This package provides an interface to the GeoNode API, allowing to upload and publish metadata and data in GeoNode'. For more information about the GeoNode API, see <https://geonode.org/>.

An excerpt of the data available at Gapminder.org. For each of 142 countries, the package provides values for life expectancy, GDP per capita, and population, every five years, from 1952 to 2007.

This package provides a collection of functions to perform Gaussian quadrature with different weight functions corresponding to the orthogonal polynomials in package orthopolynom. Examples verify the orthogonality and inner products of the polynomials.

It provides a general framework to analyse dependence between point processes in time. It includes parametric and non-parametric tests to study independence, and functions for generating and analysing different types of dependence.

This package implements the compartment model from Tokars (2018) <doi:10.1016/j.vaccine.2018.10.026>. This enables quantification of population-wide impact of vaccination against vaccine-preventable diseases such as influenza.

Nicely formatted frequency tables and contingency tables (1-way, 2-way, 3-way and 4-way tables), that can easily be exported to HTML or Office documents. Designed to work with pipes.

An efficient and flexible system to solve sparse mixed model equations. Important applications are the use of splines to model spatial or temporal trends as described in Boer (2023). (<doi:10.1177/1471082X231178591>).

Fitting recurrent events survival models for left-censored data with multiple imputation of the number of previous episodes. See Hernández-Herrera G, Moriña D, Navarro A. (2020) <arXiv:2007.15031>.

Enables researchers to visualize the prediction performance of any algorithm on the individual level (or close to it), given that the predicted outcome is either binary or continuous. Visual results are instantly comprehensible.

Add indicators (spinner, progress bar, gif) in your shiny applications to show the user that the server is busy. And other tools to let your users know something is happening (send notifications, reports, ...).

An overall test for seasonality of a given time series in addition to a set of individual seasonality tests as described by Ollech and Webel (forthcoming): An overall seasonality test. Bundesbank Discussion Paper.

Bindings to Tesseract': a powerful optical character recognition (OCR) engine that supports over 100 languages. The engine is highly configurable in order to tune the detection algorithms and obtain the best possible results.

This package implements combined p-value functions for two trials along with compatible combined point and interval estimates as described in Pawel, Roos, and Held (2025) <doi:10.48550/arXiv.2503.10246>.

This package implements rank-preserving structural failure time model (RPSFTM), iterative parameter estimation (IPE), inverse probability of censoring weights (IPCW), and two-stage estimation (TSE) methods for treatment switching in randomized clinical trials.

The most used functions on IPEA (Instituto de Pesquisa Economica Aplicada). Most of functions deal with brazilian names. It can guess the women single's name, extract prepositions or extract the first name.

This package provides a workflow for your analysis projects by combining literate programming ('knitr and rmarkdown') and version control ('Git', via git2r') to generate a website containing time-stamped, versioned, and documented results.

DNAhapeR is an R/BioConductor package for ultra-fast, high-throughput predictions of DNA shape features. The package allows to predict, visualize and encode DNA shape features for statistical learning.

Utility package to facilitate integration and analysis of EBI HoloFood data in R. This package streamlines access to the resource, allowing for direct loading of data into formats optimized for downstream analytics.

loci2path performs statistics-rigorous enrichment analysis of eQTLs in genomic regions of interest. Using eQTL collections provided by the Genotype-Tissue Expression (GTEx) project and pathway collections from MSigDB.

This package contains tools and methods for preprocessing microbiome data. Functionality includes library generation, demultiplexing, alignment, and microbe identification. It is in part an R translation of the PathoScope 2.0 pipeline.

OncoScore is a tool to measure the association of genes to cancer based on citation frequencies in biomedical literature. The score is evaluated from PubMed literature by dynamically updatable web queries.

Subsets of Promoter Capture Hi-C data conveniently packaged for Chicago users. Data includes interactions detected for chromosomes 20 and 21 in GM12878 cells and for chromosomes 18 and 19 in mESC.

The package provides a framework for generic quality control of data. It permits to create, manage and visualise individual or sets of quality control metrics and generate quality control reports in various formats.

This package can automatically extract statistical null-hypothesis significant testing (NHST) results from articles and recompute the p-values based on the reported test statistic and degrees of freedom to detect possible inconsistencies.