Prepare prescription data (such as from the Clinical Practice Research Datalink) into an analysis-ready format, with start and stop dates for each patient's prescriptions. Based on Pye et al (2018) <doi:10.1002/pds.4440>.
Likelihood-based inference for skewed count distributions, typically of degrees used in network modeling. "degreenet" is a part of the "statnet" suite of packages for network analysis. See Jones and Handcock <doi:10.1098/rspb.2003.2369>.
This package provides a set of methods to access and parse live filing information from the U.S. Securities and Exchange Commission (SEC - <https://www.sec.gov/>) including company and fund filings along with all associated metadata.
Clustering for categorical and mixed-type of data, to preventing classification biases due to race, gender or others sensitive attributes. This algorithm is an extension of the methodology proposed by "Santos & Heras (2020) <doi:10.28945/4643>".
This package provides a generative art system for producing tree-like images using an L-system to create the structures. The package includes tools for generating the data structures and visualise them in a variety of styles.
This package provides functions to calculate the best linear unbiased prediction of genotype-by-environment metrics: ecovalence, environmental variance, Finlay and Wilkinson regression and Lin and Binns superiority measure, based on a multi-environment genomic prediction model.
The main purpose of this package is to allow fitting of mixture distributions with generalised additive models for location scale and shape models see Chapter 7 of Stasinopoulos et al. (2017) <doi:10.1201/b21973-4>.
This package provides a RStudio addin to send some JavaScript
code to the V8 console. The user can send an entire JavaScript
file or only some selected lines. This is useful to test the code.
Approximate joint-inclusion probabilities in Unequal Probability Sampling, or compute Monte Carlo approximations of the first and second-order inclusion probabilities of a general sampling design as in Fattorini (2006) <doi:10.1093/biomet/93.2.269>.
Fit and simulate latent position and cluster models for statistical networks. See Krivitsky and Handcock (2008) <doi:10.18637/jss.v024.i05> and Krivitsky, Handcock, Raftery, and Hoff (2009) <doi:10.1016/j.socnet.2009.04.001>.
Generates quotes from Lero Lero', a database for meaningless sentences filled with corporate buzzwords, intended to be used as corporate lorem ipsum (see <http://www.lerolero.com/> for more information). Unfortunately, quotes are currently portuguese-only.
Recursive partition algorithms designed for fitting survival trees with left-truncated and right-censored (LTRC) data, as well as interval-censored data. The LTRC trees can also be used to fit survival trees with time-varying covariates.
This package provides functions for the robust estimation of parametric families of copulas using minimization of the Maximum Mean Discrepancy, following the article Alquier, Chérief-Abdellatif, Derumigny and Fermanian (2022) <doi:10.1080/01621459.2021.2024836>.
Perform library searches against electron ionization mass spectral databases using either the API provided by MS Search software (<https://chemdata.nist.gov/dokuwiki/doku.php?id=chemdata:nistlibs>) or custom implementations of the Identity and Similarity algorithms.
Systematically creates and modifies NONMEM(R) control streams. Harvests NONMEM output, builds run logs, creates derivative data, generates diagnostics. NONMEM (ICON Development Solutions <https://www.iconplc.com/>) is software for nonlinear mixed effects modeling. See package?nonmemica'.
Nonparametric methods for smoothing regression function data with change-points, utilizing range kernels for iterative and anisotropic smoothing methods. For further details, see the paper by John R.J. Thompson (2024) <doi:10.1080/02664763.2024.2352759>.
This package provides a client for the Open-Meteo API that retrieves Open-Meteo weather data in a tidy format. No API key is required. The API specification is located at <https://open-meteo.com/en/docs>.
Pageview data from the Wikimedia sites, such as Wikipedia <https://www.wikipedia.org/>, from entire projects to per-article levels of granularity, through the new RESTful API and data source <https://wikimedia.org/api/rest_v1/?doc>.
Create a side-by-side view of raster(image)s with an interactive slider to switch between regions of the images. This can be especially useful for image comparison of the same region at different time stamps.
The primary goal of Serpstat API <https://serpstat.com/api/> is to reduce manual SEO (search engine optimization) and PPC (pay-per-click) tasks. You can automate your keywords research or competitors analysis with this API wrapper.
Track and record the use of applications and the user's interactions with Shiny inputs. Allows to trace the inputs with which the user interacts, the outputs generated, as well as the errors displayed in the interface.
Automates translating the instructions of iatgen generated qsf (Qualtrics survey files) to other languages using either officially supported or user-supplied translations (for tutorial see Santos et al., 2023 <doi:10.17504/protocols.io.kxygx34jdg8j/v1>).
R implementation of the vol2bird software for generating vertical profiles of birds and other biological signals in weather radar data. See Dokter et al. (2011) <doi:10.1098/rsif.2010.0116> for a paper describing the methodology.
The CNVRanger package implements a comprehensive tool suite for CNV analysis. This includes functionality for summarizing individual CNV calls across a population, assessing overlap with functional genomic regions, and association analysis with gene expression and quantitative phenotypes.