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r-urlchecker 1.0.1
Propagated dependencies: r-cli@3.6.5 r-curl@6.2.3 r-xml2@1.3.8
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/r-lib/urlchecker
Licenses: GPL 3
Synopsis: Run CRAN URL checks from older R versions
Description:

This package provides the URL checking tools available in R 4.1+ as a package for earlier versions of R. It also uses concurrent requests so can be much faster than the serial versions.

r-effectsize 1.0.1
Propagated dependencies: r-bayestestr@0.16.0 r-datawizard@1.1.0 r-insight@1.3.0 r-parameters@0.26.0 r-performance@0.14.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/easystats/effectsize
Licenses: GPL 3
Synopsis: Indices of effect size and standardized parameters
Description:

This package provides utilities to work with indices of effect size and standardized parameters for a wide variety of models, allowing computation and conversion of indices such as Cohen's d, r, odds, etc.

emacs-relint 2.1
Propagated dependencies: emacs-xr@2.1
Channel: guix
Location: gnu/packages/emacs-xyz.scm (gnu packages emacs-xyz)
Home page: https://github.com/mattiase/relint
Licenses: GPL 3+
Synopsis: Elisp regexp mistake finder
Description:

Relint (regular expression lint) scans Elisp files for mistakes in regexps, including deprecated syntax and bad practice. It also checks the regexp-like arguments to skip-chars-forward and skip-chars-backward.

r-recordtest 2.2.0
Propagated dependencies: r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/JorgeCastilloMateo/RecordTest
Licenses: GPL 3
Synopsis: Inference Tools in Time Series Based on Record Statistics
Description:

Statistical tools based on the probabilistic properties of the record occurrence in a sequence of independent and identically distributed continuous random variables. In particular, tools to prepare a time series as well as distribution-free trend and change-point tests and graphical tools to study the record occurrence. Details about the implemented tools can be found in Castillo-Mateo et al. (2023a) <doi:10.18637/jss.v106.i05> and Castillo-Mateo et al. (2023b) <doi:10.1016/j.atmosres.2023.106934>.

r-r2dii-data 0.6.1
Propagated dependencies: r-lifecycle@1.0.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://rmi-pacta.github.io/r2dii.data/
Licenses: CC0
Synopsis: Datasets to Measure the Alignment of Corporate Loan Books with Climate Goals
Description:

These datasets support the implementation in R of the software PACTA (Paris Agreement Capital Transition Assessment), which is a free tool that calculates the alignment between corporate lending portfolios and climate scenarios (<https://www.transitionmonitor.com/>). Financial institutions use PACTA to study how their capital allocation decisions align with climate change mitigation goals. Because both financial institutions and market data providers keep their data private, this package provides fake, public data to enable the development and use of PACTA in R.

r-fourscores 1.5.1
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=FourScores
Licenses: GPL 3
Synopsis: Game for Human vs. Human or Human vs. AI
Description:

This package provides a game for two players: Who gets first four in a row (horizontal, vertical or diagonal) wins. As board game published by Milton Bradley, designed by Howard Wexler and Ned Strongin.

r-fabletools 0.5.1
Propagated dependencies: r-vctrs@0.6.5 r-tsibble@1.1.6 r-tidyselect@1.2.1 r-tidyr@1.3.1 r-tibble@3.2.1 r-scales@1.4.0 r-rlang@1.1.6 r-r6@2.6.1 r-progressr@0.15.1 r-lifecycle@1.0.4 r-ggplot2@3.5.2 r-ggdist@3.3.3 r-generics@0.1.4 r-dplyr@1.1.4 r-distributional@0.5.0
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://fabletools.tidyverts.org/
Licenses: GPL 3
Synopsis: Core Tools for Packages in the 'fable' Framework
Description:

This package provides tools, helpers and data structures for developing models and time series functions for fable and extension packages. These tools support a consistent and tidy interface for time series modelling and analysis.

r-image-otsu 0.1
Propagated dependencies: r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://github.com/bnosac/image
Licenses: Expat
Synopsis: Otsu's Image Segmentation Method
Description:

An implementation of the Otsu's Image Segmentation Method described in the paper: "A C++ Implementation of Otsu's Image Segmentation Method". The algorithm is explained at <doi:10.5201/ipol.2016.158>.

r-misreparma 0.0.2
Propagated dependencies: r-tseries@0.10-58 r-mixtools@2.0.0.1 r-boot@1.3-31
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=MisRepARMA
Licenses: GPL 2+
Synopsis: Misreported Time Series Analysis
Description:

This package provides a simple and trustworthy methodology for the analysis of misreported continuous time series. See Moriña, D, Fernández-Fontelo, A, Cabaña, A, Puig P. (2021) <arXiv:2003.09202v2>.

r-neo4jshell 0.1.2
Propagated dependencies: r-sys@3.4.3 r-ssh@0.9.4 r-r-utils@2.13.0 r-magrittr@2.0.3 r-fs@1.6.6
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://cran.r-project.org/package=neo4jshell
Licenses: Expat
Synopsis: Querying and Managing 'Neo4J' Databases in 'R'
Description:

Sends queries to a specified Neo4J graph database, capturing results in a dataframe where appropriate. Other useful functions for the importing and management of data on the Neo4J server and basic local server admin.

r-nonparaeff 0.5-13
Propagated dependencies: r-lpsolve@5.6.23 r-hmisc@5.2-3 r-geometry@0.5.2
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://www.r-project.org
Licenses: GPL 2+
Synopsis: Nonparametric Methods for Measuring Efficiency and Productivity
Description:

Efficiency and productivity indices are measured using this package. This package contains functions for measuring efficiency and productivity of decision making units (DMUs) under the framework of Data Envelopment Analysis (DEA) and its variations.

r-opthedging 1.0
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: http://www.r-project.org
Licenses: GPL 2+
Synopsis: Estimation of value and hedging strategy of call and put options
Description:

Estimation of value and hedging strategy of call and put options, based on optimal hedging and Monte Carlo method, from Chapter 3 of Statistical Methods for Financial Engineering', by Bruno Remillard, CRC Press, (2013).

r-omopsketch 0.5.1
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.2.1 r-stringr@1.5.1 r-rlang@1.1.6 r-purrr@1.0.4 r-patientprofiles@1.4.3 r-omopgenerics@1.3.2 r-lifecycle@1.0.4 r-glue@1.8.0 r-dplyr@1.1.4 r-cohortconstructor@0.5.0 r-clock@0.7.3 r-cli@3.6.5 r-cdmconnector@2.2.0
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://OHDSI.github.io/OmopSketch/
Licenses: FSDG-compatible
Synopsis: Characterise Tables of an OMOP Common Data Model Instance
Description:

Summarises key information in data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model. Assess suitability to perform specific epidemiological studies and explore the different domains to obtain feasibility counts and trends.

r-qtl2ggplot 1.2.6
Propagated dependencies: r-tidyr@1.3.1 r-stringr@1.5.1 r-rlang@1.1.6 r-rcpp@1.0.14 r-rcolorbrewer@1.1-3 r-qtl2@0.36 r-purrr@1.0.4 r-ggrepel@0.9.6 r-ggplot2@3.5.2 r-dplyr@1.1.4 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/q.scm (guix-cran packages q)
Home page: https://github.com/byandell-sysgen/qtl2ggplot
Licenses: GPL 3
Synopsis: Data Visualization for QTL Experiments
Description:

This package provides functions to plot QTL (quantitative trait loci) analysis results and related diagnostics. Part of qtl2', an upgrade of the qtl package to better handle high-dimensional data and complex cross designs.

r-quadcleanr 1.1.0
Propagated dependencies: r-magrittr@2.0.3
Channel: guix-cran
Location: guix-cran/packages/q.scm (guix-cran packages q)
Home page: https://github.com/DominiqueMaucieri/quadcleanR
Licenses: GPL 3+
Synopsis: Cleanup and Visualization of Quadrat Data
Description:

This package provides a tool that can be customized to aid in the clean up of ecological data collected using quadrats and can crop quadrats to ensure comparability between quadrats collected under different methodologies.

r-scrnatools 1.0
Propagated dependencies: r-tpea@3.1.0 r-survival@3.8-3 r-scatterplot3d@0.3-44 r-rtsne@0.17 r-rmisc@1.5.1 r-reshape2@1.4.4 r-plyr@1.8.9 r-performanceanalytics@2.0.8 r-limma@3.64.1 r-lattice@0.22-7 r-igraph@2.1.4 r-hmisc@5.2-3 r-ggthemes@5.1.0 r-ggplot2@3.5.2 r-foreach@1.5.2 r-edger@4.6.2 r-corrplot@0.95 r-consensusclusterplus@1.72.0 r-all@1.50.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=scRNAtools
Licenses: GPL 2
Synopsis: Single Cell RNA Sequencing Data Analysis Tools
Description:

We integrated the common analysis methods utilized in single cell RNA sequencing data, which included cluster method, principal components analysis (PCA), the filter of differentially expressed genes, pathway enrichment analysis and correlated analysis methods.

r-sfnetworks 0.6.5
Propagated dependencies: r-units@0.8-7 r-tidygraph@1.3.1 r-tibble@3.2.1 r-sfheaders@0.4.4 r-sf@1.0-21 r-rlang@1.1.6 r-lwgeom@0.2-14 r-igraph@2.1.4 r-dplyr@1.1.4 r-crayon@1.5.3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://luukvdmeer.github.io/sfnetworks/
Licenses: FSDG-compatible
Synopsis: Tidy Geospatial Networks
Description:

This package provides a tidy approach to spatial network analysis, in the form of classes and functions that enable a seamless interaction between the network analysis package tidygraph and the spatial analysis package sf'.

r-stpphawkes 0.2.2
Propagated dependencies: r-rcppprogress@0.4.2 r-rcppgsl@0.3.13 r-rcpparmadillo@14.4.3-1 r-rcpp@1.0.14 r-interp@1.1-6 r-extradistr@1.10.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/sandialabs/stpphawkes
Licenses: Expat
Synopsis: Missing Data for Marked Hawkes Process
Description:

Estimation of model parameters for marked Hawkes process. Accounts for missing data in the estimation of the parameters. Technical details found in (Tucker et al., 2019 <DOI:10.1016/j.spasta.2018.12.004>).

r-starwarsdb 0.1.3
Propagated dependencies: r-tibble@3.2.1 r-magrittr@2.0.3 r-duckdb@1.2.2 r-dbi@1.2.3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/gadenbuie/starwarsdb
Licenses: Expat
Synopsis: Relational Data from the 'Star Wars' API for Learning and Teaching
Description:

This package provides data about the Star Wars movie franchise in a set of relational tables or as a complete DuckDB database. All data was collected from the open source Star Wars API.

r-secutrialr 1.3.3
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.2.1 r-stringr@1.5.1 r-rlang@1.1.6 r-readxl@1.4.5 r-readr@2.1.5 r-purrr@1.0.4 r-magrittr@2.0.3 r-lubridate@1.9.4 r-haven@2.5.5 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/SwissClinicalTrialOrganisation/secuTrialR
Licenses: Expat
Synopsis: Handling of Data from the Clinical Data Management System 'secuTrial'
Description:

Seamless and standardized interaction with data exported from the clinical data management system (CDMS) secuTrial'<https://www.secutrial.com>. The primary data export the package works with is a standard non-rectangular export.

r-trustoptim 0.8.7.3
Propagated dependencies: r-rcppeigen@0.3.4.0.2 r-rcpp@1.0.14 r-matrix@1.7-3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://braunm.github.io/trustOptim/
Licenses: FSDG-compatible
Synopsis: Trust Region Optimization for Nonlinear Functions with Sparse Hessians
Description:

Trust region algorithm for nonlinear optimization. Efficient when the Hessian of the objective function is sparse (i.e., relatively few nonzero cross-partial derivatives). See Braun, M. (2014) <doi:10.18637/jss.v060.i04>.

r-walmartapi 0.1.5
Propagated dependencies: r-tibble@3.2.1 r-stringr@1.5.1 r-purrr@1.0.4 r-magrittr@2.0.3 r-httr@1.4.7 r-glue@1.8.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/w.scm (guix-cran packages w)
Home page: https://github.com/EmilHvitfeldt/walmartAPI
Licenses: Expat
Synopsis: Walmart Open API Wrapper
Description:

This package provides API access to the Walmart Open API <https://developer.walmartlabs.com/>, that contains data about stores, Value of the day and products which includes names, sale prices, shipping rates and taxonomies.

r-fourdndata 1.8.0
Propagated dependencies: r-s4vectors@0.46.0 r-iranges@2.42.0 r-hicexperiment@1.8.0 r-genomicranges@1.60.0 r-biocfilecache@2.16.0
Channel: guix-bioc
Location: guix-bioc/packages/f.scm (guix-bioc packages f)
Home page: https://github.com/js2264/fourDNData
Licenses: Expat
Synopsis: 4DN data package
Description:

fourDNData is a data package giving programmatic access to Hi-C contact matrices uniformly processed by the [4DN consortium](https://www.4dnucleome.org/). The matrices are available in the multi-resolution `.mcool` format.

r-flowploidy 1.34.0
Propagated dependencies: r-shiny@1.10.0 r-rmarkdown@2.29 r-minpack-lm@1.2-4 r-knitr@1.50 r-flowcore@2.20.0 r-catools@1.18.3 r-car@3.1-3
Channel: guix-bioc
Location: guix-bioc/packages/f.scm (guix-bioc packages f)
Home page: https://github.com/plantarum/flowPloidy
Licenses: GPL 3
Synopsis: Analyze flow cytometer data to determine sample ploidy
Description:

Determine sample ploidy via flow cytometry histogram analysis. Reads Flow Cytometry Standard (FCS) files via the flowCore bioconductor package, and provides functions for determining the DNA ploidy of samples based on internal standards.

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