_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-altmeta 4.2
Propagated dependencies: r-coda@0.19-4.1 r-lme4@1.1-37 r-matrix@1.7-3 r-metafor@4.8-0 r-rjags@4-17
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/altmeta/
Licenses: GPL 2+
Synopsis: Alternative meta-analysis methods
Description:

This package provides alternative statistical methods for meta-analysis, including:

  1. bivariate generalized linear mixed models for synthesizing odds ratios, relative risks, and risk differences

  2. heterogeneity tests and measures that are robust to outliers;

  3. measures, tests, and visualization tools for publication bias or small-study effects;

  4. meta-analysis of diagnostic tests for synthesizing sensitivities, specificities, etc.;

  5. meta-analysis methods for synthesizing proportions;

  6. models for multivariate meta-analysis.

r-rcppannoy 0.0.22
Propagated dependencies: r-rcpp@1.0.14
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/RcppAnnoy/
Licenses: GPL 2+ ASL 2.0
Synopsis: Rcpp bindings for Annoy, a library for Approximate Nearest Neighbors
Description:

Annoy is a small C++ library for Approximate Nearest Neighbors written for efficient memory usage as well an ability to load from and save to disk. This package provides an R interface.

r-gh 1.5.0
Propagated dependencies: r-cli@3.6.5 r-gitcreds@0.1.2 r-glue@1.8.0 r-httr2@1.1.2 r-ini@0.3.1 r-jsonlite@2.0.0 r-lifecycle@1.0.4 r-rlang@1.1.6
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/r-lib/gh#readme
Licenses: Expat
Synopsis: Access the GitHub API via R
Description:

This package provides a minimal R client to access the GitHub API.

r-leiden 0.4.3.1
Propagated dependencies: r-igraph@2.1.4 r-matrix@1.7-3 r-reticulate@1.42.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/TomKellyGenetics/leiden
Licenses: GPL 3
Synopsis: R implementation of Leiden clustering algorithm
Description:

This package implements the Python leidenalg module to be called in R. It enables clustering using the Leiden algorithm for partitioning a graph into communities. See also Traag et al (2018) "From Louvain to Leiden: guaranteeing well-connected communities." <arXiv:1810.08473>.

r-accelerometry 3.1.2
Propagated dependencies: r-dvmisc@1.1.4 r-rcpp@1.0.14
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/accelerometry/
Licenses: GPL 3
Synopsis: Functions for processing accelerometer data
Description:

This package provides a collection of functions that perform operations on time-series accelerometer data, such as identify the non-wear time, flag minutes that are part of an activity bout, and find the maximum 10-minute average count value. The functions are generally very flexible, allowing for a variety of algorithms to be implemented.

r-cosinor 1.2.3
Propagated dependencies: r-ggplot2@3.5.2 r-shiny@1.10.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/sachsmc/cosinor
Licenses: Expat
Synopsis: Tools for estimating and predicting the Cosinor model
Description:

This package provides a set of simple functions that transforms longitudinal data to estimate the cosinor linear model as described in Tong (1976). Methods are given to summarize the mean, amplitude and acrophase, to predict the mean annual outcome value, and to test the coefficients.

r-coda 0.19-4.1
Propagated dependencies: r-lattice@0.22-7
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/coda
Licenses: GPL 2+
Synopsis: Package for output analysis and diagnostics for MCMC
Description:

This package provides functions for summarizing and plotting the output from Markov Chain Monte Carlo (MCMC) simulations, as well as diagnostic tests of convergence to the equilibrium distribution of the Markov chain.

r-xfun 0.52
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/yihui/xfun
Licenses: Expat
Synopsis: Miscellaneous functions
Description:

This package provides miscellaneous functions commonly used in other packages maintained by Yihui Xie.

r-ggbeeswarm 0.7.2
Propagated dependencies: r-beeswarm@0.4.0 r-cli@3.6.5 r-ggplot2@3.5.2 r-lifecycle@1.0.4 r-vipor@0.4.7
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/eclarke/ggbeeswarm
Licenses: GPL 2+
Synopsis: Categorical scatter (violin point) plots
Description:

This package provides two methods of plotting categorical scatter plots such that the arrangement of points within a category reflects the density of data at that region, and avoids over-plotting.

r-countrycode 1.6.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://vincentarelbundock.github.io/countrycode/
Licenses: GPL 3
Synopsis: Convert country names and country codes
Description:

This package lets you standardize country names, convert them into one of 40 different coding schemes, convert between coding schemes, and assign region descriptors.

r-gower 1.0.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/markvanderloo/gower
Licenses: GPL 3
Synopsis: Gower's distance
Description:

This package provides tools to compute Gower's distance (or similarity) coefficient between records, and to compute the top-n matches between records. Core algorithms are executed in parallel on systems supporting OpenMP.

r-cmaesr 1.0.3
Propagated dependencies: r-bbmisc@1.13 r-checkmate@2.3.2 r-ggplot2@3.5.2 r-paramhelpers@1.14.2 r-smoof@1.6.0.3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/jakobbossek/cmaesr
Licenses: FreeBSD
Synopsis: Covariance matrix adaptation evolution strategy
Description:

This is a pure R implementation of the Covariance Matrix Adaptation Evolution Strategy (CMA-ES) with optional restarts (IPOP-CMA-ES).

r-confintr 1.0.2
Propagated dependencies: r-boot@1.3-31
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/mayer79/confintr
Licenses: GPL 2+
Synopsis: Confidence intervals
Description:

This package calculates classic and/or bootstrap confidence intervals for many parameters such as the population mean, variance, interquartile range (IQR), median absolute deviation (MAD), skewness, kurtosis, Cramer's V, odds ratio, R-squared, quantiles (including median), proportions, different types of correlation measures, difference in means, quantiles and medians. Many of the classic confidence intervals are described in Smithson, M. (2003, ISBN: 978-0761924999). Bootstrap confidence intervals are calculated with the R package boot. Both one- and two-sided intervals are supported.

r-compquadform 1.4.3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/CompQuadForm
Licenses: GPL 2+
Synopsis: Distribution function of quadratic forms in normal variables
Description:

This package provides functions to compute the distribution function of quadratic forms in normal variables using Imhof's method, Davies's algorithm, Farebrother's algorithm or Liu et al.'s algorithm.

r-packcircles 0.3.7
Propagated dependencies: r-checkmate@2.3.2 r-rcpp@1.0.14
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/mbedward/packcircles
Licenses: Expat
Synopsis: Circle Packing
Description:

Algorithms to find arrangements of non-overlapping circles.

r-flextable 0.9.8
Propagated dependencies: r-data-table@1.17.4 r-gdtools@0.4.2 r-htmltools@0.5.8.1 r-knitr@1.50 r-officer@0.6.10 r-ragg@1.4.0 r-rlang@1.1.6 r-rmarkdown@2.29 r-uuid@1.2-1 r-xml2@1.4.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://davidgohel.github.io/flextable
Licenses: GPL 3
Synopsis: Functions for tabular reporting
Description:

This package provides tools to create pretty tables for HTML documents and other formats. Functions are provided to let users create tables, modify and format their content. It extends the officer package and can be used within R markdown documents when rendering to HTML and to Word documents.

r-raceid 0.3.9
Propagated dependencies: r-cluster@2.1.8.1 r-coop@0.6-3 r-fateid@0.2.2 r-fnn@1.1.4.1 r-fpc@2.2-13 r-ggplot2@3.5.2 r-harmony@1.2.3 r-ica@1.0-3 r-igraph@2.1.4 r-irlba@2.3.5.1 r-leiden@0.4.3.1 r-locfit@1.5-9.12 r-mass@7.3-65 r-matrix@1.7-3 r-matrixstats@1.5.0 r-pheatmap@1.0.12 r-princurve@2.1.6 r-quadprog@1.5-8 r-randomforest@4.7-1.2 r-rcolorbrewer@1.1-3 r-rcpp@1.0.14 r-rtsne@0.17 r-runner@0.4.4 r-umap@0.2.10.0 r-vegan@2.6-10
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=RaceID
Licenses: GPL 3
Synopsis: Algorithm for inferring cell types from single-cell RNA-seq data
Description:

This tool provides an algorithm to identify rare cell types in single-cell data. It also identifies abundant cell types. The method is based on transcript counts obtained with unique molecular identifies.

r-lpsolve 5.6.23
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/lpSolve
Licenses: LGPL 2.0
Synopsis: R interface to Lp_solve to solve linear/integer programs
Description:

Lp_solve is software for solving linear, integer and mixed integer programs. This implementation supplies a "wrapper" function in C and some R functions that solve general linear/integer problems, assignment problems, and transportation problems.

r-effsize 0.8.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/mtorchiano/effsize/
Licenses: GPL 2
Synopsis: Efficient effect size computation
Description:

This package provides a collection of functions to compute the standardized effect sizes for experiments (Cohen d, Hedges g, Cliff delta, Vargha-Delaney A). The computation algorithms have been optimized to allow efficient computation even with very large data sets.

r-mlearning 1.2.1
Propagated dependencies: r-class@7.3-23 r-e1071@1.7-16 r-ipred@0.9-15 r-mass@7.3-65 r-nnet@7.3-20 r-randomforest@4.7-1.2 r-rpart@4.1.24
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.sciviews.org/zooimage
Licenses: GPL 2+
Synopsis: Machine learning algorithms with unified interface
Description:

This package provides a unified interface to various machine learning algorithms. Confusion matrices are provided too.

r-hiddenmarkov 1.8-14
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/HiddenMarkov/
Licenses: GPL 2+
Synopsis: Hidden markov models for R
Description:

This package contains functions for the analysis of Discrete Time Hidden Markov Models, Markov Modulated GLMs and the Markov Modulated Poisson Process. It includes functions for simulation, parameter estimation, and the Viterbi algorithm. The algorithms are based of those of Walter Zucchini.

r-umap 0.2.10.0
Propagated dependencies: r-matrix@1.7-3 r-openssl@2.3.3 r-rcpp@1.0.14 r-reticulate@1.42.0 r-rspectra@0.16-2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/tkonopka/umap
Licenses: Expat
Synopsis: Uniform manifold approximation and projection
Description:

Uniform manifold approximation and projection is a technique for dimension reduction. This package provides an interface to the UMAP algorithm in R, including a translation of the original algorithm into R.

r-repr 1.1.7
Propagated dependencies: r-base64enc@0.1-3 r-htmltools@0.5.8.1 r-jsonlite@2.0.0 r-pillar@1.10.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/repr/
Licenses: GPL 3
Synopsis: Serializable representations
Description:

This package provides string and binary representations of objects for several formats and MIME types.

r-tseries 0.10-58
Propagated dependencies: r-jsonlite@2.0.0 r-quadprog@1.5-8 r-quantmod@0.4.27 r-zoo@1.8-14
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/tseries/
Licenses: GPL 2
Synopsis: Time series analysis and computational finance
Description:

This package provides functions relating to time series analysis and computational finance.

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