Data sets and code blocks for the book Statistical Analysis of Network Data with R, 2nd Edition'.

This package provides rolling statistical functions based on date and time windows instead of n-lagged observations.

XML package for creating and reading and manipulating XML', with an object model based on Reference Classes'.

Provide R functions to read/write/format Excel 2007 and Excel 97/2000/XP/2003 file formats.

Classification using generalized partial least squares for two-group and multi-group (more than 2 group) classification.

This is a package for significance analysis of Microarrays for differential expression analysis, RNAseq data and related problems.

This package provides tools to parse Illumina Sequence Analysis Viewer (SAV) files, access data, and generate QC plots.

Remake is an enhanced version of GNU Make that adds improved error reporting, better tracing, profiling, and a debugger.

The Zarr specification defines a format for chunked, compressed, N-dimensional arrays. It's design allows efficient access to subsets of the stored array, and supports both local and cloud storage systems. Rarr aims to implement this specifcation in R with minimal reliance on an external tools or libraries.

This package converts back and forth between two representations of a convex polytope: as solution of a set of linear equalities and inequalities and as convex hull of set of points and rays. Also does linear programming and redundant generator elimination. All functions can use exact infinite-precision rational arithmetic.

This package implements various tests, visualizations, and metrics for diagnosing convergence of MCMC chains in phylogenetics. It implements and automates many of the functions of the AWTY package in the R environment, as well as a host of other functions. Warren, Geneva, and Lanfear (2017), <doi:10.1093/molbev/msw279>.

Data with irregular spatial support, such as runoff related data or data from administrative units, can with rtop be interpolated to locations without observations with the top-kriging method. A description of the package is given by Skøien et al (2014) <doi:10.1016/j.cageo.2014.02.009>.

This package allows you to render vector-based SVG images into high-quality custom-size bitmap arrays using the librsvg2 library. The resulting bitmap can be written to e.g. PNG, JPEG or WEBP format. In addition, the package can convert images directly to various formats such as PDF or PostScript.

Get programmatic access to the open data provided by the Czech Statistical Office (CZSO, <https://csu.gov.cz>).

Function using lemmatization to classify educational programs according to the CINE(Classification International Normalized of Education) for Peru.

Wrapper functions to model and extract various quantitative information from absorption spectra of chromophoric dissolved organic matter (CDOM).

The c060 package provides additional functions to perform stability selection, model validation and parameter tuning for glmnet models.

Extended techniques for generalized linear models (GLMs), especially for binary responses, including parametric links and heteroscedastic latent variables.

Sequences encoding by using the chaos game representation. Löchel et al. (2019) <doi:10.1093/bioinformatics/btz493>.

This package provides a function to estimate panel-corrected standard errors. Data may contain balanced or unbalanced panels.

Estimation and Prediction Functions Using Bayesian Hierarchical Spatial Finlay-Wilkinson Model for Analysis of Multi-Environment Field Trials.

Maximum likelihood tools to fit and compare models of species abundance distributions and of species rank-abundance distributions.

Return the first four moments of the SMN distributions (Normal, Student-t, Pearson VII, Slash or Contaminated Normal).

This package contains functions to interact with tally data from NGS experiments that is stored in HDF5 files.