This package provides the core data structure and API to represent and interact with gated cytometry data.

This is a supplement to the maps package providing the larger and/or higher-resolution databases.

Create interactive 3D scatter plots, network plots, and globes in R using the three.js visualization library.

This package can be used to solve Linear Programming / Linear Optimization problems by using the simplex algorithm.

This package contains supporting data sets that are used in other packages maintained by Torsten Hothorn.

This package provides a subclass of Object that includes the Comparable module for handling dates.

The probabilities by one-sided NOISeq are combined by Fisher's method or Stouffer's method.

SHDZ http://genome-www5.stanford.edu/ Annotation Data (SHDZ) assembled using data from public repositories.

rocSOLVER is a work-in-progress implementation of a subset of LAPACK functionality on the ROCm platform.

This package provides a system for reporting messages, which offers certain useful features over the standard R system, such as the incorporation of output consolidation, message filtering, assertions, expression substitution, automatic generation of stack traces for debugging, and conditional reporting based on the current "output level".

This package implements UbiBic algorithm in R. This biclustering algorithm for analysis of gene expression data was introduced by Zhenjia Wang et al. in 2016. It is currently considered the most promising biclustering method for identification of meaningful structures in complex and noisy data.

This package provides tools for the comparison of distributions. This includes nonparametric estimation of the relative distribution PDF and CDF and numerical summaries as described in "Relative Distribution Methods in the Social Sciences" by Mark S. Handcock and Martina Morris, Springer-Verlag, 1999, Springer-Verlag, ISBN 0387987789.

This package provides methods for caching or memoization of objects and results. With this package, any R object can be cached in a key-value storage where the key can be an arbitrary set of R objects. The cache memory is persistent (on the file system).

This package provides functions that are needed by many other packages on Bioconductor or which replace R functions.

This package provides a set of protein ID mappings for PFAM, assembled using data from public repositories.

This package provides tools for discriminative motif discovery in high throughput genetic sequencing data sets using regression methods.

A treemap is a space-filling visualization of hierarchical structures. This package offers great flexibility to draw treemaps.

This package provides a set of tools for displaying, modeling and analysing multivariate abundance data in community ecology.

This package provides tools for accurate calculations and visualization of precision-recall and ROC (Receiver Operator Characteristics) curves.

Rhythmbox is a music playing application for GNOME. It supports playlists, song ratings, and any codecs installed through gstreamer.

GRPC is a high performance, open-source universal RPC framework. This package provides a ruby interface for it.

This package provides useful utilities from Seminar fuer Statistik ETH Zurich, including many that are related to graphics.

The `miaTime` package provides tools for microbiome time series analysis based on (Tree)SummarizedExperiment infrastructure.

Whole-exome sequencing data from a murine small-cell lung tumor; only contains data of chromosome 4.