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r-rang 0.3.0
Propagated dependencies: r-vctrs@0.6.5 r-renv@1.1.5 r-remotes@2.5.0 r-pkgsearch@3.1.5 r-parsedate@1.3.2 r-memoise@2.0.1 r-jsonlite@2.0.0 r-httr@1.4.7 r-here@1.0.2 r-fastmap@1.2.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/gesistsa/rang
Licenses: GPL 3+
Build system: r
Synopsis: Reconstructing Reproducible R Computational Environments
Description:

Resolve the dependency graph of R packages at a specific time point based on the information from various R-hub web services <https://blog.r-hub.io/>. The dependency graph can then be used to reconstruct the R computational environment with Rocker <https://rocker-project.org>.

r-mlmm 0.1.0
Channel: gn-bioinformatics
Location: gn/packages/phewas.scm (gn packages phewas)
Home page: https://github.com/Gregor-Mendel-Institute/mlmm
Licenses: GPL 3
Build system: r
Synopsis: R/mlmm
Description:

Implements an efficient multi-locus mixed-model approach for genome-wide association studies in structured populations.

r-cner 1.46.0
Dependencies: zlib@1.3.1
Propagated dependencies: r-annotate@1.88.0 r-biocgenerics@0.56.0 r-biostrings@2.78.0 r-dbi@1.2.3 r-genomeinfodb@1.46.0 r-genomicalignments@1.46.0 r-genomicranges@1.62.0 r-ggplot2@4.0.1 r-go-db@3.22.0 r-iranges@2.44.0 r-keggrest@1.50.0 r-powerlaw@1.0.0 r-pwalign@1.6.0 r-r-utils@2.13.0 r-readr@2.1.6 r-reshape2@1.4.5 r-rsqlite@2.4.4 r-rtracklayer@1.70.0 r-s4vectors@0.48.0 r-seqinfo@1.0.0 r-xvector@0.50.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://github.com/ge11232002/CNEr
Licenses: GPL 2 non-copyleft
Build system: r
Synopsis: CNE Detection and Visualization
Description:

This package provides tools for large-scale identification and advanced visualization of sets of conserved noncoding elements.

r-msir 1.3.3
Propagated dependencies: r-mclust@6.1.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/msir
Licenses: GPL 2+
Build system: r
Synopsis: Model-based sliced inverse regression
Description:

This is an R package for dimension reduction based on finite Gaussian mixture modeling of inverse regression.

r-xkcd 0.1.0
Propagated dependencies: r-extrafont@0.20 r-ggplot2@4.0.1 r-hmisc@5.2-4 r-rlang@1.1.6
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/xkcd/
Licenses: GPL 3
Build system: r
Synopsis: Plot ggplot2 graphics in the XKCD style
Description:

This package provides the means to plot ggplot2 graphs in the style of the XKCD web comic.

r-expm 1.0-0
Propagated dependencies: r-matrix@1.7-4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://r-forge.r-project.org/projects/expm/
Licenses: GPL 2+
Build system: r
Synopsis: Tools for matrix exponentials and related quantities
Description:

This package provides tools for the computation of the matrix exponential, logarithm, square root, and related quantities.

r-ouch 2.20
Propagated dependencies: r-subplex@1.9
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://kingaa.github.io/ouch/
Licenses: GPL 2+
Build system: r
Synopsis: Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses
Description:

This package provides tools to fit and compare Ornstein-Uhlenbeck models for evolution along a phylogenetic tree.

r-untb 1.7-7-1
Propagated dependencies: r-brobdingnag@1.2-9 r-partitions@1.10-9 r-polynom@1.4-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/RobinHankin/untb.git
Licenses: GPL 2+
Build system: r
Synopsis: Ecological drift under the UNTB
Description:

This package provides numerical simulations, and visualizations, of Hubbell's Unified Neutral Theory of Biodiversity (UNTB).

r-ashr 2.2-63
Propagated dependencies: r-etrunct@0.1 r-invgamma@1.2 r-matrix@1.7-4 r-mixsqp@0.3-54 r-rcpp@1.1.0 r-squarem@2021.1 r-truncnorm@1.0-9
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/stephens999/ashr
Licenses: GPL 3+
Build system: r
Synopsis: Methods for adaptive shrinkage, using empirical bayes
Description:

This package implements an empirical Bayes approach for large-scale hypothesis testing and false discovery rate estimation.

r-gsar 1.44.0
Propagated dependencies: r-igraph@2.2.1
Channel: guix-bioc
Location: guix-bioc/packages/g.scm (guix-bioc packages g)
Home page: https://bioconductor.org/packages/GSAR
Licenses: FSDG-compatible
Build system: r
Synopsis: Gene Set Analysis in R
Description:

Gene set analysis using specific alternative hypotheses. Tests for differential expression, scale and net correlation structure.

r-msmb 1.28.0
Propagated dependencies: r-tibble@3.3.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/MSMB
Licenses: LGPL 2.0+
Build system: r
Synopsis: Data sets for the book 'Modern Statistics for Biology'
Description:

Data sets for the book Modern Statistics for Modern Biology', S.P. Holmes and W. Huber.

r-ader 1.5
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://www.paraninfo.es/catalogo/9788484768333/
Licenses: GPL 2+
Build system: r
Synopsis: Data Analysis in Ecology
Description:

Data sets used in Cayuela and De la Cruz (2022, ISBN:978-84-8476-833-3).

r-bvls 1.4
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bvls
Licenses: GPL 2+
Build system: r
Synopsis: The Stark-Parker algorithm for bounded-variable least squares
Description:

An R interface to the Stark-Parker implementation of an algorithm for bounded-variable least squares.

r-cego 2.4.4
Propagated dependencies: r-quadprog@1.5-8 r-matrix@1.7-4 r-mass@7.3-65 r-fastmatch@1.1-6 r-deoptim@2.2-8 r-anticlust@0.8.13
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=CEGO
Licenses: GPL 3+
Build system: r
Synopsis: Combinatorial Efficient Global Optimization
Description:

Model building, surrogate model based optimization and Efficient Global Optimization in combinatorial or mixed search spaces.

r-c3dr 0.2.0
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/ropensci/c3dr
Licenses: Expat
Build system: r
Synopsis: Read and Write C3D Motion Capture Files
Description:

This package provides a wrapper for the EZC3D library to work with C3D motion capture data.

r-deps 0.4.1
Propagated dependencies: r-renv@1.1.5 r-remotes@2.5.0 r-jsonlite@2.0.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://hub.analythium.io/deps/
Licenses: Expat
Build system: r
Synopsis: Dependency Management with 'roxygen'-Style Comments
Description:

Manage your source code dependencies by decorating your existing R code with special, roxygen'-style comments.

r-lacm 0.1.2
Propagated dependencies: r-statmod@1.5.1 r-numderiv@2016.8-1.1
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=lacm
Licenses: GPL 2+
Build system: r
Synopsis: Latent Autoregressive Count Models
Description:

Perform pairwise likelihood inference in latent autoregressive count models. See Pedeli and Varin (2020) for details.

r-link 2024.4.0
Propagated dependencies: r-xml2@1.5.0 r-stringr@1.6.0 r-rlang@1.1.6 r-knitr@1.50 r-httr2@1.2.1 r-htmltools@0.5.8.1 r-glue@1.8.0 r-downlit@0.4.5 r-bslib@0.9.0
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://link.tada.science/
Licenses: Expat
Build system: r
Synopsis: Hyperlink Automatic Detection
Description:

Automatic detection of hyperlinks for packages and calls in the text of rmarkdown or quarto documents.

r-onsr 1.0.2
Propagated dependencies: r-tibble@3.3.0 r-readr@2.1.6 r-jsonlite@2.0.0 r-httr@1.4.7
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://kvasilopoulos.github.io/onsr/
Licenses: GPL 3+
Build system: r
Synopsis: Client for the 'ONS' API
Description:

Client for the Office of National Statistics ('ONS') API <https://api.beta.ons.gov.uk/v1>.

r-pack 0.1-2
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pack
Licenses: GPL 3
Build system: r
Synopsis: Convert Values to/from Raw Vectors
Description:

This package provides functions to easily convert data to binary formats other programs/machines can understand.

r-qsub 1.1.3
Propagated dependencies: r-tidyr@1.3.1 r-stringr@1.6.0 r-ssh@0.9.4 r-readr@2.1.6 r-random@0.2.6 r-purrr@1.2.0 r-processx@3.8.6 r-pbapply@1.7-4 r-glue@1.8.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/q.scm (guix-cran packages q)
Home page: https://github.com/rcannood/qsub
Licenses: GPL 3
Build system: r
Synopsis: Running Commands Remotely on 'Gridengine' Clusters
Description:

Run lapply() calls in parallel by submitting them to gridengine clusters using the qsub command.

r-qmap 1.0-6
Propagated dependencies: r-fitdistrplus@1.2-4
Channel: guix-cran
Location: guix-cran/packages/q.scm (guix-cran packages q)
Home page: https://cran.r-project.org/package=qmap
Licenses: GPL 2+
Build system: r
Synopsis: Statistical Transformations for Post-Processing Climate Model Output
Description:

Empirical adjustment of the distribution of variables originating from (regional) climate model simulations using quantile mapping.

r-smss 1.0-2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=smss
Licenses: GPL 3
Build system: r
Synopsis: Datasets for Agresti and Finlay's "Statistical Methods for the Social Sciences"
Description:

Datasets used in "Statistical Methods for the Social Sciences" (SMSS) by Alan Agresti and Barbara Finlay.

r-synr 1.0.0
Propagated dependencies: r-ggplot2@4.0.1 r-dbscan@1.2.3 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://datalowe.github.io/synr/
Licenses: Expat
Build system: r
Synopsis: Explore and Process Synesthesia Consistency Test Data
Description:

Explore synesthesia consistency test data, calculate consistency scores, and classify participant data as valid or invalid.

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