This package provides a common interface to specifying clustering models, in the same style as parsnip'. Creates unified interface across different functions and computational engines.
Image feature data and analysis codes for the Guglielmi, Barry et al. paper describing the application of an optogenetics tools to disrupt Drosophila embryo furrowing.
Define utilities for exploration of human metabolome database, including functions to retrieve specific metabolite entries and data snapshots with pairwise associations (metabolite-gene,-protein,-disease).
Arrow2 is a Rust library to work with the Arrow format. It is a re-write of the official Arrow crate using transmute-free operations.
Allows flashing of Rockchip based embedded linux devices. The list of currently supported devices is: RK2818, RK2918, RK2928, RK3026, RK3036, RK3066, RK312X, RK3168, RK3188, RK3288, RK3368.
File Roller is an archive manager for the GNOME desktop environment that allows users to view, unpack, and create compressed archives such as gzip tarballs.
This package contains an implementation of RFC 2388, which is used to process form data posted with HTTP POST method using enctype "multipart/form-data".
Collections of accessor functions and patterns to access the elements in compound type specifier, e.g. dimensions
in (array element-type dimensions)
This package provides support for iterators, which allow a programmer to traverse through all the elements of a vector, list, or other collection of data.
Analyze recurrent events with right-censored data and the potential presence of a terminal event (that prevents further occurrences, like death). recofest extends the random survival forest algorithm, adapting splitting rules and node estimators to handle complexities of recurrent events. The methodology is fully described in Murris, J., Bouaziz, O., Jakubczak, M., Katsahian, S., & Lavenu, A. (2024) (<https://hal.science/hal-04612431v1/document>).
This package provides a collection of functions for interpretation and presentation of regression analysis. These functions are used to produce the statistics lectures in http://pj.freefaculty.org/guides. The package includes regression diagnostics, regression tables, and plots of interactions and "moderator" variables. The emphasis is on "mean-centered" and "residual-centered" predictors. The vignette rockchalk
offers a fairly comprehensive overview.
Flexible framework for trait-based simulation of community assembly, where components could be replaced by user-defined function and that allows variation of traits within species.
The cov.nnve()
function implements robust covariance estimation by the nearest neighbor variance estimation (NNVE) method of Wang and Raftery (2002) <DOI:10.1198/016214502388618780>.
This package provides tools for clustering high-dimensional data. In particular, it contains the methods described in <doi:10.1093/bioinformatics/btaa243>, <arXiv:2010.00950>
.
Extends the functionality of base R lists and provides specialized data structures deque', set', dict', and dict.table', the latter to extend the data.table package.
Metabarcoding analysis using the DBTC package is implemented here using shiny in an interactive graphical user interface to conduct Metabarcode analyses and visualize and filter results.
Compares two dataframes with a common key and returns the delta records. The package will return three dataframes that contain the added, changed, and deleted records.
Tests the equality of two covariance matrices, used in paper "Two sample tests for high dimensional covariance matrices." Li and Chen (2012) <arXiv:1206.0917>
.
Generate SPSS'/'SAS styled frequency tables. Frequency tables are generated with variable and value label attributes where applicable with optional html output to quickly examine datasets.
Data sets exemplifying statistical methods, and some facilitatory utility functions used in ``Analyzing Linguistic Data: A practical introduction to statistics using R'', Cambridge University Press, 2008.
Crabs in the English channel, deer skulls, English monarchs, half-caste Manga characters, Jamaican cities, Shakespeare's The Tempest, drugged up cyclists and sexually transmitted diseases.
This package provides a flexible approach, inspired by cosinor regression, for differential analysis of rhythmic transcriptome data. See Singer and Hughey (2018) <doi:10.1177/0748730418813785>.
This package provides a simple method for centering and scaling of numeric data. Certain columns or rows can be ignored when normalizing or be normalized jointly.
Interfaces and methods for variable selection in Partial Least Squares. The methods include filter methods, wrapper methods and embedded methods. Both regression and classification is supported.