Search and download data from the API for Japanese Diet Proceedings (see the reference at <https://kokkai.ndl.go.jp/api.html>).
This package implements a data language engine for incorporating data directly in rmarkdown documents so that they can be made completely standalone.
Datasets for the fourth edition of "Statistics: Unlocking the Power of Data" by Lock^5 Includes versions of datasets from earlier editions.
This package provides an RStudio extension with a chat interface for an AI coding agent to help users with R programming tasks.
This package provides classes and calculation and plotting functions for metrology applications, including measurement uncertainty estimation and inter-laboratory metrology comparison studies.
Utilities and kinship information for behavior genetics and developmental research using the National Longitudinal Survey of Youth (NLSY; <https://www.nlsinfo.org/>).
Miscellaneous small utilities are provided to mitigate issues with messy, inconsistent or high dimensional data and help for preprocessing and preparing analyses.
We extend dplyr and fuzzyjoin join functions with features to preprocess the data, apply various data checks, and deal with conflicting columns.
Data and analysis from an experiment with improving touch typing speed, using the tDCS PlatoWork headset produced by PlatoScience.
This package provides functions and datasets to accompany J. Albert and J. Hu, "Probability and Bayesian Modeling", CRC Press, (2019, ISBN: 1138492566).
Upload raster data and easily create interactive quantitative risk analysis QRA visualizations. Select from numerous color palettes, base-maps, and different configurations.
Generate and translate standard Universally Unique Identifiers (UUIDs) into shorter - or just different - formats and back. Also implements base58 encoders and decoders.
This package provides a teal_data class as a unified data model for teal applications focusing on reproducibility and relational data.
Create publication quality plots and tables for Item Response Theory and Classical Test theory based item analysis, exploratory and confirmatory factor analysis.
This package provides a toolkit for microarray and RNA-seq data analysis, including annotation conversion, differential expression, enrichment, survival analysis, and visualization.
Easily plot heat maps of the world, based on continuous or categorical data. Country labels can also be added to the map.
This package provides an RNA-seq workflow for differential transcript usage (DTU) following Salmon quantification. This workflow performs a DTU analysis on simulated data. It also shows how to use stageR to perform two-stage testing of DTU, a statistical framework to screen at the gene level and then confirm which transcripts within the significant genes show evidence of DTU.
Measure single-storage water supply system performance using resilience, reliability, and vulnerability metrics; assess storage-yield-reliability relationships; determine no-fail storage with sequent peak analysis; optimize release decisions for water supply, hydropower, and multi-objective reservoirs using deterministic and stochastic dynamic programming; generate inflow replicates using parametric and non-parametric models; evaluate inflow persistence using the Hurst coefficient.
Interface to JDemetra+ 3.x (<https://github.com/jdemetra>) time series analysis software. It provides a variety of methods for temporal disaggregation & interpolation, benchmarking, reconciliation and calendarization. It incorporates statistical methods described in the latest European Statistical System (ESS) guidelines on temporal disaggregation, benchmarking, and reconciliation (2018 edition). The package implements highly efficient algorithms for fast and reliable computation.
Rasterize images using a 3D software renderer. 3D scenes are created either by importing external files, building scenes out of the included objects, or by constructing meshes manually. Supports point and directional lights, anti-aliased lines, shadow mapping, transparent objects, translucent objects, multiple materials types, reflection, refraction, environment maps, multicore rendering, bloom, tone-mapping, and screen-space ambient occlusion.
This package implements the Amino Acid Annotation (A3) format using S7 classes. The A3 format is a structured schema for annotating amino acid sequences with site, region, post-translational modification (PTM), processing event, and variant information. Provides functions to create, read, and write A3 objects, and to import annotations from UniProt', AlphaFold', PDBe', ClinVar', and Ensembl'.
This package provides a programmatic interface to FishBase', re-written based on an accompanying RESTful API. Access tables describing over 30,000 species of fish, their biology, ecology, morphology, and more. This package also supports experimental access to SeaLifeBase data, which contains nearly 200,000 species records for all types of aquatic life not covered by FishBase.'.
Reads river network shape files and computes network distances. Also included are a variety of computation and graphical tools designed for fisheries telemetry research, such as minimum home range, kernel density estimation, and clustering analysis using empirical k-functions with a bootstrap envelope. Tools are also provided for editing the river networks, meaning there is no reliance on external software.
The biobtreeR package provides an interface to biobtree, a tool which covers large sets of bioinformatics datasets and allows search and chain mappings functionalities.