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r-rprobsup 3.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RProbSup
Licenses: Expat
Synopsis: Calculates Probability of Superiority
Description:

The A() function calculates the A statistic, a nonparametric measure of effect size for two independent groups thatâ s also known as the probability of superiority (Ruscio, 2008), along with its standard error and a confidence interval constructed using bootstrap methods (Ruscio & Mullen, 2012). Optional arguments can be specified to calculate variants of the A statistic developed for other research designs (e.g., related samples, more than two independent groups or related samples; Ruscio & Gera, 2013). <DOI: 10.1037/1082-989X.13.1.19>. <DOI: 10.1080/00273171.2012.658329>. <DOI: 10.1080/00273171.2012.738184>.

r-citation 0.8.2
Propagated dependencies: r-yaml@2.3.10 r-withr@3.0.2 r-jsonlite@2.0.0 r-desc@1.4.3
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/pik-piam/citation
Licenses: FreeBSD
Synopsis: Software Citation Tools
Description:

This package provides a collection of functions to extract citation information from R packages and to deal with files in citation file format (<https://citation-file-format.github.io/>), extending the functionality already provided by the citation() function in the utils package.

r-document 4.0.1
Propagated dependencies: r-rstudioapi@0.17.1 r-roxygen2@7.3.2 r-rcmdcheck@1.4.0 r-fritools@4.5.0 r-desc@1.4.3 r-checkmate@2.3.2 r-callr@3.7.6
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://gitlab.com/fvafrcu/document
Licenses: FreeBSD
Synopsis: Run 'roxygen2' on (Chunks of) Single Code Files
Description:

Have you ever been tempted to create roxygen2'-style documentation comments for one of your functions that was not part of one of your packages (yet)? This is exactly what this package is about: running roxygen2 on (chunks of) a single code file.

r-evdbayes 1.1-3
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=evdbayes
Licenses: GPL 2+
Synopsis: Bayesian Analysis in Extreme Value Theory
Description:

This package provides functions for the Bayesian analysis of extreme value models, using Markov chain Monte Carlo methods. Allows the construction of both uninformative and informed prior distributions for common statistical models applied to extreme event data, including the generalized extreme value distribution.

r-familias 2.6.3
Propagated dependencies: r-rsolnp@1.16 r-kinship2@1.9.6.1
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://www.familias.name/openfamilias.html
Licenses: GPL 3
Synopsis: Probabilities for Pedigrees Given DNA Data
Description:

An interface to the core Familias functions which are programmed in C++. The implementation is described in Egeland, Mostad and Olaisen (1997) <doi:10.1016/S1355-0306(97)72202-0> and Simonsson and Mostad (2016) <doi:10.1016/j.fsigen.2016.04.005>.

r-fdapoifd 1.0.3
Propagated dependencies: r-tibble@3.2.1 r-reshape2@1.4.4 r-patchwork@1.3.0 r-mass@7.3-65 r-magrittr@2.0.3 r-ggplot2@3.5.2 r-fdapace@0.6.0 r-fastgp@1.2
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://github.com/aefdz/fdaPOIFD
Licenses: GPL 3
Synopsis: Partially Observed Integrated Functional Depth
Description:

Applications to visualization, outlier detection and classification. Software companion for Elà as, Antonio, Jiménez, Raúl, Paganoni, Anna M. and Sangalli, Laura M., (2022), "Integrated Depth for Partially Observed Functional Data". Journal of Computational and Graphical Statistics. <doi:10.1080/10618600.2022.2070171>.

r-gunsales 0.1.2
Propagated dependencies: r-zoo@1.8-14 r-x13binary@1.1.61 r-seasonal@1.10.0 r-ggplot2@3.5.2 r-dplyr@1.1.4 r-data-table@1.17.2
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=gunsales
Licenses: FSDG-compatible
Synopsis: Statistical Analysis of Monthly Background Checks of Gun Purchases
Description:

Statistical analysis of monthly background checks of gun purchases for the New York Times story "What Drives Gun Sales: Terrorism, Obama and Calls for Restrictions" at <http://www.nytimes.com/interactive/2015/12/10/us/gun-sales-terrorism-obama-restrictions.html?> is provided.

r-gmvjoint 0.4.5
Propagated dependencies: r-xtable@1.8-4 r-survival@3.8-3 r-statmod@1.5.0 r-reformulas@0.4.1 r-rcpparmadillo@14.4.2-1 r-rcpp@1.0.14 r-pracma@2.4.4 r-mvtnorm@1.3-3 r-mass@7.3-65 r-glmmtmb@1.1.11
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://github.com/jamesmurray7/gmvjoint
Licenses: GPL 3
Synopsis: Joint Models of Survival and Multivariate Longitudinal Data
Description:

Fit joint models of survival and multivariate longitudinal data. The longitudinal data is specified by generalised linear mixed models. The joint models are fit via maximum likelihood using an approximate expectation maximisation algorithm. Bernhardt (2015) <doi:10.1016/j.csda.2014.11.011>.

r-ggreveal 0.1.4
Propagated dependencies: r-tidyr@1.3.1 r-stringr@1.5.1 r-rlang@1.1.6 r-ggplotify@0.1.2 r-ggplot2@3.5.2 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: http://www.weverthon.com/ggreveal/
Licenses: Expat
Synopsis: Reveal a 'ggplot' Incrementally
Description:

This package provides functions that make it easy to reveal ggplot2 graphs incrementally. The functions take a plot produced with ggplot2 and return a list of plots showing data incrementally by panels, layers, groups, the values in an axis or any arbitrary aesthetic.

r-ggquiver 0.3.3
Propagated dependencies: r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://github.com/mitchelloharawild/ggquiver
Licenses: GPL 3
Synopsis: Quiver Plots for 'ggplot2'
Description:

An extension of ggplot2 to provide quiver plots to visualise vector fields. This functionality is implemented using a geom to produce a new graphical layer, which allows aesthetic options. This layer can be overlaid on a map to improve visualisation of mapped data.

r-greta-gp 0.2.2
Propagated dependencies: r-tensorflow@2.16.0 r-rlang@1.1.6 r-greta@0.5.0 r-glue@1.8.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://github.com/greta-dev/greta.gp
Licenses: FSDG-compatible
Synopsis: Gaussian Process Modelling in 'greta'
Description:

This package provides a syntax to create and combine Gaussian process kernels in greta'. You can then them to define either full rank or sparse Gaussian processes. This is an extension to the greta software, Golding (2019) <doi:10.21105/joss.01601>.

r-ip2proxy 1.2.0
Propagated dependencies: r-scales@1.4.0 r-reticulate@1.42.0 r-maps@3.4.2.1 r-jsonlite@2.0.0 r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=ip2proxy
Licenses: Expat
Synopsis: Lookup for IP Address Proxy Information
Description:

Enable user to find the IP addresses which are used as VPN anonymizer, open proxies, web proxies and Tor exits. The package lookup the proxy IP address from IP2Proxy BIN Data file. You may visit <https://lite.ip2location.com> for free database download.

r-levitate 0.2.0
Propagated dependencies: r-stringdist@0.9.15 r-rlang@1.1.6
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://github.com/lewinfox/levitate/
Licenses: GPL 3
Synopsis: Fuzzy String Comparison
Description:

This package provides string similarity calculations inspired by the Python thefuzz package. Compare strings by edit distance, similarity ratio, best matching substring, ordered token matching and set-based token matching. A range of edit distance measures are available thanks to the stringdist package.

r-missdiag 1.0.1
Propagated dependencies: r-formula@1.2-5 r-cobalt@4.6.0
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/sumtxt/missDiag/
Licenses: GPL 3
Synopsis: Comparing Observed and Imputed Values under MAR and MCAR
Description:

This package implements the computation of discrepancy statistics summarizing differences between the density of imputed and observed values and the construction of weights to balance covariates that are part of the missing data mechanism as described in Marbach (2021) <arXiv:2107.05427>.

r-oews2020 1.0.0
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=oews2020
Licenses: Expat
Synopsis: May 2020 Occupational Employment and Wage Statistics
Description:

This package contains data from the May 2020 Occupational Employment and Wage Statistics data release from the U.S. Bureau of Labor Statistics. The dataset covers employment and wages across occupations, industries, states, and at the national level. Metropolitan data is not included.

r-oews2021 1.0.0
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=oews2021
Licenses: Expat
Synopsis: May 2021 Occupational Employment and Wage Statistics
Description:

This package contains data from the May 2021 Occupational Employment and Wage Statistics data release from the U.S. Bureau of Labor Statistics. The dataset covers employment and wages across occupations, industries, states, and at the national level. Metropolitan data is not included.

r-prinvars 1.0.0
Propagated dependencies: r-rdpack@2.6.4 r-pma@1.2-4 r-elasticnet@1.3
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/Ronho/prinvars
Licenses: Expat
Synopsis: Principal Variables
Description:

This package provides methods for reducing the number of features within a data set. See Bauer JO (2021) <doi:10.1145/3475827.3475832> and Bauer JO, Drabant B (2021) <doi:10.1016/j.jmva.2021.104754> for more information on principal loading analysis.

r-sinaplot 1.1.0
Propagated dependencies: r-plyr@1.8.9
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sinaplot
Licenses: GPL 2+
Synopsis: An Enhanced Chart for Simple and Truthful Representation of Single Observations over Multiple Classes
Description:

The sinaplot is a data visualization chart suitable for plotting any single variable in a multiclass data set. It is an enhanced jitter strip chart, where the width of the jitter is controlled by the density distribution of the data within each class.

r-sfdesign 0.1.1
Propagated dependencies: r-spacefillr@0.4.0 r-rcpparmadillo@14.4.2-1 r-rcpp@1.0.14 r-proxy@0.4-27 r-primes@1.6.1 r-nloptr@2.2.1 r-gensa@1.1.14.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SFDesign
Licenses: GPL 2+
Synopsis: Space-Filling Designs
Description:

Construct various types of space-filling designs, including Latin hypercube designs, clustering-based designs, maximin designs, maximum projection designs, and uniform designs (Joseph 2016 <doi:10.1080/08982112.2015.1100447>). It also offers the option to optimize designs based on user-defined criteria.

r-unitizer 1.4.22
Propagated dependencies: r-diffobj@0.3.6 r-crayon@1.5.3
Channel: guix-cran
Location: guix-cran/packages/u.scm (guix-cran packages u)
Home page: https://github.com/brodieG/unitizer
Licenses: GPL 2 GPL 3
Synopsis: Interactive R Unit Tests
Description:

Simplifies regression tests by comparing objects produced by test code with earlier versions of those same objects. If objects are unchanged the tests pass, otherwise execution stops with error details. If in interactive mode, tests can be reviewed through the provided interactive environment.

r-waypoint 1.2.1
Propagated dependencies: r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/w.scm (guix-cran packages w)
Home page: https://mark-eis.github.io/Waypoint/
Licenses: Expat
Synopsis: Convert, Validate, Format and Print Geographic Coordinates and Waypoints
Description:

Convert, validate, format and elegantly print geographic coordinates and waypoints (paired latitude and longitude values) in decimal degrees, degrees and minutes, and degrees, minutes and seconds using high performance C++ code to enable rapid conversion and formatting of large coordinate and waypoint datasets.

r-xesreadr 0.2.3
Propagated dependencies: r-xml2@1.3.8 r-xml@3.99-0.18 r-tidyr@1.3.1 r-stringr@1.5.1 r-purrr@1.0.4 r-lubridate@1.9.4 r-dplyr@1.1.4 r-data-table@1.17.2 r-bupar@0.5.4
Channel: guix-cran
Location: guix-cran/packages/x.scm (guix-cran packages x)
Home page: http://www.bupar.net
Licenses: Expat
Synopsis: Read and Write XES Files
Description:

Read and write XES Files to create event log objects used by the bupaR framework. XES (Extensible Event Stream) is the `IEEE` standard for storing and sharing event data (see <http://standards.ieee.org/findstds/standard/1849-2016.html> for more info).

r-borealis 1.12.0
Propagated dependencies: r-snow@0.4-4 r-rlang@1.1.6 r-r-utils@2.13.0 r-purrr@1.0.4 r-plyr@1.8.9 r-ggplot2@3.5.2 r-genomicranges@1.60.0 r-gamlss-dist@6.1-1 r-gamlss@5.4-22 r-foreach@1.5.2 r-dss@2.56.0 r-dplyr@1.1.4 r-doparallel@1.0.17 r-cowplot@1.1.3 r-bsseq@1.44.1 r-biobase@2.68.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/borealis
Licenses: GPL 3
Synopsis: Bisulfite-seq OutlieR mEthylation At singLe-sIte reSolution
Description:

Borealis is an R library performing outlier analysis for count-based bisulfite sequencing data. It detectes outlier methylated CpG sites from bisulfite sequencing (BS-seq). The core of Borealis is modeling Beta-Binomial distributions. This can be useful for rare disease diagnoses.

r-doscheda 1.30.0
Propagated dependencies: r-vsn@3.76.0 r-stringr@1.5.1 r-shinydashboard@0.7.3 r-shiny@1.10.0 r-reshape2@1.4.4 r-readxl@1.4.5 r-prodlim@2025.04.28 r-matrixstats@1.5.0 r-limma@3.64.0 r-jsonlite@2.0.0 r-httr@1.4.7 r-gridextra@2.3 r-ggplot2@3.5.2 r-dt@0.33 r-drc@3.0-1 r-corrgram@1.14 r-calibrate@1.7.7 r-affy@1.86.0
Channel: guix-bioc
Location: guix-bioc/packages/d.scm (guix-bioc packages d)
Home page: https://bioconductor.org/packages/Doscheda
Licenses: GPL 3
Synopsis: DownStream Chemo-Proteomics Analysis Pipeline
Description:

Doscheda focuses on quantitative chemoproteomics used to determine protein interaction profiles of small molecules from whole cell or tissue lysates using Mass Spectrometry data. The package provides a shiny application to run the pipeline, several visualisations and a downloadable report of an experiment.

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