An implementation to compute an optimal adaptive allocation rule using deep reinforcement learning in a dose-response study (Matsuura et al. (2022) <doi:10.1002/sim.9247>). The adaptive allocation rule can directly optimize a performance metric, such as power, accuracy of the estimated target dose, or mean absolute error over the estimated dose-response curve.

This package provides functions to estimate a bipartite graph of protein complex membership using AP-MS data.

This package provides an array-like container for convenient access and manipulation of HDF5 datasets. It supports delayed operations and block processing.

This package provides dataset samples (Affymetrix: Expression, Gene, Exon, SNP; NimbleGen: Expression, Tiling) to be used with the oligo package.

This package provides methods and functionality to analyze flow data that is beyond the basic infrastructure provided by the flowCore package.

This package provides routines for the polynomial spline fitting routines hazard regression, hazard estimation with flexible tails, logspline, lspec, polyclass, and polymars.

This package provides tools to create a measure of inter-point dissimilarity useful for clustering mixed data, and, optionally, perform the clustering.

This package provides a Ruby wrapper for the OAuth 2.0 protocol built with a similar style to the original OAuth spec.

Rendering Extension defines a protocol for a digital image composition as the foundation of a new rendering model within the X Window System.

Codelink Mouse Whole Genome Bioarray (~36 000 mouse gene targets) annotation data (chip mwgcod) assembled using data from public repositories.

To give the exactly p-value and q-value of MeDIP-seq and MRE-seq data for different samples comparation.

MyVariant.info is a comprehensive aggregation of variant annotation resources. myvariant is a wrapper for querying MyVariant.info services.

Data objects necessary to some mCSEA package functions. There are also example data objects to illustrate mCSEA package functionality.

This package provides visualization functionality for untargeted LC-MS metabolomics research. Includes quality control visualizations, feature-wise visualizations and results visualizations.

PhenoPath infers genomic trajectories (pseudotimes) in the presence of heterogeneous genetic and environmental backgrounds and tests for interactions between them.

The data employed in the vignette of the QUBIC package. These data belong to Many Microbe Microarrays Database and STRING v10.

Helper functions for working with Regional Ocean Modeling System ROMS output. See <https://www.myroms.org/> for more information about ROMS'.

Collect your data on digital marketing campaigns from Apple Search Ads using the Windsor.ai API <https://windsor.ai/api-fields/>.

US baby names provided by the SSA. This package contains all names used for at least 5 children of either sex.

Computation of bootstrap p-values through inversion of confidence intervals, including convenience functions for regression models and tests of location.

Generate and analyse crossover designs from combinatorial or search algorithms as well as from literature and a GUI to access them.

Calculates metrics of proportionality using the logit-normal multinomial model. It can also provide empirical and plugin estimates of these metrics.

Generate descriptive statistics such as measures of location, dispersion, frequency tables, cross tables, group summaries and multiple one/two way tables.

Simple functions to deflate nominal Brazilian Reais using several popular price indexes downloaded from the Brazilian Institute for Applied Economic Research.