Reconstructs retinae by morphing a flat surface with cuts (a dissected flat-mount retina) onto a curvilinear surface (the standard retinal shape). It can estimate the position of a point on the intact adult retina to within 8 degrees of arc (3.6% of nasotemporal axis). The coordinates in reconstructed retinae can be transformed to visuotopic coordinates. For more details see Sterratt, D. C., Lyngholm, D., Willshaw, D. J. and Thompson, I. D. (2013) <doi:10.1371/journal.pcbi.1002921>.

Microarray quality assessment is a major concern of microarray analysts. This package provides some simple approaches to in silico creation of quality problems in CEL-level data to help evaluate performance of quality metrics.

This package provides the URL checking tools available in R 4.1+ as a package for earlier versions of R. It also uses concurrent requests so can be much faster than the serial versions.

This package provides functions for fitting the entire solution path of the Elastic-Net and also provides functions for estimating sparse Principal Components. The Lasso solution paths can be computed by the same function.

This package provides utilities to work with indices of effect size and standardized parameters for a wide variety of models, allowing computation and conversion of indices such as Cohen's d, r, odds, etc.

Relint (regular expression lint) scans Elisp files for mistakes in regexps, including deprecated syntax and bad practice. It also checks the regexp-like arguments to skip-chars-forward and skip-chars-backward.

Ranch aims to provide everything you need to accept TCP connections with a small code base and low latency while being easy to use directly as an application or to embed into your own.

Bayesian analysis for stochastic extensions of non-linear dynamic systems using advanced computational algorithms. Described in Bouranis, L., Demiris, N., Kalogeropoulos, K., and Ntzoufras, I. (2022) <doi:10.48550/arXiv.2211.15229>.

Check digits are used like file hashes to verify that a number has been transcribed accurately. The functions provided by this package help to calculate and verify check digits according to various algorithms.

This package provides a big data version for fitting cumulative probability models using the orm() function from the rms package. See Liu et al. (2017) <DOI:10.1002/sim.7433> for details.

This package provides six variants of two-way correspondence analysis (ca): simple ca, singly ordered ca, doubly ordered ca, non symmetrical ca, singly ordered non symmetrical ca, and doubly ordered non symmetrical ca.

This package provides a simple set of classes and methods for mapping between scalar intensity values and colors. There is also support for layering maps on top of one another using alpha composition.

Statistical tests and test statistics to identify events in a dataset that are dragon kings (DKs). The statistical methods in this package were reviewed in Wheatley & Sornette (2015) <doi:10.2139/ssrn.2645709>.

Extracts colonisation and branching times of island species to be used for analysis in the R package DAISIE'. It uses phylogenetic and endemicity data to extract the separate island colonists and store them.

Modified versions of the lag() and summary() functions: glag() and gsummary(). The prefix g is a reminder of who to blame if things do not work as they should.

Downloads and organizes datasets using BCB's API <https://www.bcb.gov.br/>. Offers options for caching with the memoise package and , multicore/multisession with furrr and format of output data (long/wide).

Analyzes raw abundance data from a cellular thermal shift experiment and calculates melt temperatures and melt shifts for each protein in the experiment. McCracken (2022) <doi:10.1101/2022.12.30.522131>.

Optimal testing under general dependence. The R package implements procedures proposed in Wang, Han, and Tong (2022). The package includes parameter estimation procedures, the computation for the posterior probabilities, and the testing procedure.

Fill missing symmetrical data with mirroring, calculate Procrustes alignments with or without scaling, and compute standard or vector correlation and covariance matrices (congruence coefficients) of 3D landmarks. Tolerates missing data for all analyses.

Shiny app to interactively visualize hierarchical clustering with prototypes. For details on hierarchical clustering with prototypes, see Bien and Tibshirani (2011) <doi:10.1198/jasa.2011.tm10183>. This package currently launches the application.

Access the data of the Catalogue of the Timber Forest Species of the Peruvian Amazon Vásquez Martà nez, R., & Rojas Gonzáles, R.D.P.(2022)<doi:10.21704/rfp.v37i3.1956>.

Use of Knock Out and Round Robin Techniques in preparing tournament fixtures as discussed in the Book Health and Physical Education by Dr. V K Sharma'(2018,ISBN:978-93-5272-134-4).

This package provides a pair of functions that allow for the generation and tracking of coordinate data clouds without a time dimension, primarily for use in super-resolution plant micro-tubule image segmentation.

Statistical tools based on the probabilistic properties of the record occurrence in a sequence of independent and identically distributed continuous random variables. In particular, tools to prepare a time series as well as distribution-free trend and change-point tests and graphical tools to study the record occurrence. Details about the implemented tools can be found in Castillo-Mateo et al. (2023a) <doi:10.18637/jss.v106.i05> and Castillo-Mateo et al. (2023b) <doi:10.1016/j.atmosres.2023.106934>.