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erlang-relx 4.9.0
Propagated dependencies: erlang-bbmustache@1.12.2
Channel: guix
Location: gnu/packages/erlang.scm (gnu packages erlang)
Home page: https://erlware.github.io/relx/
Licenses: ASL 2.0
Synopsis: Release assembler for Erlang/OTP Releases
Description:

Relx assembles releases for an Erlang/OTP release. Given a release specification and a list of directories in which to search for OTP applications it will generate a release output. That output depends heavily on what plugins available and what options are defined, but usually it is simply a well configured release directory.

r-featseekr 1.10.0
Propagated dependencies: r-summarizedexperiment@1.40.0 r-pracma@2.4.6 r-pheatmap@1.0.13 r-mass@7.3-65
Channel: guix-bioc
Location: guix-bioc/packages/f.scm (guix-bioc packages f)
Home page: https://github.com/tcapraz/FeatSeekR
Licenses: GPL 3
Synopsis: FeatSeekR an R package for unsupervised feature selection
Description:

FeatSeekR performs unsupervised feature selection using replicated measurements. It iteratively selects features with the highest reproducibility across replicates, after projecting out those dimensions from the data that are spanned by the previously selected features. The selected a set of features has a high replicate reproducibility and a high degree of uniqueness.

r-fabiadata 1.48.0
Propagated dependencies: r-biobase@2.70.0
Channel: guix-bioc
Location: guix-bioc/packages/f.scm (guix-bioc packages f)
Home page: http://www.bioinf.jku.at/software/fabia/fabia.html
Licenses: LGPL 2.1+
Synopsis: Data sets for FABIA (Factor Analysis for Bicluster Acquisition)
Description:

Supplying gene expression data sets for the demos of the biclustering method "Factor Analysis for Bicluster Acquisition" (FABIA). The following three data sets are provided: A) breast cancer (van't Veer, Nature, 2002), B) multiple tissues (Su, PNAS, 2002), and C) diffuse large-B-cell lymphoma (Rosenwald, N Engl J Med, 2002).

r-geneplast 1.36.0
Propagated dependencies: r-snow@0.4-4 r-igraph@2.2.1 r-data-table@1.17.8 r-ape@5.8-1
Channel: guix-bioc
Location: guix-bioc/packages/g.scm (guix-bioc packages g)
Home page: https://bioconductor.org/packages/geneplast
Licenses: GPL 2+
Synopsis: Evolutionary and plasticity analysis of orthologous groups
Description:

Geneplast is designed for evolutionary and plasticity analysis based on orthologous groups distribution in a given species tree. It uses Shannon information theory and orthologs abundance to estimate the Evolutionary Plasticity Index. Additionally, it implements the Bridge algorithm to determine the evolutionary root of a given gene based on its orthologs distribution.

r-adapttest 1.2
Propagated dependencies: r-lattice@0.22-7
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=adaptTest
Licenses: GPL 2+
Synopsis: Adaptive Two-Stage Tests
Description:

The functions defined in this program serve for implementing adaptive two-stage tests. Currently, four tests are included: Bauer and Koehne (1994), Lehmacher and Wassmer (1999), Vandemeulebroecke (2006), and the horizontal conditional error function. User-defined tests can also be implemented. Reference: Vandemeulebroecke, An investigation of two-stage tests, Statistica Sinica 2006.

r-assistant 1.4.3
Propagated dependencies: r-r6@2.6.1 r-mvtnorm@1.3-3 r-magrittr@2.0.4 r-knitr@1.50 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/bnaras/ASSISTant
Licenses: GPL 2+
Synopsis: Adaptive Subgroup Selection in Group Sequential Trials
Description:

Clinical trial design for subgroup selection in three-stage group sequential trial as described in Lai, Lavori and Liao (2014, <doi:10.1016/j.cct.2014.09.001>). Includes facilities for design, exploration and analysis of such trials. An implementation of the initial DEFUSE-3 trial is also provided as a vignette.

r-biobricks 0.2.2
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=biobricks
Licenses: Expat
Synopsis: Access Data Dependencies Installed Through 'Biobricks.ai'
Description:

This package provides an integrated data management solution for assets installed via the Biobricks.ai platform. Streamlines the process of loading and interacting with diverse datasets in a consistent manner. A list of bricks is available at <https://status.biobricks.ai>. Documentation for Biobricks.ai is available at <https://docs.biobricks.ai>.

r-babytimer 0.1.0
Propagated dependencies: r-stringr@1.6.0 r-snakecase@0.11.1 r-readr@2.1.6 r-lubridate@1.9.4 r-janitor@2.2.1 r-glue@1.8.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=babyTimeR
Licenses: Expat
Synopsis: Parse Output from 'BabyTime' Application
Description:

BabyTime is an application for tracking infant and toddler care activities like sleeping, eating, etc. This package will take the outputted .zip files and parse it into a usable list object with cleaned data. It handles malformed and incomplete data gracefully and is designed to parse one directory at a time.

r-clptheory 0.1.0
Propagated dependencies: r-popdemo@1.3-2 r-magrittr@2.0.4 r-dplyr@1.1.4 r-car@3.1-3
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/dbasu-umass/clptheory/
Licenses: Expat
Synopsis: Compute Price of Production and Labor Values
Description:

Computes the uniform rate of profit, the vector of price of production and the vector of labor values; and also compute measures of deviation between relative prices of production and relative values. <https://scholarworks.umass.edu/econ_workingpaper/347/>. You provide the input-output data and clptheory does the calculations for you.

r-flightsbr 1.1.1
Propagated dependencies: r-rvest@1.0.5 r-pbapply@1.7-4 r-parzer@0.4.4 r-lifecycle@1.0.4 r-janitor@2.2.1 r-fs@1.6.6 r-data-table@1.17.8 r-curl@7.0.0 r-archive@1.1.12
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://github.com/ipeaGIT/flightsbr
Licenses: Expat
Synopsis: Download Flight and Airport Data from Brazil
Description:

Download flight and airport data from Brazilâ s Civil Aviation Agency (ANAC) <https://www.gov.br/anac/pt-br>. The data covers detailed information on aircraft, airports, and airport operations registered with ANAC. It also includes data on airfares, all international flights to and from Brazil, and domestic flights within the country.

r-gitgadget 0.8.2
Propagated dependencies: r-usethis@3.2.1 r-shinyfiles@0.9.3 r-shiny@1.11.1 r-rstudioapi@0.17.1 r-miniui@0.1.2 r-markdown@2.0 r-jsonlite@2.0.0 r-dplyr@1.1.4 r-curl@7.0.0 r-callr@3.7.6
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://github.com/vnijs/gitgadget
Licenses: GPL 3
Synopsis: 'Rstudio' Addin for Version Control and Assignment Management using Git
Description:

An Rstudio addin for version control that allows users to clone repositories, create and delete branches, and sync forks on GitHub, GitLab, etc. Furthermore, the addin uses the GitLab API to allow instructors to create forks and merge requests for all students/teams with one click of a button.

r-ggdemetra 0.2.9
Dependencies: openjdk@25
Propagated dependencies: r-rjdemetra@0.2.8 r-gridextra@2.3 r-ggrepel@0.9.6 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://aqlt.github.io/ggdemetra/
Licenses: FSDG-compatible
Synopsis: 'ggplot2' Extension for Seasonal and Trading Day Adjustment with 'RJDemetra'
Description:

This package provides ggplot2 functions to return the results of seasonal and trading day adjustment made by RJDemetra'. RJDemetra is an R interface around JDemetra+ (<https://github.com/jdemetra/jdemetra-app>), the seasonal adjustment software officially recommended to the members of the European Statistical System and the European System of Central Banks.

r-hchinamap 0.1.0
Propagated dependencies: r-htmlwidgets@1.6.4
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/czxa/hchinamap
Licenses: Expat
Synopsis: Mapping China and Its Provinces
Description:

By binding R functions and the Highmaps <https://www.highcharts.com.cn/products/highmaps> chart library, hchinamap package provides a simple way to map China and its provinces. The map of China drawn by this package contains complete Chinese territory, especially the Nine-dotted line, South Tibet, Hong Kong, Macao and Taiwan.

r-ideatools 3.5.2
Propagated dependencies: r-tibble@3.3.0 r-stringi@1.8.7 r-shiny@1.11.1 r-rmarkdown@2.30 r-rlang@1.1.6 r-readxl@1.4.5 r-pdftools@3.6.0 r-openxlsx@4.2.8.1 r-jsonlite@2.0.0 r-ggtext@0.1.2 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-ggimage@0.3.4 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://davidcarayon.github.io/IDEATools/index.html
Licenses: GPL 3
Synopsis: Individual and Group Farm Sustainability Assessments using the IDEA4 Method
Description:

Collection of tools to automate the processing of data collected though the IDEA4 method (see Zahm et al. (2018) <doi:10.1051/cagri/2019004> ). Starting from the original data collecting files this packages provides functions to compute IDEA indicators, draw modern and aesthetic plots, and produce a wide range of reporting materials.

r-idsl-ufax 1.9.1
Propagated dependencies: r-readxl@1.4.5 r-rcppalgos@2.9.3 r-idsl-ufa@2.0 r-idsl-ipa@2.9
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://github.com/idslme/idsl.ufax
Licenses: Expat
Synopsis: Exhaustive Chemical Enumeration for United Formula Annotation
Description:

This package provides a pipeline to annotate a number of peaks from the IDSL.IPA peaklists using an exhaustive chemical enumeration-based approach. This package can perform elemental composition calculations using the following 15 elements : C, B, Br, Cl, K, S, Si, N, H, As, F, I, Na, O, and P.

r-idsl-sufa 1.3
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://github.com/idslme/idsl.sufa
Licenses: Expat
Synopsis: Simplified UFA
Description:

This package provides a simplified version of the IDSL.UFA package to calculate isotopic profiles and adduct formulas from molecular formulas with no dependency on other R packages for online tools and educational mass spectrometry courses. The IDSL.SUFA package also provides an ancillary module to process user-defined adduct formulas.

r-markerpen 0.1.2
Propagated dependencies: r-rspectra@0.16-2 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=markerpen
Licenses: GPL 2+ GPL 3+
Synopsis: Marker Gene Detection via Penalized Principal Component Analysis
Description:

Implementation of the MarkerPen algorithm, short for marker gene detection via penalized principal component analysis, described in the paper by Qiu, Wang, Lei, and Roeder (2021, <doi:10.1093/bioinformatics/btab257>). MarkerPen is a semi-supervised algorithm for detecting marker genes by combining prior marker information with bulk transcriptome data.

r-matchingr 2.0.0
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/jtilly/matchingR/
Licenses: GPL 2+
Synopsis: Matching Algorithms in R and C++
Description:

Computes matching algorithms quickly using Rcpp. Implements the Gale-Shapley Algorithm to compute the stable matching for two-sided markets, such as the stable marriage problem and the college-admissions problem. Implements Irving's Algorithm for the stable roommate problem. Implements the top trading cycle algorithm for the indivisible goods trading problem.

r-medianews 0.2.1
Propagated dependencies: r-xml2@1.5.0 r-stopwords@2.3 r-rvest@1.0.5 r-lubridate@1.9.4
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=MediaNews
Licenses: LGPL 3
Synopsis: Media News Extraction for Text Analysis
Description:

Extract textual data from different media channels through its source based on users choice of keywords. These data can be used to perform text analysis to identify patterns in respective media reporting. The media channels used in this package are print media. The data (or news) used are publicly available to consumers.

r-nhsnumber 0.1.2
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://github.com/sellorm/nhsnumber
Licenses: Expat
Synopsis: Tools for Working with NHS Number Checksums
Description:

This package provides functions for working with NHS number checksums. The UK's National Health Service issues NHS numbers to all users of its services and this package implements functions for verifying that the numbers are valid according to the checksum scheme the NHS use. Numbers can be validated and checksums created.

r-prodenica 1.1
Propagated dependencies: r-gam@1.22-6
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://hastie.su.domains/ElemStatLearn/printings/ESLII_print12_toc.pdf
Licenses: GPL 2
Synopsis: Product Density Estimation for ICA using Tilted Gaussian Density Estimates
Description:

This package provides a direct and flexible method for estimating an ICA model. This approach estimates the densities for each component directly via a tilted Gaussian. The tilt functions are estimated via a GAM Poisson model. Details can be found in "Elements of Statistical Learning (2nd Edition)" in Section 14.7.4.

r-shinytime 1.0.3
Propagated dependencies: r-shiny@1.11.1 r-htmltools@0.5.8.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://burgerga.github.io/shinyTime/
Licenses: GPL 3 FSDG-compatible
Synopsis: Time Input Widget for Shiny
Description:

This package provides a time input widget for Shiny. This widget allows intuitive time input in the [hh]:[mm]:[ss] or [hh]:[mm] (24H) format by using a separate numeric input for each time component. The interface with R uses date-time objects. See the project page for more information and examples.

r-shinybody 0.1.3
Propagated dependencies: r-htmlwidgets@1.6.4 r-htmltools@0.5.8.1 r-crosstalk@1.2.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/robert-norberg/shinybody
Licenses: Expat
Synopsis: An Interactive Anatomography Widget for 'shiny'
Description:

An htmlwidget of the human body that allows you to hide/show and assign colors to 79 different body parts. The human widget is an htmlwidget', so it works in Quarto documents, R Markdown documents, or any other HTML medium. It also functions as an input/output widget in a shiny app.

r-sixtyfour 0.2.0
Propagated dependencies: r-withr@3.0.2 r-uuid@1.2-1 r-tidyr@1.3.1 r-tibble@3.3.0 r-s3fs@0.1.7 r-rlang@1.1.6 r-purrr@1.2.0 r-paws-common@0.8.7 r-paws@0.9.0 r-memoise@2.0.1 r-jsonlite@2.0.0 r-ipaddress@1.0.3 r-glue@1.8.0 r-fs@1.6.6 r-dplyr@1.1.4 r-curl@7.0.0 r-clipr@0.8.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/getwilds/sixtyfour
Licenses: Expat
Synopsis: Humane Interface to Amazon Web Services
Description:

An opinionated interface to Amazon Web Services <https://aws.amazon.com>, with functions for interacting with IAM (Identity and Access Management), S3 (Simple Storage Service), RDS (Relational Data Service), Redshift, and Billing. Lower level functions ('aws_ prefix) are for do it yourself workflows, while higher level functions ('six_ prefix) automate common tasks.

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