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This package provides functions to numericise R objects (coerce to numeric objects), summarise MCMC (Monte Carlo Markov Chain) samples and calculate deviance residuals as well as R translations of some BUGS (Bayesian Using Gibbs Sampling), JAGS (Just Another Gibbs Sampler), STAN and TMB (Template Model Builder) functions.
Runs a Shiny App in the local machine for basic statistical and graphical analyses. The point-and-click interface of Shiny App enables obtaining the same analysis outputs (e.g., plots and tables) more quickly, as compared with typing the required code in R, especially for users without much experience or expertise with coding. Examples of possible analyses include tabulating descriptive statistics for a variable, creating histograms by experimental groups, and creating a scatter plot and calculating the correlation between two variables.
Given a continuous-time dynamic network, this package allows one to fit a stochastic blockmodel where nodes belonging to the same group create interactions and non-interactions of similar lengths. This package implements the methodology described by R. Rastelli and M. Fop (2020) <doi:10.1007/s11634-020-00403-w>.
This package provides tools for fitting the Extended Empirical Saddlepoint (EES) density of Fasiolo et al. (2018) <doi:10.1214/18-EJS1433>.
Fit and visualize the results of a Bayesian analysis of networks commonly found in psychology. The package supports fitting cross-sectional network models fitted using the packages BDgraph', bgms and BGGM', as well as network comparison fitted using the bgms and BBGM'. The package provides the parameter estimates, posterior inclusion probabilities, inclusion Bayes factor, and the posterior density of the parameters. In addition, for BDgraph and bgms it allows to assess the posterior structure space. Furthermore, the package comes with an extensive suite for visualizing results.
Estimation of production functions by the Olley-Pakes, Levinsohn-Petrin and Wooldridge methodologies. The package aims to reproduce the results obtained with the Stata's user written opreg <http://www.stata-journal.com/article.html?article=st0145> and levpet <http://www.stata-journal.com/article.html?article=st0060> commands. The first was originally proposed by Olley, G.S. and Pakes, A. (1996) <doi:10.2307/2171831>. The second by Levinsohn, J. and Petrin, A. (2003) <doi:10.1111/1467-937X.00246>. And the third by Wooldridge (2009) <doi:10.1016/j.econlet.2009.04.026>.
The purpose of this package is to generate trees and validate unverified code. Trees are made by parsing a statement into a verification tree data structure. This will make it easy to port the statement into another language. Safe statement evaluations are done by executing the verification trees.
Ever read or wrote source files containing sectioning comments? If these comments are markdown style section comments, you can excerpt them and set a table of contents using the python package excerpts (<https://pypi.org/project/excerpts/>).
Estimates linear panel event study models. Plots coefficients following the recommendations in Freyaldenhoven et al. (2021) <doi:10.3386/w29170>. Includes sup-t bands, testing for key hypotheses, least wiggly path through the Wald region. Allows instrumental variables estimation following Freyaldenhoven et al. (2019) <doi:10.1257/aer.20180609>.
This package provides functions for easy building of error correction models (ECM) for time series regression.
This package implements the Edwards (1997) <doi:10.1002/j.1551-8833.1997.tb08229.x> Langmuir-based semi-empirical coagulation model, which predicts the concentration of organic carbon remaining in water after treatment with an Al- or Fe-based coagulant. Data and methods are provided to optimise empirical coefficients.
An implementation of Bayesian hierarchical models for faecal egg count data to assess anthelmintic efficacy. Bayesian inference is done via MCMC sampling using Stan <https://mc-stan.org/>.
Padroniza endereços brasileiros a partir de diferentes critérios. Os métodos de padronização incluem apenas manipulações básicas de strings, não oferecendo suporte a correspondências probabilà sticas entre strings. (Standardizes brazilian addresses using different criteria. Standardization methods include only basic string manipulation, not supporting probabilistic matches between strings.).
This is a port of Fortran ETERNA 3.4 <http://igets.u-strasbg.fr/soft_and_tool.php> by H.G. Wenzel for calculating synthetic Earth tides using the Hartmann and Wenzel (1994) <doi:10.1029/95GL03324> or Kudryavtsev (2004) <doi:10.1007/s00190-003-0361-2> tidal catalogs.
This package implements two estimations related to the foundations of info metrics applied to ecological inference. These methodologies assess the lack of disaggregated data and provide an approach to obtaining disaggregated territorial-level data. For more details, see the following references: Fernández-Vázquez, E., Dà az-Dapena, A., Rubiera-Morollón, F. et al. (2020) "Spatial Disaggregation of Social Indicators: An Info-Metrics Approach." <doi:10.1007/s11205-020-02455-z>. Dà az-Dapena, A., Fernández-Vázquez, E., Rubiera-Morollón, F., & Vinuela, A. (2021) "Mapping poverty at the local level in Europe: A consistent spatial disaggregation of the AROPE indicator for France, Spain, Portugal and the United Kingdom." <doi:10.1111/rsp3.12379>.
Likelihood-based approaches to estimate linear regression parameters and treatment effects in the presence of endogeneity. Specifically, this package includes James Heckman's classical simultaneous equation models-the sample selection model for outcome selection bias and hybrid model with structural shift for endogenous treatment. For more information, see the seminal paper of Heckman (1978) <DOI:10.3386/w0177> in which the details of these models are provided. This package accommodates repeated measures on subjects with a working independence approach. The hybrid model further accommodates treatment effect modification.
Calculates the (approximate) effective number of clusters for a regression model, as described in Carter, Schnepel, and Steigerwald (2017) <doi:10.1162/REST_a_00639>. The effective number of clusters is a statistic to assess the reliability of asymptotic inference when sampling or treatment assignment is clustered. Methods are implemented for stats::lm(), plm::plm(), and fixest::feols(). There is also a formula method.
Implementation of a function which calculates the empirical excess mass for given \eqn\lambda and given maximal number of modes (excessm()). Offering powerful plot features to visualize empirical excess mass (exmplot()). This includes the possibility of drawing several plots (with different maximal number of modes / cut off values) in a single graph.
Ensemble Model Output Statistics to create probabilistic forecasts from ensemble forecasts and weather observations.
Three sets of data and functions for informing ecosystem restoration decisions, particularly in the context of the U.S. Army Corps of Engineers. First, model parameters are compiled as a data set and associated metadata for over 300 habitat suitability models developed by the U.S. Fish and Wildlife Service (USFWS 1980, <https://www.fws.gov/policy-library/870fw1>). Second, functions for conducting habitat suitability analyses both for the models described above as well as generic user-specified model parameterizations. Third, a suite of decision support tools for conducting cost-effectiveness and incremental cost analyses (Robinson et al. 1995, IWR Report 95-R-1, U.S. Army Corps of Engineers).
This package implements the Polynomial Maximization Method ('PMM') for parameter estimation in linear and time series models when error distributions deviate from normality. The PMM2 variant achieves lower variance parameter estimates compared to ordinary least squares ('OLS') when errors exhibit significant skewness. Includes methods for linear regression, AR'/'MA'/'ARMA'/'ARIMA models, and bootstrap inference. Methodology described in Zabolotnii, Warsza, and Tkachenko (2018) <doi:10.1007/978-3-319-77179-3_75>, Zabolotnii, Tkachenko, and Warsza (2022) <doi:10.1007/978-3-031-03502-9_37>, and Zabolotnii, Tkachenko, and Warsza (2023) <doi:10.1007/978-3-031-25844-2_21>.
This package provides functions for computing test reliability and conditional standard error of measurement (CSEM) based on the methods described in the Reliability in Educational Measurement chapter of the 5th edition of "Educational Measurement" by Lee and Harris (2025, ISBN:9780197654965).
API wrapper to download statistical information from the Economic Statistics System (ECOS) of the Bank of Korea <https://ecos.bok.or.kr/api/#/>.
This package provides functions to align curves and to compute mean curves based on the elastic distance defined in the square-root-velocity framework. For more details on this framework see Srivastava and Klassen (2016, <doi:10.1007/978-1-4939-4020-2>). For more theoretical details on our methods and algorithms see Steyer et al. (2023, <doi:10.1111/biom.13706>) and Steyer et al. (2023, <arXiv:2305.02075>).