Maximum likelihood tools to fit and compare models of species abundance distributions and of species rank-abundance distributions.

Return the first four moments of the SMN distributions (Normal, Student-t, Pearson VII, Slash or Contaminated Normal).

This is a package for operations on triangular meshes based on VCGLIB. This package integrates nicely with the R-package rgl to render the meshes processed by Rvcg. The Visualization and Computer Graphics Library (VCG for short) is a library for manipulation, processing and displaying with OpenGL of triangle and tetrahedral meshes.

This package provides methods and tools for Singular Spectrum Analysis including decomposition, forecasting and gap-filling for univariate and multivariate time series. General description of the methods with many examples can be found in the book Golyandina (2018, <doi:10.1007/978-3-662-57380-8>). See citation("Rssa") for details.

Quickly imports, processes, analyzes, and visualizes mass-spectrometric data. Includes functions for easily extracting specific data and measurements from large (multi-gigabyte) raw Bruker data files, as well as a set of S3 object classes for manipulating and measuring mass spectrometric peaks and plotting peaks and spectra using the ggplot2 package.

This package provides a simple WebDAV client that provides functions to fetch and send files or folders to servers using the WebDAV protocol (see RFC 4918 <https://www.rfc-editor.org/rfc/rfc4918>). Only a subset of the protocol is implemented (e.g. file locks are not yet supported).

Toolkit for identification and statistical testing of RNA editing signals from within R. Provides support for identifying sites from bulk-RNA and single cell RNA-seq datasets, and general methods for extraction of allelic read counts from alignment files. Facilitates annotation and exploratory analysis of editing signals using Bioconductor packages and resources.

This package provides a collection of functions for numerical construction of optimal discriminating designs. At the current moment T-optimal designs (which maximize the lower bound for the power of F-test for regression model discrimination), KL-optimal designs (for lognormal errors) and their robust analogues can be calculated with the package.

Issues RPC-JSON calls to bitcoind', the daemon of Bitcoin Cash (BCH), to extract transaction data from the blockchain. BCH is a fork of Bitcoin that permits a greater number of transactions per second. A BCH daemon is available under an MIT license from the Bitcoin Unlimited website <https://www.bitcoinunlimited.info>.

Assists for presentation and visualization of data from the Norwegian Health Quality Registries following the standardization based on the requirement specified by the National Service for Health Quality Registries. This requirement can be accessed from (<https://www.kvalitetsregistre.no/resultater-til-publisering-pa-nett>). Unfortunately the website is only available in Norwegian.

This package lets you perform unsupervised clustering of amplicon sequencing data in microbiome studies with the Dirichlet-tree Multinomial Mixtures.

This package adds 3D perspective plotting of points, paths, and line, 3D perspective axes, 3D perspective annotations, and wireframe plots.

This is a QTL mapping toolkit for inbred crosses and recombinant inbred lines. It includes maximum likelihood and Bayesian tools.

The ade4 package contains data analysis functions to analyze ecological and environmental data in the framework of Euclidean exploratory methods.

This package provides functions for feed-forward neural networks with a single hidden layer, and for multinomial log-linear models.

This package provides useful tools to pry back the covers of R and understand the language at a deeper level.

This package provides a more comfortable interface to work with R data or source files in a key-value fashion.

This is a framework for construction and analysis of 2D Monte-Carlo simulations. In addition, this package includes various distributions.

Given a set of clustering labels, Dune merges pairs of clusters to increase mean ARI between labels, improving replicability.

Calculates the credit debt for the next period based on the available data using the cross-classification credibility model.

Estimates the ratio of the regression coefficients and the dispersion parameter in conditional generalized linear models for clustered data.

This package provides functions for direct surrogate variable analysis, which can identify hidden factors in high-dimensional biomedical data.

Apache licensed alternative to Highcharter which provides functions for both fast and beautiful interactive visualization for Markdown and Shiny'.

This package provides a small utility which wraps Rscript and provides access to all R functions from the shell.