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This is an R package for dimension reduction based on finite Gaussian mixture modeling of inverse regression.
This package provides a collection of R functions for analyzing finite mixture models.
This is a package to simplify loading of system fonts and Google Fonts into R, in order to support other packages.
This package provides string and binary representations of objects for several formats and MIME types.
This package provides a collection of methods for smoothing numerical data, commencing with a port of the Matlab gaussian window smoothing function. In addition, several functions typically used in smoothing of financial data are included.
This package provides a set of predicates and assertions for checking the properties of variables, such as length, names and attributes. This is mainly for use by other package developers who want to include run-time testing features in their own packages.
This package provides the URL checking tools available in R 4.1+ as a package for earlier versions of R. It also uses concurrent requests so can be much faster than the serial versions.
This package provides a solution for analyzing digital images of plankton. In combination with ImageJ, an image analysis system, it processes digital images, measures individuals, trains for automatic classification of taxa, and finally, measures plankton samples (abundances, total and partial size spectra or biomasses, etc.).
This package provides tools for functional linear modeling and analysis of actigraphy data.
This package computes two-sample confidence intervals for single, paired and independent proportions.
This package provides interfaces to audio devices (mainly sample-based) from R to allow recording and playback of audio.
How fast can you type R functions on your keyboard? Find out by running a zty.pe game: export R functions as instructions to type to destroy opponents' vessels.
This package provides tools to identify global ("unknown" or "free") objects in R expressions by code inspection using various strategies, e.g. conservative or liberal. The objective of this package is to make it as simple as possible to identify global objects for the purpose of exporting them in distributed compute environments.
The grammar of graphics as shown in ggplot2 has provided an expressive API for users to build plots. This package ggside extends ggplot2 by allowing users to add graphical information about one of the main panel's axis using a familiar ggplot2 style API with tidy data. This package is particularly useful for visualizing metadata on a discrete axis, or summary graphics on a continuous axis such as a boxplot or a density distribution.
This package creates "Table 1", i.e., description of baseline patient characteristics, which is essential in every medical research. It supports both continuous and categorical variables, as well as p-values and standardized mean differences. Weighted data are supported via the survey package.
This package provides a stepwise approach to identifying recombination breakpoints in a genomic sequence alignment.
The r-abhgenotyper package provides simple imputation, error-correction and plotting capacities for genotype data. The package is supposed to serve as an intermediate but independent analysis tool between the TASSEL GBS pipeline and the r-qtl package. It provides functionalities not found in either TASSEL or r-qtl in addition to visualization of genotypes as "graphical genotypes".
User-facing R functions are provided to parse, compile, test, estimate, and analyze Stan models by accessing the header-only Stan library provided by the StanHeaders package. The Stan project develops a probabilistic programming language that implements full Bayesian statistical inference via Markov Chain Monte Carlo, rough Bayesian inference via 'variational' approximation, and (optionally penalized) maximum likelihood estimation via optimization. In all three cases, automatic differentiation is used to quickly and accurately evaluate gradients without burdening the user with the need to derive the partial derivatives.
This package provides the header files of mio, a cross-platform C++11 header-only library for memory mapped file IO.
This package provides useful tools for structural equation modeling.
Function-oriented Make-like declarative pipelines for statistics and data science are supported in the targets R package. As an extension to targets, the tarchetypes package provides convenient user-side functions to make targets easier to use. By establishing reusable archetypes for common kinds of targets and pipelines, these functions help express complicated reproducible pipelines concisely and compactly. The methods in this package were influenced by the drake R package by Will Landau (2018) <doi:10.21105/joss.00550>.
This package provides functions for viewing 2D and 3D data, including perspective plots, slice plots, surface plots, scatter plots, etc. It includes data sets from oceanography.
This package provides various tools for developers of R packages interfacing with Stan, including functions to set up the required package structure, S3 generics and default methods to unify function naming across Stan-based R packages, and vignettes with recommendations for developers.
This is a package to read raw accelerometry from GT3X+ accelerometry data and plain table data to calculate the Activity Index from Bai et al. (2016) doi:10.1371/journal.pone.0160644.