This package provides the means to plot ggplot2 graphs in the style of the XKCD web comic.

Assists in the manipulation and processing of linear features with the help of the sf package. Makes use of linear referencing to extract data from most shape files. Reference for this packages methods: Albeke, S.E. et al. (2010) <doi:10.1007/s10980-010-9528-4>.

Resolve the dependency graph of R packages at a specific time point based on the information from various R-hub web services <https://blog.r-hub.io/>. The dependency graph can then be used to reconstruct the R computational environment with Rocker <https://rocker-project.org>.

Rbec is a adapted version of DADA2 for analyzing amplicon sequencing data from synthetic communities (SynComs), where the reference sequences for each strain exists. Rbec can not only accurately profile the microbial compositions in SynComs, but also predict the contaminants in SynCom samples.

This package provides a flexible alternative to the built-in rank() function called smartrank(). Optionally rank categorical variables by frequency (instead of in alphabetical order), and control whether ranking is based on descending/ascending order. smartrank() is suitable for both numerical and categorical data.

Assemble the panels of computerized adaptive multistage testing by the bottom-up and the top-down approach, and simulate the administration of the assembled panels. The full documentation and tutorials are at <https://github.com/xluo11/Rmst>. Reference: Luo and Kim (2018) <doi:10.1111/jedm.12174>.

This package provides estimation and inference procedures for boundary regression discontinuity (RD) designs using local polynomial methods, based on either bivariate coordinates or distance-based approaches. Methods are developed in Cattaneo, Titiunik, and Yu (2025) <https://mdcattaneo.github.io/papers/Cattaneo-Titiunik-Yu_2025_BoundaryRD.pdf>.

Access WHO Global Health Observatory (<https://www.who.int/data/gho/>) data from R via the `OData` API (<https://www.who.int/data/gho/info/gho-odata-api>), an application program interface providing a simple query interface to the World Health Organization's data and statistics content.

Suite of tools for using D3', a library for producing dynamic, interactive data visualizations. Supports translating objects into D3 friendly data structures, rendering D3 scripts, publishing D3 visualizations, incorporating D3 in R Markdown, creating interactive D3 applications with Shiny, and distributing D3 based htmlwidgets in R packages.

Import, analyze and visualize data from Roche(R) xCELLigence RTCA systems. The package imports real-time cell electrical impedance data into R. As an alternative to commercial software shipped along the system, the Bioconductor package RTCA provides several unique transformation (normalization) strategies and various visualization tools.

Function using lemmatization to classify educational programs according to the CINE(Classification International Normalized of Education) for Peru.

Wrapper functions to model and extract various quantitative information from absorption spectra of chromophoric dissolved organic matter (CDOM).

The c060 package provides additional functions to perform stability selection, model validation and parameter tuning for glmnet models.

Extended techniques for generalized linear models (GLMs), especially for binary responses, including parametric links and heteroscedastic latent variables.

Sequences encoding by using the chaos game representation. Löchel et al. (2019) <doi:10.1093/bioinformatics/btz493>.

This package provides a function to estimate panel-corrected standard errors. Data may contain balanced or unbalanced panels.

Estimation and Prediction Functions Using Bayesian Hierarchical Spatial Finlay-Wilkinson Model for Analysis of Multi-Environment Field Trials.

Maximum likelihood estimation of the scaled logit model parameters proposed in Dunning (2006) <doi:10.1002/sim.2282>.

Maximum likelihood tools to fit and compare models of species abundance distributions and of species rank-abundance distributions.

Return the first four moments of the SMN distributions (Normal, Student-t, Pearson VII, Slash or Contaminated Normal).

This package contains functions to interact with tally data from NGS experiments that is stored in HDF5 files.

This package provides tools for data management, count preprocessing, and differential analysis in massively parallel report assays (MPRA).

This is a package for significance analysis of Microarrays for differential expression analysis, RNAseq data and related problems.

This package provides tools to parse Illumina Sequence Analysis Viewer (SAV) files, access data, and generate QC plots.