Allows the user to generate and execute select, insert, update and delete SQL queries the underlying database without having to explicitly write SQL code.

Client interface for the registry API.

Client interface for the registry API.

Estimation, forecasting, simulation, and portfolio construction for regime-switching models with exogenous variables as in Pelletier (2006) <doi:10.1016/j.jeconom.2005.01.013>.

Implementation of Gibbs sampling algorithm for Bayesian Estimation of the Reduced Reparameterized Unified Model ('rrum'), described by Culpepper and Hudson (2017) <doi: 10.1177/0146621617707511>.

Generic functions to analyze the distribution of two continuous variables: conf2d to calculate a smooth empirical confidence region, and freq2d to calculate a frequency distribution.

Estimates two-dimensional local wavelet spectra.

This package provides tools for identifying preferential usage of APA sites, comparing two biological conditions, starting from known alternative sites and alignments obtained from standard RNA-seq experiments.

Relevant Component Analysis (RCA) tries to find a linear transformation of the feature space such that the effect of irrelevant variability is reduced in the transformed space.

This package provides functions for calculating life history metrics using matrix population models ('MPMs'). Described in Jones et al. (2021) <doi:10.1101/2021.04.26.441330>.

Vizualize, analyze and explore networks using Cytoscape via R. Anything you can do using the graphical user interface of Cytoscape, you can now do with a single RCy3 function.

This package provides an implementation of Regularized LS-TreeBoost & LAD-TreeBoost algorithm for Regulatory Network inference from any type of expression data (Microarray/RNA-seq etc).

Slow Feature Analysis (SFA), ported to R based on matlab implementations of SFA: SFA toolkit 1.0 by Pietro Berkes and SFA toolkit 2.8 by Wolfgang Konen.

Identification of genetic variants affecting alternative splicing.

integrated Bayesian Modeling of eQTL data.

Bayesian regularization for feed-forward neural networks.

This package provides functions for handling dates.

Parametric modeling of quantile regression coefficient functions.

Downloads Southern Oscillation Index, Oceanic Nino Index, North Pacific Gyre Oscillation data, North Atlantic Oscillation and Arctic Oscillation. Data sources are described in the help files for each function.

RCAS aims to be a standalone RNA-centric annotation system that provides intuitive reports and publication-ready graphics. This package provides the R library implementing most of the pipeline's features.

This package provides an efficient procedure for fitting the entire solution path for high-dimensional regularized quadratic generalized linear models with interactions effects under the strong or weak heredity constraint.

Programmatic interface to the Web Service methods provided by the USA National Phenology Network (<https://usanpn.org/>), which includes data on various life history events that occur at specific times.

Use the <https://api.nbp.pl/> API through R. Retrieve currency exchange rates and gold prices data published by the National Bank of Poland in form of convenient R objects.

This package provides a translation layer between R and CDO operators. Each operator is it's own function with documentation. Nested or piped functions will be translated into CDO chains.