This package provides memory efficient S4 classes for storing sequences "externally" (behind an R external pointer, or on disk).

This package is used for cell type identification in spatial transcriptomics. It also handles cell type-specific differential expression.

This is a package for maximum likelihood estimation of censored regression (Tobit) models with cross-sectional and panel data.

This package provides a violin plot, which is a combination of a box plot and a kernel density plot.

This package provides an implementation of the FastICA algorithm to perform independent component analysis (ICA) and projection pursuit.

The tkrplot package lets you place R graphics in a Tk, cross-platform graphical user interface toolkit widget.

The gdtools package provides functionalities to get font metrics and to generate base64 encoded string from raster matrix.

Rove is a unit testing framework for Common Lisp applications. This is intended to be a successor of Prove.

Slim is a template language for Ruby that aims to reduce the syntax to the minimum while remaining clear.

This package provides more than 9900 annotated position frequency matrices from 14 public sources, for multiple organisms.

The unmodified Linux kernel, including nonfree blobs, for running Guix System on hardware which requires nonfree software to function.

This package provides methods to parse, query and serialize information stored in the Resource Description Framework (RDF). This package supports RDF by implementing an R interface to the Redland RDF C library. In brief, RDF provides a structured graph consisting of Statements composed of Subject, Predicate, and Object Nodes.

This is a package that allows conversion to and from data in JavaScript Object Notation (JSON) format. This allows R objects to be inserted into Javascript/ECMAScript/ActionScript code and allows R programmers to read and convert JSON content to R objects. This is an alternative to the rjson package.

This package implements many algorithms for statistical learning on sparse matrices: matrix factorizations, matrix completion, elastic net regressions, factorization machines. The rsparse package also enhances the Matrix package by providing methods for multithreaded <sparse, dense> matrix products and native slicing of the sparse matrices in Compressed Sparse Row (CSR) format.

Functions, workflow, and a Shiny application for visualizing sequence conservation and designing degenerate primers, probes, and (RT)-(q/d)PCR assays from a multiple DNA sequence alignment. The results can be presented in data frame format and visualized as dashboard-like plots. For more information, please see the package vignette.

This package provides a replication of key functionality from dplyr and the wider tidyverse using only base.

This package provides datasets to accompany J. Fox and S. Weisberg, An R Companion to Applied Regression, Third Edition, Sage.

This package provides basic infrastructure for linear test statistics and permutation inference in the framework of Strasser and Weber (1999).

Monitor a hardware random number generator, and supply entropy from that to the system kernel's /dev/random machinery.

CBOR is a library for the CBOR format, based on Sadayuki Furuhashi's MessagePack library.

Yell is a comprehensive logging replacement for Ruby. It defines multiple adapters, various log level combinations and message formatting options.

This package provides a set of tools for statistical relative protein significance analysis in DDA, SRM and DIA experiments.

Base annotation databases for pig, intended ONLY to be used by AnnotationDbi to produce regular annotation packages.

ROCm tracer provides an API to provide functionality for registering the runtimes API callbacks and asynchronous activity records pool support.