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Optimal experimental designs for functional linear and functional generalised linear models, for scalar responses and profile/dynamic factors. The designs are optimised using the coordinate exchange algorithm. The methods are discussed by Michaelides (2023) <https://eprints.soton.ac.uk/474982/1/Thesis_DamianosMichaelides_Final_pdfa_1_.pdf>.
Wrapper functions around the Facebook Marketing API to create, read, update and delete custom audiences, images, campaigns, ad sets, ads and related content.
Enables high-dimensional penalized regression across heterogeneous subgroups. Fusion penalties are used to share information about the linear parameters across subgroups. The underlying model is described in detail in Dondelinger and Mukherjee (2017) <arXiv:1611.00953>.
This package provides a generative art system for producing tree-like images using an L-system to create the structures. The package includes tools for generating the data structures and visualise them in a variety of styles.
Compute maximum likelihood estimators of parameters in a Gaussian factor model using the the matrix-free methodology described in Dai et al. (2020) <doi:10.1080/10618600.2019.1704296>. In contrast to the factanal() function from stats package, fad() can handle high-dimensional datasets where number of variables exceed the sample size and is also substantially faster than the EM algorithms.
This package provides a game for two players: Who gets first four in a row (horizontal, vertical or diagonal) wins. As board game published by Milton Bradley, designed by Howard Wexler and Ned Strongin.
Bindings to libfluidsynth to parse and synthesize MIDI files. It can read MIDI into a data frame, play it on the local audio device, or convert into an audio file.
Functional clustering aims to group curves exhibiting similar temporal behaviour and to obtain representative curves summarising the typical dynamics within each cluster. A key challenge in this setting is class imbalance, where some clusters contain substantially more curves than others, which can adversely affect clustering performance. While class imbalance has been extensively studied in supervised classification, it has received comparatively little attention in unsupervised clustering. This package implements functional iterative hierarchical clustering ('funIHC'), an adaptation of the iterative hierarchical clustering method originally developed for multivariate data, to the functional data setting. For further details, please see Higgins and Carey (2024) <doi:10.1007/s11634-024-00611-8>.
Base maps are transformed to focus on a specific location using an azimuthal logarithmic distance transformation.
Easy way to plot regular/weighted/conditional distributions by using formulas. The core of the package concerns distribution plots which are automatic: the many options are tailored to the data at hand to offer the nicest and most meaningful graphs possible -- with no/minimum user input. Further provide functions to plot conditional trends and box plots. See <https://lrberge.github.io/fplot/> for more information.
This package provides functions for finding smooth interpolating curves connecting a series of points in the plane. Curves may be open or closed, that is, with the first and last point of the curve at the initial point.
Time-based joins to analyze sequence of events, both in memory and out of memory. after_join() joins two tables of events, while funnel_start() and funnel_step() join events in the same table. With the type argument, you can switch between different funnel types, like first-first and last-firstafter.
Routines for model-based functional cluster analysis for functional data with optional covariates. The idea is to cluster functional subjects (often called functional objects) into homogenous groups by using spline smoothers (for functional data) together with scalar covariates. The spline coefficients and the covariates are modelled as a multivariate Gaussian mixture model, where the number of mixtures corresponds to the number of clusters. The parameters of the model are estimated by maximizing the observed mixture likelihood via an EM algorithm (Arnqvist and Sjöstedt de Luna, 2019) <doi:10.48550/arXiv.1904.10265>. The clustering method is used to analyze annual lake sediment from lake Kassjön (Northern Sweden) which cover more than 6400 years and can be seen as historical records of weather and climate.
Stores large arrays in files to avoid occupying large memories. Implemented with super fast gigabyte-level multi-threaded reading/writing via OpenMP'. Supports multiple non-character data types (double, float, complex, integer, logical, and raw).
Several generalized / directional Fixed Sequence Multiple Testing Procedures (FSMTPs) are developed for testing a sequence of pre-ordered hypotheses while controlling the FWER, FDR and Directional Error (mdFWER). All three FWER controlling generalized FSMTPs are designed under arbitrary dependence, which allow any number of acceptances. Two FDR controlling generalized FSMTPs are respectively designed under arbitrary dependence and independence, which allow more but a given number of acceptances. Two mdFWER controlling directional FSMTPs are respectively designed under arbitrary dependence and independence, which can also make directional decisions based on the signs of the test statistics. The main functions for each proposed generalized / directional FSMTPs are designed to calculate adjusted p-values and critical values, respectively. For users convenience, the functions also provide the output option for printing decision rules.
This package implements a novel approach for measuring feature importance in k-means clustering. Importance of a feature is measured by the misclassification rate relative to the baseline cluster assignment due to a random permutation of feature values. An explanation of permutation feature importance in general can be found here: <https://christophm.github.io/interpretable-ml-book/feature-importance.html>.
This package provides a tidy R interface for count time series analysis. It includes implementation of the INGARCH (Integer Generalized Autoregressive Conditional Heteroskedasticity) model from the tscount package and the GLARMA (Generalized Linear Autoregressive Moving Averages) model from the glarma package. Additionally, it offers automated parameter selection algorithms based on the minimization of a penalized likelihood.
The complete scripts from the American sitcom Friends in tibble format. Use this package to practice data wrangling, text analysis and network analysis.
This package provides functions for selecting attributes from a given dataset. Attribute subset selection is the process of identifying and removing as much of the irrelevant and redundant information as possible.
The fxl Charting package is used to prepare and design single case design figures that are typically prepared in spreadsheet software. With fxl', there is no need to leave the R environment to prepare these works and many of the more unique conventions in single case experimental designs can be performed without the need for physically constructing features of plots (e.g., drawing annotations across plots). Support is provided for various different plotting arrangements (e.g., multiple baseline), annotations (e.g., brackets, arrows), and output formats (e.g., svg, rasters).
Estimates the first-exposure effect (FEE) using a one-inflated positive Poisson model, or a one-inflated zero-truncated negative binomial model. In addition, estimates the marginal FEE, and standard errors for the FEE and marginal FEE.
This package provides a collection of four datasets based around the population dynamics of migratory fish. Datasets contain both basic size information on a per fish basis, as well as otolith data that contains a per day record of fish growth history. All data in this package was collected by the author, from 2015-2016, in the Wellington region of New Zealand.
This package provides a selection of 3 different inference rules (including additionally the clamped types of the referred inference rules) and 4 threshold functions in order to obtain the inference of the FCM (Fuzzy Cognitive Map). Moreover, the fcm package returns a data frame of the concepts values of each state after the inference procedure. Fuzzy cognitive maps were introduced by Kosko (1986) <doi:10.1002/int.4550010405> providing ideal causal cognition tools for modeling and simulating dynamic systems.
For including external figures into an assembled patchwork. This enables the creation of more complex figures that include images alongside plots.