This package provides a set of tools to extract bibliographic content from OpenAlex database using API <https://docs.openalex.org>.

This package provides functions for converting and processing network data from a SpatialLinesDataFrame -Class object to an igraph'-Class object.

Interfaces the stepcount Python module <https://github.com/OxWearables/stepcount> to estimate step counts and other activities from accelerometry data.

This package provides a tidy interface to data.table', giving users the speed of data.table while using tidyverse-like syntax.

To give the exactly p-value and q-value of MeDIP-seq and MRE-seq data for different samples comparation.

Codelink Mouse Whole Genome Bioarray (~36 000 mouse gene targets) annotation data (chip mwgcod) assembled using data from public repositories.

Data objects necessary to some mCSEA package functions. There are also example data objects to illustrate mCSEA package functionality.

MyVariant.info is a comprehensive aggregation of variant annotation resources. myvariant is a wrapper for querying MyVariant.info services.

PhenoPath infers genomic trajectories (pseudotimes) in the presence of heterogeneous genetic and environmental backgrounds and tests for interactions between them.

The data employed in the vignette of the QUBIC package. These data belong to Many Microbe Microarrays Database and STRING v10.

This package provides dataset samples (Affymetrix: Expression, Gene, Exon, SNP; NimbleGen: Expression, Tiling) to be used with the oligo package.

This package provides functions to estimate a bipartite graph of protein complex membership using AP-MS data.

This package provides methods and functionality to analyze flow data that is beyond the basic infrastructure provided by the flowCore package.

This package provides an array-like container for convenient access and manipulation of HDF5 datasets. It supports delayed operations and block processing.

This package provides tools to create a measure of inter-point dissimilarity useful for clustering mixed data, and, optionally, perform the clustering.

This package provides routines for the polynomial spline fitting routines hazard regression, hazard estimation with flexible tails, logspline, lspec, polyclass, and polymars.

This package provides a Ruby wrapper for the OAuth 2.0 protocol built with a similar style to the original OAuth spec.

Rendering Extension defines a protocol for a digital image composition as the foundation of a new rendering model within the X Window System.

This package provides typed parameter documentation tags for integration with roxygen2'. Typed parameter tags provide a consistent interface for annotating expected types for parameters and returned values. Tools for converting from existing styles are also provided to easily adapt projects which implement typed documentation by convention rather than tag. Use the default format or provide your own.

The ability to plot raster graphics in PDF files can be useful when one needs multi-page documents, but the plots contain so many individual elements that (the usual) use of vector graphics results in inconveniently large file sizes. Internally, the package plots each individual page as a PNG, and then combines them in one PDF file.

Interface around JDemetra+ (<https://github.com/jdemetra/jdemetra-app>), the seasonal adjustment software officially recommended to the members of the European Statistical System (ESS) and the European System of Central Banks. It offers full access to all options and outputs of JDemetra+', including the two leading seasonal adjustment methods TRAMO/SEATS+ and X-12ARIMA/X-13ARIMA-SEATS.

Download and handle spatial and temporal data from the CAMELS-CL dataset (Catchment Attributes and Meteorology for Large Sample Studies, Chile) <https://camels.cr2.cl/>, developed by Alvarez-Garreton et al. (2018) <doi:10.5194/hess-22-5817-2018>. The package does not generate new data, it only facilitates direct access to the original dataset for hydrological analyses.

This package provides classes and functions for modelling health care interventions using decision trees and semi-Markov models. Mechanisms are provided for associating an uncertainty distribution with each source variable and for ensuring transparency of the mathematical relationships between variables. The package terminology follows Briggs "Decision Modelling for Health Economic Evaluation" (2006, ISBN:978-0-19-852662-9).

Storing very large data objects on a local drive, while still making it possible to manipulate the data in an efficient manner.