Utility functions produced specifically for (but not limited to) working with ProjectTemplate
data pipelines. This package helps to quickly create and manage sequentially numbered scripts, quickly set up logging with log4r and functions to help debug and monitor procedures.
It performs a fast multi-trait genome-wide association analysis based on seemingly unrelated regressions. It tests for pleiotropic effects based on a series of Intersection-Union Wald tests. The package can handle large and unbalanced data and plot results.
Perform a supervised data analysis on a database through a shiny graphical interface. It includes methods such as K-Nearest Neighbors, Decision Trees, ADA Boosting, Extreme Gradient Boosting, Random Forest, Neural Networks, Deep Learning, Support Vector Machines and Bayesian Methods.
Calculate and compare lower confidence bounds for binomial series system reliability. The R shiny application, launched by the function launch_app()
, weaves together a workflow of customized simulations and delta coverage calculations to output recommended lower confidence bound methods.
Execute files of SQL and manage database connections. SQL statements and queries may be interpolated with string literals. Execution of individual statements and queries may be controlled with keywords. Multiple connections may be defined with YAML and accessed by name.
Modifies the progress()
function from httr package to let it send output to progressBar()
function from shinyWidgets
package. It is just a tweak at the original functions from httr package to make it smooth for shiny developers.
This package provides a tool to interactively explore the embeddings created by dimension reduction methods such as Principal Components Analysis (PCA), Multidimensional Scaling (MDS), T-distributed Stochastic Neighbour Embedding (t-SNE), Uniform Manifold Approximation and Projection (UMAP) or any other.
This package provides a mostly pure-R implementation of the RAKE algorithm (Rose, S., Engel, D., Cramer, N. and Cowley, W. (2010) <doi:10.1002/9780470689646.ch1>), which can be used to extract keywords from documents without any training data.
Access Wikipedia through the several MediaWiki
APIs (<https://www.mediawiki.org/wiki/API>), as well as through the XTools API (<https://www.mediawiki.org/wiki/XTools/API>). Ensure your API calls are correct, and receive results in tidy tibbles.
This package provides a fast and elegant interface for generating XML fragments and documents. It can be used in companion with R packages XML or xml2 to generate XML documents. The fast XML generation is implemented using the Rcpp package.
This package contains some functions to help users (especially data explorers) to make more sense of their variables and take the most out of variables and hardware resources. Functions in this package are supposed to be efficient and easy to use.
This is the official Emacs package for Racer. It supports code completion of variables, functions and modules. It can also jump to definition of functions and types, and show a help buffer based on the docstring of the thing at point.
The x25519 gem is an efficient public key cryptography library for Ruby providing key exchange/agreement via the X25519 (as known as Curve25519) Elliptic Curve Diffie-Hellman function as described in RFC 7748.
This package provides a framework with tools to compare two random variables via stochastic dominance. See the README.md at <https://github.com/EtorArza/RVCompare>
for a quick start guide. It can compute the Cp and Cd of two probability distributions and the Cumulative Difference Plot as explained in E. Arza (2022) <doi:10.1080/10618600.2022.2084405>. Uses bootstrap or DKW-bounds to compute the confidence bands of the cumulative distributions. These two methods are described in B. Efron. (1979) <doi:10.1214/aos/1176344552> and P. Massart (1990) <doi:10.1214/aop/1176990746>.
This package adds indicators (spinner, progress bar, gif) that you can use in your Shiny applications to show the user that the server is busy. It also provides other tools to let your users know something is happening (send notifications, reports, ...).
Examples of datasets on allometry, the study of the relationship of biological traits to body size. This package contains the dataset of morphological measurement taken from 113 maritime earwigs (Anisolabis maritima) by Matsuzawa and Konuma (2025) <doi:10.1093/biolinnean/blaf031>.
Convert populations into integer number of seats for legislative bodies. Implements apportionment methods used historically and currently in the United States for reapportionment after the Census, as described in <https://www.census.gov/history/www/reference/apportionment/methods_of_apportionment.html>.
Allows users to easily visualize data from the BLS (United States of America Bureau of Labor Statistics) <https://www.bls.gov>. Currently unemployment data series U1-U6 are available. Not affiliated with the Bureau of Labor Statistics or United States Government.
An implementation of the Bayesian model averaging method of Psioda and others (2019) <doi:10.1093/biostatistics/kxz014> for basket trials. Contains a user-friendly wrapper for simulating basket trials under conditions and analyzing them with a Bayesian model averaging approach.
Information on activities to promote scholarships in Brazil and abroad for international mobility programs, recorded in Capes computerized payment systems. The CAPES database refers to international mobility programs for the period from 2010 to 2019 <https://dadosabertos.capes.gov.br/dataset/>.
Robust regression methods for compositional data. The distribution of the estimates can be approximated with various bootstrap methods. These bootstrap methods are available for the compositional as well as for standard robust regression estimates. This allows for direct comparison between them.
Simulates the soil water balance (soil moisture, evapotranspiration, leakage and runoff), rainfall series by using the marked Poisson process and the vegetation growth through the normalized difference vegetation index (NDVI). Please see Souza et al. (2016) <doi:10.1002/hyp.10953>.
This package provides functions to switch the BLAS'/'LAPACK optimized backend and change the number of threads without leaving the R session, which needs to be linked against the FlexiBLAS
wrapper library <https://www.mpi-magdeburg.mpg.de/projects/flexiblas>.
Helps you imagine your data before you collect it. Hierarchical data structures and correlated data can be easily simulated, either from random number generators or by resampling from existing data sources. This package is faster with data.table and mvnfast installed.