This package provides functions to compute and visualize movement-based kernel density estimates (MKDEs) for animal utilization distributions in 2 or 3 spatial dimensions.

An R autograding extension for Otter-Grader (<https://otter-grader.readthedocs.io>). It supports grading R scripts, R Markdown documents, and R Jupyter Notebooks.

This package provides a comprehensive set of helpers that streamline data transmission and processing, making it effortless to interact with the OpenAI API.

The Penn World Table 8.x provides information on relative levels of income, output, inputs, and productivity for 167 countries between 1950 and 2011.

This package provides functions for estimating probabilistic latent feature models with a disjunctive, conjunctive or additive mapping rule on (aggregated) binary three-way data.

Reviews other packages during code review by looking at their dependencies, code style, code complexity, and how internally defined functions interact with one another.

This package provides a set of functions for computing potential evapotranspiration and several widely used drought indices including the Standardized Precipitation-Evapotranspiration Index (SPEI).

Generalization of the classification and regression tree (CART) model that partitions subjects into terminal nodes and tailors machine learning model to each terminal node.

Generating realizations of a fractal Brownian function on uniform 1D & 2D grid with classic and generic versions of the Voss algorithm (random sequential additions).

XMRs combine X-Bar control charts and Moving Range control charts. These functions also will recalculate the reference lines when significant change has occurred.

This package is an R package that offers models and tools for subject level analysis of X chromosome inactivation (XCI) and XCI-escape inference.

This package provides conditional inference procedures for the general independence problem including two-sample, K-sample (non-parametric ANOVA), correlation, censored, ordered and multivariate problems.

Raider is a simple shredding program built for GNOME. Also known as File Shredder, it uses the GNU Core Utility called shred to securely delete files.

Roffit is a program that reads an nroff file and outputs an HTML file. It is typically used to display man pages on a web site.

Enables binary package installations on Linux distributions. Provides access to RStudio public repositories at <https://packagemanager.posit.co>, and transparent management of system requirements without administrative privileges. Currently supported distributions are CentOS / RHEL 7-9, and several RHEL derivatives ('Rocky Linux', AlmaLinux', Oracle Linux', and Amazon Linux'), openSUSE / SLES 15.4-5, Debian 11-12, and Ubuntu LTS 20-22.

Applies methods used to estimate animal homerange, but instead of geospatial coordinates, we use isotopic coordinates. The estimation methods include: 1) 2-dimensional bivariate normal kernel utilization density estimator, 2) bivariate normal ellipse estimator, and 3) minimum convex polygon estimator, all applied to stable isotope data. Additionally, functions to determine niche area, polygon overlap between groups and levels (confidence contours) and plotting capabilities.

STG is a method for feature selection in neural network. The procedure is based on probabilistic relaxation of the l0 norm of features, or the count of the number of selected features. The framework simultaneously learns either a nonlinear regression or classification function while selecting a small subset of features. Read more: Yamada et al. (2020) <https://proceedings.mlr.press/v119/yamada20a.html>.

This package provides functions for studying realized genetic relatedness between people. Users will be able to simulate inheritance patterns given pedigree structures, generate SNP marker data given inheritance patterns, and estimate realized relatedness between pairs of individuals using SNP marker data. See Wang (2017) <doi:10.1534/genetics.116.197004>. This work was supported by National Institutes of Health grants R37 GM-046255.

This package provides an interface to the Nexus class library which allows parsing of NEXUS, Newick and other phylogenetic tree file formats. It provides elements of the file that can be used to build phylogenetic objects such as ape's phylo or phylobase's phylo4(d). This functionality is demonstrated with read_newick_phylo() and read_nexus_phylo().

Robust kernel center matrix, robust kernel cross-covariance operator for kernel unsupervised methods, kernel canonical correlation analysis, influence function of identifying significant outliers or atypical objects from multimodal datasets. Alam, M. A, Fukumizu, K., Wang Y.-P. (2018) <doi:10.1016/j.neucom.2018.04.008>. Alam, M. A, Calhoun, C. D., Wang Y.-P. (2018) <doi:10.1016/j.csda.2018.03.013>.

This package provides various statistical methods for designing and analyzing two-stage randomized controlled trials using the methods developed by Imai, Jiang, and Malani (2021) <doi:10.1080/01621459.2020.1775612> and (2022+) <doi:10.48550/arXiv.2011.07677>. The package enables the estimation of direct and spillover effects, conduct hypotheses tests, and conduct sample size calculation for two-stage randomized controlled trials.

Evaluates R source codes by variable and/or functions names. Similar source codes should deliver similarity coefficients near one. Since neither the frequency nor the order of the used names is considered, a manual inspection of the R source code is required to check for similarity. Possible use cases include detection of code clones for improving software quality and of plagiarism amongst students assignments.

raylib is a high-level library for video game programming. It aims to abstract away platform and graphics details, allowing you to focus on writing your game.

raylib is a high-level library for video game programming. It aims to abstract away platform and graphics details, allowing you to focus on writing your game.