To visualize the gene structure with multiple isoforms better, I developed this package to draw different transcript structures easily.
This package provides a wrapper for Jagger, a morphological analyzer proposed in Yoshinaga (2023) <arXiv:2305.19045>. Jagger uses patterns derived from morphological dictionaries and training data sets and applies them from the beginning of the input. This simultaneous and deterministic process enables it to effectively perform tokenization, POS tagging, and lemmatization.
This package provides a tool to read and manipulate data generated from RiverWare'(TM) <https://www.riverware.org/> simulations. RiverWare and RiverSMART generate data in "rdf", "csv", and "nc" format. This package provides an interface to read, aggregate, and summarize data from one or more simulations in a dplyr pipeline.
Vendors the igraph C source code and builds it into a static library. Other Bioconductor packages can link to libigraph.a in their own C/C++ code. This is intended for packages wrapping C/C++ libraries that depend on the igraph C library and cannot be easily adapted to use the igraph R package.
Read and write labelled sparse matrices in text format as used by software such as SVMLight', LibSVM', ThunderSVM', LibFM', xLearn', XGBoost', LightGBM', and others. Supports labelled data for regression, classification (binary, multi-class, multi-label), and ranking (with qid field), and can handle header metadata and comments in files.
This package provides an R interface to the JuliaBUGS.jl package (<https://github.com/TuringLang/JuliaBUGS.jl>) for Bayesian inference using the BUGS modeling language. Allows R users to run models in Julia and return results as familiar R objects. Visualization and posterior analysis are supported via the bayesplot and posterior packages.
This package provides tools for finding bumps in genomic data in order to identify differentially methylated regions in epigenetic epidemiology studies.
This package provides a package to perform differential network analysis, differential node analysis (differential coexpression analysis), network and metabolic pathways view.
This package provides all final tables of Germany's highest football league, the Bundesliga. It contains data from 1964 to 2016.
This package implements density, distribution functions, quantile functions and random generation functions for a large number of univariate and multivariate distributions.
This package provides data sets from project Mosaic http://mosaic-web.org used to teach mathematics, statistics, computation and modeling.
This package abbreviates strings to a specified minimum number of characters, such that the strings remain unique (if they originally were).
This package provides density, probability and quantile functions, and random number generation for (skew) stable distributions, using the parametrizations of Nolan.
This package lets you perform refactorings specified by the refact library. It is primarily used with HLint's --refactor flag.
HiContacts provides a collection of tools to analyse and visualize Hi-C datasets imported in R by HiCExperiment.
Collect your data on digital marketing campaigns from Amazon Ads using the Windsor.ai API <https://windsor.ai/api-fields/>.
Correlation chart of two set (x and y) of data. Using Quartiles with boxplot style. Visualize the effect of factor.
This package provides tools for constructing board/grid based games, as well as readily available game(s) for your entertainment.
This package provides functions to utilize a command line utility that does bulk inserts and exports from SQL Server databases.
This package creates an HTML vertical timeline from a data frame as an input for rmarkdown documents and shiny applications.
Identification of cardinal dates (begin, time of maximum, end of mass developments) in ecological time series using fitted Weibull functions.
Data sets included here are for use with package GEOmap. These include world map, USA map, Coso map, Japan Map.
Calculates a suite of hydrologic indices for daily time series data that are widely used in hydrology and stream ecology.
Use the Official Hacker News API through R. Retrieve posts, articles and other items in form of convenient R objects.