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r-consensus 1.28.0
Propagated dependencies: r-rcolorbrewer@1.1-3 r-matrixstats@1.5.0 r-gplots@3.2.0
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: https://bioconductor.org/packages/consensus
Licenses: Modified BSD
Build system: r
Synopsis: Cross-platform consensus analysis of genomic measurements via interlaboratory testing method
Description:

An implementation of the American Society for Testing and Materials (ASTM) Standard E691 for interlaboratory testing procedures, designed for cross-platform genomic measurements. Given three (3) or more genomic platforms or laboratory protocols, this package provides interlaboratory testing procedures giving per-locus comparisons for sensitivity and precision between platforms.

r-cmip6visr 1.0.0
Propagated dependencies: r-terra@1.8-86 r-stringr@1.6.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/TycheLab/CMIP6VisR
Licenses: GPL 3
Build system: r
Synopsis: Visualization and Analysis of Coupled Model Intercomparison Project, Phase-6 (CMIP6) Hydroclimatic Data
Description:

Data manipulation for Coupled Model Intercomparison Project, Phase-6 (CMIP6) hydroclimatic data. The files are archived in the Federated Research Data Repository (FRDR) (Rajulapati et al, 2024, <doi:10.20383/103.0829>). The data set is described in Abdelmoaty et al. (2025, <doi:10.1038/s41597-025-04396-z>).

r-closeloop 0.1.0
Propagated dependencies: r-combinat@0.0-8
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/heorlytics/closeloop
Licenses: Expat
Build system: r
Synopsis: Integrate Single-Arm Observational Data in Network Meta Analysis
Description:

Calculate the distance between single-arm observational studies using covariate information to remove heterogeneity in Network Meta-Analysis (NMA) of randomized clinical trials. Facilitate the inclusion of observational data in NMA, enhancing the comprehensiveness and robustness of comparative effectiveness research. Schmitz (2018) <doi:10.1186/s12874-018-0509-7>.

r-cpgfilter 1.1
Propagated dependencies: r-matrixstats@1.5.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=CpGFilter
Licenses: GPL 3
Build system: r
Synopsis: CpG Filtering Method Based on Intra-Class Correlation Coefficients
Description:

Filter CpGs based on Intra-class Correlation Coefficients (ICCs) when replicates are available. ICCs are calculated by fitting linear mixed effects models to all samples including the un-replicated samples. Including the large number of un-replicated samples improves ICC estimates dramatically. The method accommodates any replicate design.

r-dclusterm 1.0-2
Propagated dependencies: r-xts@0.14.1 r-spacetime@1.3-3 r-sp@2.2-0 r-lme4@1.1-37 r-dcluster@0.2-10
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DClusterm
Licenses: GPL 3
Build system: r
Synopsis: Model-Based Detection of Disease Clusters
Description:

Model-based methods for the detection of disease clusters using GLMs, GLMMs and zero-inflated models. These methods are described in V. Gómez-Rubio et al. (2019) <doi:10.18637/jss.v090.i14> and V. Gómez-Rubio et al. (2018) <doi:10.1007/978-3-030-01584-8_1>.

r-distcrete 1.0.3
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/reconhub/distcrete
Licenses: Expat
Build system: r
Synopsis: Discrete Distribution Approximations
Description:

This package creates discretised versions of continuous distribution functions by mapping continuous values to an underlying discrete grid, based on a (uniform) frequency of discretisation, a valid discretisation point, and an integration range. For a review of discretisation methods, see Chakraborty (2015) <doi:10.1186/s40488-015-0028-6>.

r-earthtide 0.1.7
Propagated dependencies: r-rcppthread@2.2.0 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-r6@2.6.1
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/jkennel/earthtide
Licenses: GPL 3
Build system: r
Synopsis: Parallel Implementation of 'ETERNA 3.40' for Prediction and Analysis of Earth Tides
Description:

This is a port of Fortran ETERNA 3.4 <http://igets.u-strasbg.fr/soft_and_tool.php> by H.G. Wenzel for calculating synthetic Earth tides using the Hartmann and Wenzel (1994) <doi:10.1029/95GL03324> or Kudryavtsev (2004) <doi:10.1007/s00190-003-0361-2> tidal catalogs.

r-edwards97 0.1.1
Propagated dependencies: r-withr@3.0.2 r-tibble@3.3.0 r-rlang@1.1.6 r-glue@1.8.0 r-cli@3.6.5 r-broom@1.0.10
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://paleolimbot.github.io/edwards97/
Licenses: GPL 3
Build system: r
Synopsis: Langmuir Semi-Empirical Coagulation Model
Description:

This package implements the Edwards (1997) <doi:10.1002/j.1551-8833.1997.tb08229.x> Langmuir-based semi-empirical coagulation model, which predicts the concentration of organic carbon remaining in water after treatment with an Al- or Fe-based coagulant. Data and methods are provided to optimise empirical coefficients.

r-faoutlier 0.7.7
Propagated dependencies: r-sem@3.1-16 r-pbapply@1.7-4 r-mvtnorm@1.3-3 r-mirt@1.45.1 r-mass@7.3-65 r-lavaan@0.6-20 r-lattice@0.22-7
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://github.com/philchalmers/faoutlier
Licenses: GPL 2+
Build system: r
Synopsis: Influential Case Detection Methods for Factor Analysis and Structural Equation Models
Description:

This package provides tools for detecting and summarize influential cases that can affect exploratory and confirmatory factor analysis models as well as structural equation models more generally (Chalmers, 2015, <doi:10.1177/0146621615597894>; Flora, D. B., LaBrish, C. & Chalmers, R. P., 2012, <doi:10.3389/fpsyg.2012.00055>).

r-geomander 2.5.2
Propagated dependencies: r-tinytiger@0.0.11 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-sf@1.0-23 r-rlang@1.1.6 r-readr@2.1.6 r-rcpp@1.1.0 r-ggplot2@4.0.1 r-geos@0.2.4 r-dplyr@1.1.4 r-dataverse@0.3.16 r-cli@3.6.5 r-censable@0.0.8 r-baf@0.0.4
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://christophertkenny.com/geomander/
Licenses: FSDG-compatible
Build system: r
Synopsis: Geographic Tools for Studying Gerrymandering
Description:

This package provides a compilation of tools to complete common tasks for studying gerrymandering. This focuses on the geographic tool side of common problems, such as linking different levels of spatial units or estimating how to break up units. Functions exist for creating redistricting-focused data for the US.

r-glmmlasso 1.6.4
Propagated dependencies: r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-minqa@1.2.8 r-matrix@1.7-4
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=glmmLasso
Licenses: GPL 2
Build system: r
Synopsis: Variable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation
Description:

This package provides a variable selection approach for generalized linear mixed models by L1-penalized estimation is provided, see Groll and Tutz (2014) <doi:10.1007/s11222-012-9359-z>. See also Groll and Tutz (2017) <doi:10.1007/s10985-016-9359-y> for discrete survival models including heterogeneity.

r-happytime 0.1.0
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=happytime
Licenses: GPL 2
Build system: r
Synopsis: Two Games to Relieve the Boredom
Description:

There are two interesting games in this package, one is 2048 games(for windows), using up and down to control the direction until there is a 2048 figure. And the other is what to eat today',preparing for people who choose difficulties, including most of the delicious Cantonese cuisine.

r-influxdbr 0.14.2
Propagated dependencies: r-zoo@1.8-14 r-xts@0.14.1 r-tidyr@1.3.1 r-tibble@3.3.0 r-rlang@1.1.6 r-purrr@1.2.0 r-magrittr@2.0.4 r-jsonlite@2.0.0 r-httr@1.4.7 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://github.com/dleutnant/influxdbr
Licenses: GPL 3
Build system: r
Synopsis: R Interface to InfluxDB
Description:

An R interface to the InfluxDB time series database <https://www.influxdata.com>. This package allows you to fetch and write time series data from/to an InfluxDB server. Additionally, handy wrappers for the Influx Query Language (IQL) to manage and explore a remote database are provided.

r-localboot 0.9.2
Propagated dependencies: r-viridis@0.6.5 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=localboot
Licenses: GPL 3
Build system: r
Synopsis: Local Bootstrap Methods for Various Networks
Description:

Network analysis usually requires estimating the uncertainty of graph statistics. Through this package, we provide tools to bootstrap various networks via local bootstrap procedure. Additionally, it includes functions for generating probability matrices, creating network adjacency matrices from probability matrices, and plotting network structures. The reference will be updated soon.

r-lingmatch 1.0.7
Propagated dependencies: r-rcppparallel@5.1.11-1 r-rcpp@1.1.0 r-matrix@1.7-4 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://miserman.github.io/lingmatch/
Licenses: GPL 2+
Build system: r
Synopsis: Linguistic Matching and Accommodation
Description:

Measure similarity between texts. Offers a variety of processing tools and similarity metrics to facilitate flexible representation of texts and matching. Implements forms of Language Style Matching (Ireland & Pennebaker, 2010) <doi:10.1037/a0020386> and Latent Semantic Analysis (Landauer & Dumais, 1997) <doi:10.1037/0033-295X.104.2.211>.

r-matrixset 0.4.1
Propagated dependencies: r-vctrs@0.6.5 r-tidyselect@1.2.1 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-rlang@1.1.6 r-rcpp@1.1.0 r-r6@2.6.1 r-purrr@1.2.0 r-pillar@1.11.1 r-matrix@1.7-4 r-lifecycle@1.0.4 r-dplyr@1.1.4 r-crayon@1.5.3 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/pascalcroteau/matrixset
Licenses: Expat
Build system: r
Synopsis: Creating, Manipulating and Annotating Matrix Ensemble
Description:

This package creates an object that stores a matrix ensemble, matrices that share the same common properties, where rows and columns can be annotated. Matrices must have the same dimension and dimnames. Operators to manipulate these objects are provided as well as mechanisms to apply functions to these objects.

r-numbersbr 0.0.2
Propagated dependencies: r-stringr@1.6.0
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://cran.r-project.org/package=numbersBR
Licenses: Expat
Build system: r
Synopsis: Validate, Compare and Format Identification Numbers from Brazil
Description:

Validate, format and compare identification numbers used in Brazil. These numbers are used to identify individuals (CPF), vehicles (RENAVAN), companies (CNPJ) and etc. Functions to format, validate and compare these numbers have been implemented in a vectorized way in order to speed up validations and comparisons in big datasets.

r-notionapi 0.1.0
Propagated dependencies: r-rlang@1.1.6 r-r6@2.6.1 r-jsonlite@2.0.0 r-httr2@1.2.1 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://brenwin1.github.io/notionapi/
Licenses: Expat
Build system: r
Synopsis: Client for the 'Notion API'
Description:

Enable programmatic interaction with Notion pages, databases, blocks, comments, and users through the Notion API <https://developers.notion.com/>. Provides both synchronous and asynchronous client interfaces for building workflows and automations that integrate with Notion workspaces. Supports all Notion API endpoints including content creation, data retrieval, and workspace management.

r-occupancy 1.2
Propagated dependencies: r-matrixstats@1.5.0
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=occupancy
Licenses: Expat
Build system: r
Synopsis: Probability Functions for Occupancy Distributions
Description:

The classical and extended occupancy distributions occur in cases where balls are randomly allocated to bins. The PDF, CDF, quantile functions, generation of random variates, and calculating the first four central moments of the distributions are implemented as described in Oâ Neill (2019) <doi:10.1080/00031305.2019.1699445>.

r-pnadcibge 0.7.5
Propagated dependencies: r-timedate@4051.111 r-tibble@3.3.0 r-survey@4.4-8 r-readxl@1.4.5 r-readr@2.1.6 r-rcurl@1.98-1.17 r-projmgr@0.1.2 r-magrittr@2.0.4 r-httr@1.4.7 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PNADcIBGE
Licenses: GPL 3
Build system: r
Synopsis: Downloading, Reading and Analyzing PNADC Microdata
Description:

This package provides tools for downloading, reading and analyzing the Continuous National Household Sample Survey - PNADC, a household survey from Brazilian Institute of Geography and Statistics - IBGE. The data must be downloaded from the official website <https://www.ibge.gov.br/>. Further analysis must be made using package survey'.

r-petrinetr 0.3.0
Propagated dependencies: r-xml2@1.5.0 r-visnetwork@2.1.4 r-purrr@1.2.0 r-lifecycle@1.0.4 r-dplyr@1.1.4 r-diagrammer@1.0.11
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://bupar.net
Licenses: GPL 3
Build system: r
Synopsis: Building, Visualizing, Exporting and Replaying Petri Nets
Description:

This package provides functions for the construction of Petri Nets. Petri Nets can be replayed by firing enabled transitions. Silent transitions will be hidden by the execution handler. Also includes functionalities for the visualization of Petri Nets and export of Petri Nets to PNML (Petri Net Markup Language) files.

r-spatialnp 1.1-6
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SpatialNP
Licenses: GPL 2
Build system: r
Synopsis: Multivariate Nonparametric Methods Based on Spatial Signs and Ranks
Description:

Test and estimates of location, tests of independence, tests of sphericity and several estimates of shape all based on spatial signs, symmetrized signs, ranks and signed ranks. For details, see Oja and Randles (2004) <doi:10.1214/088342304000000558> and Oja (2010) <doi:10.1007/978-1-4419-0468-3>.

r-statconfr 0.2.1
Propagated dependencies: r-rmisc@1.5.1 r-plyr@1.8.9 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/ManuelRausch/StatConfR
Licenses: GPL 3+
Build system: r
Synopsis: Models of Decision Confidence and Measures of Metacognition
Description:

This package provides fitting functions and other tools for decision confidence and metacognition researchers, including meta-d'/d', often considered to be the gold standard to measure metacognitive efficiency, and information-theoretic measures of metacognition. Also allows to fit and compare several static models of decision making and confidence.

r-sqlrender 1.19.4
Dependencies: openjdk@25
Propagated dependencies: r-rlang@1.1.6 r-rjava@1.0-11 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://ohdsi.github.io/SqlRender/
Licenses: ASL 2.0
Build system: r
Synopsis: Rendering Parameterized SQL and Translation to Dialects
Description:

This package provides a rendering tool for parameterized SQL that also translates into different SQL dialects. These dialects include Microsoft SQL Server', Oracle', PostgreSql', Amazon RedShift', Apache Impala', IBM Netezza', Google BigQuery', Microsoft PDW', Snowflake', Azure Synapse Analytics Dedicated', Apache Spark', SQLite', and InterSystems IRIS'.

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