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r-treestartr 0.1.0
Propagated dependencies: r-phytools@2.4-4 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://ropensci.github.io/treeStartR/
Licenses: Expat
Synopsis: Generate Starting Trees for Combined Molecular, Morphological and Stratigraphic Data
Description:

Combine a list of taxa with a phylogeny to generate a starting tree for use in total evidence dating analyses.

r-hicontacts 1.10.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.2.1 r-summarizedexperiment@1.38.1 r-stringr@1.5.1 r-scales@1.4.0 r-s4vectors@0.46.0 r-rspectra@0.16-2 r-readr@2.1.5 r-matrix@1.7-3 r-iranges@2.42.0 r-interactionset@1.36.1 r-hicexperiment@1.8.0 r-ggrastr@1.0.2 r-ggplot2@3.5.2 r-genomicranges@1.60.0 r-genomeinfodb@1.44.0 r-dplyr@1.1.4 r-biocparallel@1.42.0 r-biocio@1.18.0 r-biocgenerics@0.54.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://github.com/js2264/HiContacts
Licenses: Expat
Synopsis: Analysing cool files in R with HiContacts
Description:

HiContacts provides a collection of tools to analyse and visualize Hi-C datasets imported in R by HiCExperiment.

r-bionetstat 1.22.0
Propagated dependencies: r-biocparallel@1.42.0 r-dt@0.33 r-ggplot2@3.5.2 r-hmisc@5.2-3 r-igraph@2.1.4 r-knitr@1.50 r-markdown@2.0 r-pathview@1.48.0 r-pheatmap@1.0.12 r-plyr@1.8.9 r-psych@2.5.3 r-rcolorbrewer@1.1-3 r-rjsonio@2.0.0 r-rmarkdown@2.29 r-shiny@1.10.0 r-shinybs@0.61.1 r-whisker@0.4.1 r-yaml@2.3.10
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://github.com/jardimViniciusC/BioNetStat
Licenses: GPL 3+
Synopsis: Biological network analysis
Description:

This package provides a package to perform differential network analysis, differential node analysis (differential coexpression analysis), network and metabolic pathways view.

r-bumphunter 1.50.0
Propagated dependencies: r-annotationdbi@1.70.0 r-biocgenerics@0.54.0 r-dorng@1.8.6.2 r-foreach@1.5.2 r-genomeinfodb@1.44.0 r-genomicfeatures@1.60.0 r-genomicranges@1.60.0 r-iranges@2.42.0 r-iterators@1.0.14 r-limma@3.64.1 r-locfit@1.5-9.12 r-matrixstats@1.5.0 r-s4vectors@0.46.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://github.com/ririzarr/bumphunter
Licenses: Artistic License 2.0
Synopsis: Find bumps in genomic data
Description:

This package provides tools for finding bumps in genomic data in order to identify differentially methylated regions in epigenetic epidemiology studies.

r-stabledist 0.7-2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.rmetrics.org
Licenses: GPL 2+
Synopsis: Stable distribution functions
Description:

This package provides density, probability and quantile functions, and random number generation for (skew) stable distributions, using the parametrizations of Nolan.

r-abbreviate 0.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/sigbertklinke/abbreviate
Licenses: GPL 3
Synopsis: Readable string abbreviation
Description:

This package abbreviates strings to a specified minimum number of characters, such that the strings remain unique (if they originally were).

r-bundesligr 0.1.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/ottlngr/bundesligR
Licenses: GPL 3
Synopsis: All final tables of the Bundesliga
Description:

This package provides all final tables of Germany's highest football league, the Bundesliga. It contains data from 1964 to 2016.

r-extradistr 1.10.0
Propagated dependencies: r-rcpp@1.0.14
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/twolodzko/extraDistr
Licenses: GPL 2
Synopsis: Additional univariate and multivariate distributions
Description:

This package implements density, distribution functions, quantile functions and random generation functions for a large number of univariate and multivariate distributions.

r-mosaicdata 0.20.4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/mosaicData/
Licenses: GPL 2+
Synopsis: Data sets for project Mosaic
Description:

This package provides data sets from project Mosaic http://mosaic-web.org used to teach mathematics, statistics, computation and modeling.

apply-refact 0.10.0.0
Dependencies: ghc-refact@0.3.0.2 ghc-exactprint@1.5.0 ghc-paths@0.1.0.12 ghc-extra@1.7.13 ghc-syb@0.7.2.3 ghc-filemanip@0.3.6.3 ghc-uniplate@1.6.13 ghc-unix-compat@0.5.4 ghc-optparse-applicative@0.17.1.0
Channel: guix
Location: gnu/packages/haskell-apps.scm (gnu packages haskell-apps)
Home page: https://github.com/mpickering/apply-refact
Licenses: Modified BSD
Synopsis: Perform refactorings specified by the refact library
Description:

This package lets you perform refactorings specified by the refact library. It is primarily used with HLint's --refactor flag.

r-rulestools 0.1.1
Propagated dependencies: r-tidyr@1.3.1 r-mice@3.18.0 r-magrittr@2.0.3 r-ggplot2@3.5.2 r-eulerr@7.0.2 r-arules@1.7-11
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/nikolett0203/RulesTools
Licenses: Expat
Synopsis: Preparing, Analyzing, and Visualizing Association Rules
Description:

Streamlines data preprocessing, analysis, and visualization for association rule mining. Designed to work with the arules package, features include discretizing data frames, generating rule set intersections, and visualizing rules with heatmaps and Euler diagrams. RulesTools also includes a dataset on Brook trout detection from Nolan et al. (2022) <doi:10.1007/s13412-022-00800-x>.

r-rclipboard 0.2.1
Propagated dependencies: r-shiny@1.10.0 r-bslib@0.9.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/sbihorel/rclipboard/
Licenses: Expat
Synopsis: Shiny/R Wrapper for 'clipboard.js'
Description:

Leverages the functionality of clipboard.js', a JavaScript library for HMTL5-based copy to clipboard from web pages (see <https://clipboardjs.com> for more information), and provides a reactive copy-to-clipboard UI button component, called rclipButton', and a a reactive copy-to-clipboard UI link component, called rclipLink', for shiny R applications.

ruby-bugsnag 6.24.2
Channel: trevdev
Location: trevdev/packages/ruby.scm (trevdev packages ruby)
Home page: https://github.com/bugsnag/bugsnag-ruby
Licenses: Expat
Synopsis: Ruby notifier for bugsnag.com
Description:

The Bugsnag exception reporter for Ruby gives you instant notification of exceptions thrown from your Rails, Sinatra, Rack or plain Ruby app.

r-aws-lambda 0.2.0
Propagated dependencies: r-jsonlite@2.0.0 r-httr@1.4.7 r-base64enc@0.1-3 r-aws-signature@0.6.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/cloudyr/aws.lambda
Licenses: GPL 3
Synopsis: AWS Lambda Client Package
Description:

This package provides a simple client package for the Amazon Web Services ('AWS') Lambda API <https://aws.amazon.com/lambda/>.

r-boolfilter 1.0.0
Propagated dependencies: r-rlab@4.0 r-boolnet@2.1.9
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=BoolFilter
Licenses: Artistic License 2.0
Synopsis: Optimal Estimation of Partially Observed Boolean Dynamical Systems
Description:

This package provides tools for optimal and approximate state estimation as well as network inference of Partially-Observed Boolean Dynamical Systems.

r-dosresmeta 2.2.0
Propagated dependencies: r-mixmeta@1.2.2
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://alecri.github.io/software/dosresmeta.html
Licenses: GPL 2
Synopsis: Multivariate Dose-Response Meta-Analysis
Description:

Estimates dose-response relations from summarized dose-response data and to combines them according to principles of (multivariate) random-effects models.

r-ecotourism 0.1.0
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/vahdatjavad/ecotourism
Licenses: Expat
Synopsis: Collection of Data on Wildlife Sightings, Tourism Counts, and Weather from Australia
Description:

This is a collection of data files for exploring sightings of wild things, relative to weather and tourism patterns in Australia.

r-fractaldim 0.8-5
Propagated dependencies: r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=fractaldim
Licenses: GPL 2+
Synopsis: Estimation of Fractal Dimensions
Description:

This package implements various methods for estimating fractal dimension of time series and 2-dimensional data <doi:10.1214/11-STS370>.

r-irexamples 0.0.4
Propagated dependencies: r-twang@2.6.1 r-tigris@2.2.1 r-tidygeocoder@1.0.6 r-tidycensus@1.7.3 r-survey@4.4-2 r-sf@1.0-21 r-rvest@1.0.4 r-rstanarm@2.32.1 r-rselenium@1.7.9 r-maps@3.4.3 r-ggthemes@5.1.0 r-ggplot2@3.5.2 r-geodist@0.1.1 r-forcats@1.0.0 r-dplyr@1.1.4 r-disimpact@0.0.21
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://github.com/vinhdizzo/IRexamples
Licenses: GPL 3
Synopsis: Collection of Practical Institutional Research Examples and Tutorials
Description:

This package provides examples of code for analyzing data or accomplishing tasks that may be useful to institutional or educational researchers.

r-kirby21-t1 1.8.0
Propagated dependencies: r-kirby21-base@1.7.3
Channel: guix-cran
Location: guix-cran/packages/k.scm (guix-cran packages k)
Home page: https://www.nitrc.org/projects/multimodal/
Licenses: GPL 2
Synopsis: Example T1 Structural Data from the Multi-Modal MRI 'Reproducibility' Resource
Description:

Structural T1 magnetic resonance imaging ('MRI') data from the Kirby21 reproducibility study <doi:10.1016/j.neuroimage.2010.11.047>.

r-kpodclustr 1.1
Channel: guix-cran
Location: guix-cran/packages/k.scm (guix-cran packages k)
Home page: http://jocelynchi.com/kpodclustr
Licenses: Expat
Synopsis: Method for Clustering Partially Observed Data
Description:

Software for k-means clustering of partially observed data from Chi, Chi, and Baraniuk (2016) <doi:10.1080/00031305.2015.1086685>.

r-limorhyde2 0.1.0
Propagated dependencies: r-zeallot@0.2.0 r-pbs@1.1 r-mashr@0.2.79 r-limma@3.64.1 r-iterators@1.0.14 r-hdinterval@0.2.4 r-foreach@1.5.2 r-deseq2@1.48.1 r-data-table@1.17.4 r-checkmate@2.3.2 r-ashr@2.2-63 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://limorhyde2.hugheylab.org
Licenses: GPL 2
Synopsis: Quantify Rhythmicity and Differential Rhythmicity in Genomic Data
Description:

Fit linear models based on periodic splines, moderate model coefficients using multivariate adaptive shrinkage, then compute properties of the moderated curves.

r-pysparklyr 0.1.9
Propagated dependencies: r-vctrs@0.6.5 r-tidyselect@1.2.1 r-tidyr@1.3.1 r-sparklyr@1.9.2 r-rstudioapi@0.17.1 r-rsconnect@1.4.1 r-rlang@1.1.6 r-reticulate@1.42.0 r-purrr@1.0.4 r-processx@3.8.6 r-magrittr@2.0.3 r-httr2@1.1.2 r-glue@1.8.0 r-fs@1.6.6 r-dplyr@1.1.4 r-dbplyr@2.5.0 r-dbi@1.2.3 r-cli@3.6.5 r-arrow@20.0.0.2
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/mlverse/pysparklyr
Licenses: Expat
Synopsis: Provides a 'PySpark' Back-End for the 'sparklyr' Package
Description:

It enables sparklyr to integrate with Spark Connect', and Databricks Connect by providing a wrapper over the PySpark python library.

r-prettycode 1.1.0
Propagated dependencies: r-crayon@1.5.3
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/r-lib/prettycode#readme
Licenses: Expat
Synopsis: Pretty Print R Code in the Terminal
Description:

Replace the standard print method for functions with one that performs syntax highlighting, using ANSI colors, if the terminal supports them.

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