Python'. Vectors and matrices of numeric types can be read or written to and from files as well as compressed files. Support for integer files is available if the package has been built with as C++11 which should be the default on all platforms since the release of R 3.3.0.
This package provides a toolbox created by members of the International Union for Conservation of Nature (IUCN) Red List of Ecosystems Committee for Scientific Standards. Primarily, it is a set of tools suitable for calculating the metrics required for making assessments of species and ecosystems against the IUCN Red List of Threatened Species and the IUCN Red List of Ecosystems categories and criteria. See the IUCN website for detailed guidelines, the criteria, publications and other information.
The routine twosample_test()
in this package runs the two sample test using various test statistic. The p values are found via permutation or large sample theory. The routine twosample_power()
allows the calculation of the power in various cases, and plot_power()
draws the corresponding power graphs. The routine run.studies allows a user to quickly study the power of a new method and how it compares to some of the standard ones.
This package provides a custom implementation of the apriori algorithm and binomial tests to identify combinations of features (genes, variants etc) significantly enriched for simultaneous mutations/events from sparse Boolean input, see Vijay Kumar Pounraja, Santhosh Girirajan (2021). Version 1.1 includes a minor adjustment to the number of combinations to be considered for multiple testing correction. This updated version is more conservative in its approach and hence more selective. <doi:10.1101/2021.10.01.462832>.
An R interface for libeemd (Luukko, Helske, Räsänen, 2016) <doi:10.1007/s00180-015-0603-9>, a C library of highly efficient parallelizable functions for performing the ensemble empirical mode decomposition (EEMD), its complete variant (CEEMDAN), the regular empirical mode decomposition (EMD), and bivariate EMD (BEMD). Due to the possible portability issues CRAN version no longer supports OpenMP
, but you can install OpenMP-supported
version from GitHub
: <https://github.com/helske/Rlibeemd/>.
This package provides formatting linting to roxygen2 tags. Linters report roxygen2 tags that do not conform to a standard style. These linters can be a helpful check for building more consistent documentation and to provide reminders about best practices or checks for typos. Default linting suites are provided for common style guides such as the one followed by the tidyverse', though custom linters can be registered by other packages or be custom-tailored to a specific package.
Parsing R code is key to build tools such as linters and stylers. This package provides a binding to the Rust crate ast-grep so that one can parse and explore R code.
This package provides functions to compute pair-wise dissimilarities (distance matrices) and multiple-site dissimilarities, separating the turnover and nestedness-resultant components of taxonomic (incidence and abundance based), functional and phylogenetic beta diversity.
Tree- and rule-based models can be bagged (<doi:10.1007/BF00058655>) using this package and their predictions equations are stored in an efficient format to reduce the model objects size and speed.
The Codemeta Project defines a JSON-LD format for describing software metadata, as detailed at <https://codemeta.github.io>. This package provides core utilities to generate this metadata with a minimum of dependencies.
The cystiSim
package provides an agent-based model for Taenia solium transmission and control. cystiSim
was developed within the framework of CYSTINET, the European Network on taeniosis/cysticercosis, COST ACTION TD1302.
This package provides a drop-in replacement for dplyr', powered by DuckDB
for performance. Offers convenient utilities for working with in-memory and larger-than-memory data while retaining full dplyr compatibility.
Gas/Liquid Chromatography-Mass Spectrometer(GC/LC-MS) Data Analysis for Environmental Science. This package covered topics such molecular isotope ratio, matrix effects and Short-Chain Chlorinated Paraffins analysis etc. in environmental analysis.
Checks to see whether a supplied set of dice (their face values) are transitive, returning pair-win and group-roll win probabilities. Expected returns (mean magnitude of win/loss) are presented as well.
Convenient classes to model fitness landscapes and fitness seascapes. A low-level package with which most users will not interact but upon which other packages modeling fitness landscapes and fitness seascapes will depend.
Growth models and forest production require existing data manipulation and the creation of new data, structured from basic forest inventory data. The purpose of this package is provide functions to support these activities.
An interface for retrieving and displaying the information returned online by Google Trends is provided. Trends (number of hits) over the time as well as geographic representation of the results can be displayed.
Harriet was Charles Darwin's pet tortoise (possibly). harrietr implements some function to manipulate distance matrices and phylogenetic trees to make it easier to plot with ggplot2 and to manipulate using tidyverse tools.
This package provides a collection of functions for sampling and simulating 3D surfaces and objects and estimating metrics like rugosity, fractal dimension, convexity, sphericity, circularity, second moments of area and volume, and more.
This package provides tools for accessing various open data APIs in the Helsinki region in Finland. Current data sources include the Service Map API, Linked Events API, and Helsinki Region Infoshare statistics API.
An interactive document on the topic of K-nearest neighbour (KNN) using rmarkdown and shiny packages. Runtime examples are provided in the package function as well as at <https://kartikeyabolar.shinyapps.io/KNNShiny/>.
Get map data frames for the Indian subcontinent with different region levels (e.g., district, state). The package also offers convenience functions for plotting choropleths, visualizing spatial data, and handling state/district codes.