_            _    _        _         _
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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-dgear 0.1.4
Propagated dependencies: r-desctools@0.99.60
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DGEAR
Licenses: Expat
Build system: r
Synopsis: Differential Gene Expression Analysis with R
Description:

Analyses gene expression data derived from experiments to detect differentially expressed genes by employing the concept of majority voting with five different statistical models. It includes functions for differential expression analysis, significance testing, etc. It simplifies the process of uncovering meaningful patterns and trends within gene expression data, aiding researchers in downstream analysis. Boyer, R.S., Moore, J.S. (1991) <doi:10.1007/978-94-011-3488-0_5>.

r-datamaid 1.4.2
Dependencies: coreutils@9.1 pandoc@2.19.2 git@2.52.0
Propagated dependencies: r-whoami@1.3.0 r-stringi@1.8.7 r-robustbase@0.99-6 r-rmarkdown@2.30 r-rlang@1.1.6 r-pander@0.6.6 r-magrittr@2.0.4 r-htmltools@0.5.8.1 r-haven@2.5.5 r-gridextra@2.3 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/ekstroem/dataMaid
Licenses: GPL 2
Build system: r
Synopsis: Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process
Description:

Data screening is an important first step of any statistical analysis. dataMaid auto generates a customizable data report with a thorough summary of the checks and the results that a human can use to identify possible errors. It provides an extendable suite of test for common potential errors in a dataset.

r-distcrete 1.0.3
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/reconhub/distcrete
Licenses: Expat
Build system: r
Synopsis: Discrete Distribution Approximations
Description:

This package creates discretised versions of continuous distribution functions by mapping continuous values to an underlying discrete grid, based on a (uniform) frequency of discretisation, a valid discretisation point, and an integration range. For a review of discretisation methods, see Chakraborty (2015) <doi:10.1186/s40488-015-0028-6>.

r-diemr 1.5.3
Propagated dependencies: r-zoo@1.8-14 r-vcfr@1.15.0 r-data-table@1.17.8 r-circlize@0.4.16
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://nmartinkova.github.io/genome-polarisation/
Licenses: GPL 3+
Build system: r
Synopsis: Genome Polarization via Diagnostic Index Expectation Maximization
Description:

This package implements a likelihood-based method for genome polarization, identifying which alleles of SNV markers belong to either side of a barrier to gene flow. The approach co-estimates individual assignment, barrier strength, and divergence between sides, with direct application to studies of hybridization. Includes VCF-to-diem conversion and input checks, support for mixed ploidy and parallelization, and tools for visualization and diagnostic outputs. Based on diagnostic index expectation maximization as described in Baird et al. (2023) <doi:10.1111/2041-210X.14010>.

r-deflist 0.2.0
Propagated dependencies: r-rlang@1.1.6 r-purrr@1.2.0 r-memoise@2.0.1 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://bbuchsbaum.github.io/deflist/
Licenses: LGPL 2.1+
Build system: r
Synopsis: Deferred List - A Read-Only List-Like Object with Deferred Access
Description:

This package implements the deflist class, a read-only list-like object that accesses its elements via a function. The deflist class can be used to model deferred access to data or computations by routing indexed list access to a function. This approach is particularly useful when sequential list-like access to data is required but holding all the data in memory at once is not feasible. The package also provides utilities for memoisation and caching to optimize access to frequently requested elements.

r-discretedatasets 0.1.2
Propagated dependencies: r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/DISOhda/DiscreteDatasets
Licenses: GPL 3
Build system: r
Synopsis: Example Data Sets for Use with Discrete Statistical Tests
Description:

This package provides several data sets for use with discrete statistical tests and discrete multiple testing procedures. Some of them are also available as a four-column version, so that each row represents a 2x2 table.

r-der 1.3
Propagated dependencies: r-rfast2@0.1.5.5 r-rfast@2.1.5.2 r-rcppparallel@5.1.11-1 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DER
Licenses: GPL 2+
Build system: r
Synopsis: Income Polarization Index
Description:

Extremely fast and memory efficient computation of the DER (or PaF) income polarization index as proposed by Duclos J. Y., Esteban, J. and Ray D. (2004). "Polarization: concepts, measurement, estimation". Econometrica, 72(6): 1737--1772. <doi:10.1111/j.1468-0262.2004.00552.x>. The index may be computed for a single or for a range of values of the alpha-parameter and bootstrapping is also available.

r-distrex 2.9.6
Propagated dependencies: r-startupmsg@1.0.0 r-distr@2.9.7
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: http://distr.r-forge.r-project.org/
Licenses: LGPL 3
Build system: r
Synopsis: Extensions of Package 'distr'
Description:

Extends package distr by functionals, distances, and conditional distributions.

r-dcmodify 0.9.0
Propagated dependencies: r-yaml@2.3.10 r-validate@1.1.7 r-settings@0.2.7 r-lumberjack@1.3.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/data-cleaning/dcmodify
Licenses: GPL 3
Build system: r
Synopsis: Modify Data Using Externally Defined Modification Rules
Description:

Data cleaning scripts typically contain a lot of if this change that type of statements. Such statements are typically condensed expert knowledge. With this package, such data modifying rules are taken out of the code and become in stead parameters to the work flow. This allows one to maintain, document, and reason about data modification rules as separate entities.

r-dggridr 3.1.1
Propagated dependencies: r-sf@1.0-23 r-s2@1.1.9 r-rcpp@1.1.0 r-collapse@2.1.5
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/r-barnes/dggridR/
Licenses: AGPL 3+
Build system: r
Synopsis: Discrete Global Grids
Description:

Spatial analyses involving binning require that every bin have the same area, but this is impossible using a rectangular grid laid over the Earth or over any projection of the Earth. Discrete global grids use hexagons, triangles, and diamonds to overcome this issue, overlaying the Earth with equally-sized bins. This package provides utilities for working with discrete global grids, along with utilities to aid in plotting such data.

r-decode 1.2
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=decode
Licenses: GPL 3
Build system: r
Synopsis: Differential Co-Expression and Differential Expression Analysis
Description:

Integrated differential expression (DE) and differential co-expression (DC) analysis on gene expression data based on DECODE (DifferEntial CO-expression and Differential Expression) algorithm.

r-dsmolgenisarmadillo 3.0.2
Propagated dependencies: r-urltools@1.7.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-molgenisauth@1.0.0 r-lifecycle@1.0.4 r-jsonlite@2.0.0 r-httr@1.4.7 r-dsi@1.8.0 r-dplyr@1.1.4 r-base64enc@0.1-3
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/molgenis/molgenis-r-datashield/
Licenses: LGPL 2.1+
Build system: r
Synopsis: 'DataSHIELD' Client for 'MOLGENIS Armadillo'
Description:

DataSHIELD is an infrastructure and series of R packages that enables the remote and non-disclosive analysis of sensitive research data. This package is the DataSHIELD interface implementation to analyze data shared on a MOLGENIS Armadillo server. MOLGENIS Armadillo is a light-weight DataSHIELD server using a file store and an RServe server.

r-degreenet 1.3-6
Propagated dependencies: r-network@1.19.0 r-igraph@2.2.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://statnet.org
Licenses: FSDG-compatible
Build system: r
Synopsis: Models for Skewed Count Distributions Relevant to Networks
Description:

Likelihood-based inference for skewed count distributions, typically of degrees used in network modeling. "degreenet" is a part of the "statnet" suite of packages for network analysis. See Jones and Handcock <doi:10.1098/rspb.2003.2369>.

r-debar 0.1.1
Propagated dependencies: r-seqinr@4.2-36 r-aphid@1.3.6 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=debar
Licenses: GPL 3
Build system: r
Synopsis: Post-Clustering Denoiser for COI-5P Barcode Data
Description:

The debar sequence processing pipeline is designed for denoising high throughput sequencing data for the animal DNA barcode marker cytochrome c oxidase I (COI). The package is designed to detect and correct insertion and deletion errors within sequencer outputs. This is accomplished through comparison of input sequences against a profile hidden Markov model (PHMM) using the Viterbi algorithm (for algorithm details see Durbin et al. 1998, ISBN: 9780521629713). Inserted base pairs are removed and deleted base pairs are accounted for through the introduction of a placeholder character. Since the PHMM is a probabilistic representation of the COI barcode, corrections are not always perfect. For this reason debar censors base pairs adjacent to reported indel sites, turning them into placeholder characters (default is 7 base pairs in either direction, this feature can be disabled). Testing has shown that this censorship results in the correct sequence length being restored, and erroneous base pairs being masked the vast majority of the time (>95%).

r-drhutools 1.0.1
Propagated dependencies: r-webshot@0.5.5 r-sp@2.2-0 r-sf@1.0-23 r-purrr@1.2.0 r-png@0.1-8 r-magick@2.9.0 r-leaflet@2.2.3 r-jsonlite@2.0.0 r-htmlwidgets@1.6.4 r-htmltools@0.5.8.1 r-ggplot2@4.0.1 r-gganimate@1.0.11 r-dplyr@1.1.4 r-animation@2.8
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://www.drhuyue.site/software/drhutools/
Licenses: Expat
Build system: r
Synopsis: Political Science Academic Research Gears
Description:

Using these tools to simplify the research process of political science and other social sciences. The current version can create folder system for academic project in political science, calculate psychological trait scores, visualize experimental and spatial data, and set up color-blind palette, functions used in academic research of political psychology or political science in general.

r-deploid-utils 0.0.1
Dependencies: zlib@1.3.1
Propagated dependencies: r-scales@1.4.0 r-rcpp@1.1.0 r-magrittr@2.0.4 r-combinat@0.0-8
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DEploid.utils
Licenses: FSDG-compatible
Build system: r
Synopsis: 'DEploid' Data Analysis and Results Interpretation
Description:

DEploid (Zhu et.al. 2018 <doi:10.1093/bioinformatics/btx530>) is designed for deconvoluting mixed genomes with unknown proportions. Traditional phasing programs are limited to diploid organisms. Our method modifies Li and Stephenâ s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting. This package provides R functions to support data analysis and results interpretation.

r-distrteach 2.9.2
Propagated dependencies: r-startupmsg@1.0.0 r-distrex@2.9.6 r-distr@2.9.7
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: http://distr.r-forge.r-project.org/
Licenses: LGPL 3
Build system: r
Synopsis: Extensions of Package 'distr' for Teaching Stochastics/Statistics in Secondary School
Description:

This package provides flexible examples of LLN and CLT for teaching purposes in secondary school.

r-dwp 1.1
Propagated dependencies: r-vgam@1.1-13 r-statmod@1.5.1 r-sf@1.0-23 r-pracma@2.4.6 r-plotrix@3.8-13 r-numderiv@2016.8-1.1 r-mvtnorm@1.3-3 r-matrixstats@1.5.0 r-mass@7.3-65 r-magrittr@2.0.4 r-invgamma@1.2 r-gtools@3.9.5 r-genest@1.4.9 r-expint@0.1-9 r-boot@1.3-32
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=dwp
Licenses: CC0
Build system: r
Synopsis: Density-Weighted Proportion
Description:

Fit a Poisson regression to carcass distance data and integrate over the searched area at a wind farm to estimate the fraction of carcasses falling in the searched area and format the output for use as the dwp parameter in the GenEst or eoa package for estimating bird and bat mortality, following Dalthorp, et al. (2022) <arXiv:2201.10064>.

r-drillr 0.1
Propagated dependencies: r-httr@1.4.7
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DrillR
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: R Driver for Apache Drill
Description:

This package provides a R driver for Apache Drill<https://drill.apache.org>, which could connect to the Apache Drill cluster<https://drill.apache.org/docs/installing-drill-on-the-cluster> or drillbit<https://drill.apache.org/docs/embedded-mode-prerequisites> and get result(in data frame) from the SQL query and check the current configuration status. This link <https://drill.apache.org/docs> contains more information about Apache Drill.

r-directotree 1.0.0
Propagated dependencies: r-data-tree@1.2.0 r-collapsibletree@0.1.8
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=directotree
Licenses: GPL 3+
Build system: r
Synopsis: Creates an Interactive Tree Structure of a Directory
Description:

Represents the content of a directory as an interactive collapsible tree. Offers the possibility to assign a text (e.g., a Readme.txt') to each folder (represented as a clickable node), so that when the user hovers the pointer over a node, the corresponding text is displayed as a tooltip.

r-diagonals 6.4.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://qua.st/diagonals
Licenses: GPL 3
Build system: r
Synopsis: Block Diagonal Extraction or Replacement
Description:

Several tools for handling block-matrix diagonals and similar constructs are implemented. Block-diagonal matrices can be extracted or removed using two small functions implemented here. In addition, non-square matrices are supported. Block diagonal matrices occur when two dimensions of a data set are combined along one edge of a matrix. For example, trade-flow data in the decompr and gvc packages have each country-industry combination occur along both edges of the matrix.

r-desirability2 0.2.0
Propagated dependencies: r-tibble@3.3.0 r-s7@0.2.1 r-rlang@1.1.6 r-purrr@1.2.0 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://desirability2.tidymodels.org
Licenses: Expat
Build system: r
Synopsis: Desirability Functions for Multiparameter Optimization
Description:

In-line functions for multivariate optimization via desirability functions (Derringer and Suich, 1980, <doi:10.1080/00224065.1980.11980968>) with easy use within dplyr pipelines.

r-dlegfm 0.4.0
Propagated dependencies: r-elasticnet@1.3
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DLEGFM
Licenses: Expat
Build system: r
Synopsis: Distributed Loading Estimation for General Factor Model
Description:

The load estimation method is based on a general factor model to solve the estimates of load and specific variance. The philosophy of the package is described in Guangbao Guo. (2022). <doi:10.1007/s00180-022-01270-z>.

r-dedooser 2.0.0.2
Propagated dependencies: r-wordcloud2@0.2.1 r-tidytext@0.4.3 r-tidyr@1.3.1 r-tibble@3.3.0 r-purrr@1.2.0 r-openxlsx@4.2.8.1 r-labelled@2.16.0 r-knitr@1.50 r-kableextra@1.4.0 r-igraph@2.2.1 r-haven@2.5.5 r-ggraph@2.2.2 r-ggplot2@4.0.1 r-dt@0.34.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DedooseR
Licenses: FSDG-compatible
Build system: r
Synopsis: Monitoring and Analyzing Dedoose Qualitative Data Exports
Description:

Streamlines analysis of qualitative data exported from Dedoose <https://www.dedoose.com>. Supports monitoring thematic saturation, calculating code frequencies, organizing excerpts, generating dynamic codebooks, and producing code network maps within R'.

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Total results: 68658